Protein–RNA interactions for Protein: P49639

HOXA1, Homeobox protein Hox-A1, humanhuman

Predicted RBP Predictions only

Length 335 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1P49639 Y_RNA.16-201ENST00000362421 102 ntBASIC1.98□□□□□ -2.09
HOXA1P49639 RNU5F-3P-201ENST00000363767 117 ntBASIC1.98□□□□□ -2.09
HOXA1P49639 SNORD31B-201ENST00000364977 69 ntBASIC1.98□□□□□ -2.09
HOXA1P49639 RNU6-1175P-201ENST00000365200 107 ntBASIC1.98□□□□□ -2.09
HOXA1P49639 RNU1-51P-201ENST00000365345 176 ntBASIC1.98□□□□□ -2.09
HOXA1P49639 RNU6-438P-201ENST00000365561 103 ntBASIC1.98□□□□□ -2.09
HOXA1P49639 Y_RNA.376-201ENST00000365638 108 ntBASIC1.98□□□□□ -2.09
HOXA1P49639 RNU6-196P-201ENST00000384315 107 ntBASIC1.98□□□□□ -2.09
HOXA1P49639 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC1.98□□□□□ -2.09
HOXA1P49639 AC063976.3-201ENST00000426849 329 ntBASIC1.98□□□□□ -2.09
HOXA1P49639 AL731563.1-201ENST00000442202 214 ntBASIC1.98□□□□□ -2.09
HOXA1P49639 RNU7-57P-201ENST00000459540 60 ntBASIC1.98□□□□□ -2.09
HOXA1P49639 AC010531.2-201ENST00000465012 153 ntBASIC1.98□□□□□ -2.09
HOXA1P49639 AC074133.1-201ENST00000515696 183 ntBASIC1.98□□□□□ -2.09
HOXA1P49639 RNU7-110P-201ENST00000516891 62 ntBASIC1.98□□□□□ -2.09
HOXA1P49639 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC1.98□□□□□ -2.09
HOXA1P49639 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.98□□□□□ -2.09
HOXA1P49639 MIR4753-201ENST00000585119 83 ntBASIC1.98□□□□□ -2.09
HOXA1P49639 AC013412.1-201ENST00000610687 192 ntBASIC1.98□□□□□ -2.09
HOXA1P49639 DLEU1_1.1-201ENST00000618107 190 ntBASIC1.98□□□□□ -2.09
HOXA1P49639 MIR3674-201ENST00000636576 68 ntBASIC1.98□□□□□ -2.09
HOXA1P49639 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
HOXA1P49639 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
HOXA1P49639 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
HOXA1P49639 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC1.97□□□□□ -2.09
HOXA1P49639 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.97□□□□□ -2.09
HOXA1P49639 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
HOXA1P49639 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC1.97□□□□□ -2.09
HOXA1P49639 Y_RNA.276-201ENST00000364732 109 ntBASIC1.97□□□□□ -2.09
HOXA1P49639 RNU1-91P-201ENST00000364746 163 ntBASIC1.97□□□□□ -2.09
HOXA1P49639 RNA5SP138-201ENST00000365098 114 ntBASIC1.97□□□□□ -2.09
HOXA1P49639 RNU6-472P-201ENST00000384299 107 ntBASIC1.97□□□□□ -2.09
HOXA1P49639 Y_RNA.570-201ENST00000384750 101 ntBASIC1.97□□□□□ -2.09
HOXA1P49639 RNU6-713P-201ENST00000384761 107 ntBASIC1.97□□□□□ -2.09
HOXA1P49639 MIR128-1-201ENST00000384921 82 ntBASIC1.97□□□□□ -2.09
HOXA1P49639 MIR586-201ENST00000385035 97 ntBASIC1.97□□□□□ -2.09
HOXA1P49639 SNORA48.2-201ENST00000390926 124 ntBASIC1.97□□□□□ -2.09
HOXA1P49639 SNORD115-46-201ENST00000390982 71 ntBASIC1.97□□□□□ -2.09
HOXA1P49639 AL357139.1-201ENST00000407792 426 ntBASIC1.97□□□□□ -2.09
HOXA1P49639 SNORD23.1-201ENST00000408212 104 ntBASIC1.97□□□□□ -2.09
HOXA1P49639 RNU6-57P-201ENST00000411348 103 ntBASIC1.97□□□□□ -2.09
HOXA1P49639 Z92545.1-201ENST00000411782 234 ntBASIC1.97□□□□□ -2.09
HOXA1P49639 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC1.97□□□□□ -2.09
HOXA1P49639 AC139712.2-201ENST00000424302 339 ntBASIC1.97□□□□□ -2.09
HOXA1P49639 AC016925.1-201ENST00000458303 298 ntBASIC1.97□□□□□ -2.09
HOXA1P49639 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC1.97□□□□□ -2.09
HOXA1P49639 Y_RNA.713-201ENST00000517013 96 ntBASIC1.97□□□□□ -2.09
HOXA1P49639 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC1.97□□□□□ -2.09
HOXA1P49639 U4.3-201ENST00000621047 82 ntBASIC1.97□□□□□ -2.09
HOXA1P49639 7SK.10-201ENST00000621414 298 ntBASIC1.97□□□□□ -2.09
HOXA1P49639 MIR8062-201ENST00000621515 85 ntBASIC1.97□□□□□ -2.09
HOXA1P49639 LINC02555-201ENST00000563933 1951 ntBASIC1.97□□□□□ -2.09
HOXA1P49639 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
HOXA1P49639 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
HOXA1P49639 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
HOXA1P49639 RNA5SP68-201ENST00000363885 119 ntBASIC1.96□□□□□ -2.1
HOXA1P49639 RNA5SP456-201ENST00000364002 114 ntBASIC1.96□□□□□ -2.1
HOXA1P49639 SNORA72.2-201ENST00000365028 127 ntBASIC1.96□□□□□ -2.1
HOXA1P49639 Y_RNA.461-201ENST00000384263 103 ntBASIC1.96□□□□□ -2.1
HOXA1P49639 RNU6-463P-201ENST00000384340 107 ntBASIC1.96□□□□□ -2.1
HOXA1P49639 RNU1-148P-201ENST00000384472 162 ntBASIC1.96□□□□□ -2.1
HOXA1P49639 Y_RNA.541-201ENST00000384640 113 ntBASIC1.96□□□□□ -2.1
HOXA1P49639 MIR17-201ENST00000385012 84 ntBASIC1.96□□□□□ -2.1
HOXA1P49639 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
HOXA1P49639 RNU6-1199P-201ENST00000411249 104 ntBASIC1.96□□□□□ -2.1
HOXA1P49639 SNORD109B-201ENST00000458961 67 ntBASIC1.96□□□□□ -2.1
HOXA1P49639 SNORD109A-201ENST00000459128 67 ntBASIC1.96□□□□□ -2.1
HOXA1P49639 HMGB3P17-201ENST00000504195 649 ntBASIC1.96□□□□□ -2.1
HOXA1P49639 AC025465.3-201ENST00000510570 311 ntBASIC1.96□□□□□ -2.1
HOXA1P49639 AC027419.1-201ENST00000522976 328 ntBASIC1.96□□□□□ -2.1
HOXA1P49639 MIR3145-201ENST00000580727 82 ntBASIC1.96□□□□□ -2.1
HOXA1P49639 MIR4423-201ENST00000580922 80 ntBASIC1.96□□□□□ -2.1
HOXA1P49639 AC008749.1-201ENST00000597650 306 ntBASIC1.96□□□□□ -2.1
HOXA1P49639 RPL17P51-201ENST00000605218 238 ntBASIC1.96□□□□□ -2.1
HOXA1P49639 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.96□□□□□ -2.1
HOXA1P49639 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.96□□□□□ -2.1
HOXA1P49639 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
HOXA1P49639 AC245060.5-201ENST00000610778 3293 ntBASIC1.95□□□□□ -2.1
HOXA1P49639 Y_RNA.84-201ENST00000363011 104 ntBASIC1.95□□□□□ -2.1
HOXA1P49639 SNORD81.1-201ENST00000363064 77 ntBASIC1.95□□□□□ -2.1
HOXA1P49639 U3.8-201ENST00000363675 217 ntBASIC1.95□□□□□ -2.1
HOXA1P49639 Y_RNA.193-201ENST00000363979 102 ntBASIC1.95□□□□□ -2.1
HOXA1P49639 SNORD114-6-201ENST00000364393 72 ntBASIC1.95□□□□□ -2.1
HOXA1P49639 RNU6-1264P-201ENST00000383891 107 ntBASIC1.95□□□□□ -2.1
HOXA1P49639 Y_RNA.446-201ENST00000384178 104 ntBASIC1.95□□□□□ -2.1
HOXA1P49639 MIR300-201ENST00000401138 83 ntBASIC1.95□□□□□ -2.1
HOXA1P49639 RNA5SP475-201ENST00000410568 110 ntBASIC1.95□□□□□ -2.1
HOXA1P49639 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.95□□□□□ -2.1
HOXA1P49639 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.95□□□□□ -2.1
HOXA1P49639 AL137159.1-201ENST00000452808 512 ntBASIC1.95□□□□□ -2.1
HOXA1P49639 HSPE1P25-201ENST00000455484 251 ntBASIC1.95□□□□□ -2.1
HOXA1P49639 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.95□□□□□ -2.1
HOXA1P49639 RNU6-155P-201ENST00000516347 100 ntBASIC1.95□□□□□ -2.1
HOXA1P49639 RNA5SP364-201ENST00000516938 78 ntBASIC1.95□□□□□ -2.1
HOXA1P49639 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.95□□□□□ -2.1
HOXA1P49639 AL161670.1-201ENST00000554348 137 ntBASIC1.95□□□□□ -2.1
HOXA1P49639 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC1.95□□□□□ -2.1
HOXA1P49639 SNORD14A-201ENST00000606526 91 ntBASIC1.95□□□□□ -2.1
HOXA1P49639 AC011373.1-201ENST00000607270 237 ntBASIC1.95□□□□□ -2.1
HOXA1P49639 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.95□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 139.7 ms