Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 Y_RNA.238-201ENST00000364441 102 ntBASIC1.74□□□□□ -2.13
NEDD4P46934 RNU6-99P-201ENST00000364721 107 ntBASIC1.74□□□□□ -2.13
NEDD4P46934 RNU6-867P-201ENST00000364956 107 ntBASIC1.74□□□□□ -2.13
NEDD4P46934 RNU6-975P-201ENST00000384296 105 ntBASIC1.74□□□□□ -2.13
NEDD4P46934 SNORD116-29-201ENST00000384516 83 ntBASIC1.74□□□□□ -2.13
NEDD4P46934 MIR625-201ENST00000385047 85 ntBASIC1.74□□□□□ -2.13
NEDD4P46934 MIR517C-201ENST00000385103 95 ntBASIC1.74□□□□□ -2.13
NEDD4P46934 SNORA67.6-201ENST00000391093 99 ntBASIC1.74□□□□□ -2.13
NEDD4P46934 AC022028.1-201ENST00000412054 408 ntBASIC1.74□□□□□ -2.13
NEDD4P46934 RPL23AP36-201ENST00000413895 458 ntBASIC1.74□□□□□ -2.13
NEDD4P46934 AC139712.2-201ENST00000424302 339 ntBASIC1.74□□□□□ -2.13
NEDD4P46934 AC092423.1-201ENST00000430165 186 ntBASIC1.74□□□□□ -2.13
NEDD4P46934 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.74□□□□□ -2.13
NEDD4P46934 NDUFB4P10-201ENST00000452541 359 ntBASIC1.74□□□□□ -2.13
NEDD4P46934 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.74□□□□□ -2.13
NEDD4P46934 MTCO3P10-201ENST00000455912 772 ntBASIC1.74□□□□□ -2.13
NEDD4P46934 RNU7-4P-201ENST00000516961 62 ntBASIC1.74□□□□□ -2.13
NEDD4P46934 AC091144.1-201ENST00000519573 138 ntBASIC1.74□□□□□ -2.13
NEDD4P46934 UBL5P4-201ENST00000562584 236 ntBASIC1.74□□□□□ -2.13
NEDD4P46934 CYP2C61P-201ENST00000604072 290 ntBASIC1.74□□□□□ -2.13
NEDD4P46934 AC080078.3-201ENST00000605407 463 ntBASIC1.74□□□□□ -2.13
NEDD4P46934 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.74□□□□□ -2.13
NEDD4P46934 AC010999.1-201ENST00000611856 324 ntBASIC1.74□□□□□ -2.13
NEDD4P46934 AC084781.2-201ENST00000615568 161 ntBASIC1.74□□□□□ -2.13
NEDD4P46934 U1.36-201ENST00000620684 176 ntBASIC1.74□□□□□ -2.13
NEDD4P46934 AL078596.1-201ENST00000624856 447 ntBASIC1.74□□□□□ -2.13
NEDD4P46934 AC068205.3-201ENST00000636385 468 ntBASIC1.74□□□□□ -2.13
NEDD4P46934 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.74□□□□□ -2.13
NEDD4P46934 AC112487.2-201ENST00000637950 304 ntBASIC1.74□□□□□ -2.13
NEDD4P46934 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
NEDD4P46934 Y_RNA.67-201ENST00000362870 100 ntBASIC1.73□□□□□ -2.13
NEDD4P46934 SNORD114-6-201ENST00000364393 72 ntBASIC1.73□□□□□ -2.13
NEDD4P46934 Y_RNA.557-201ENST00000384680 107 ntBASIC1.73□□□□□ -2.13
NEDD4P46934 RNU6-1156P-201ENST00000410365 100 ntBASIC1.73□□□□□ -2.13
NEDD4P46934 RNA5SP450-201ENST00000411206 102 ntBASIC1.73□□□□□ -2.13
NEDD4P46934 EIF1P2-201ENST00000428233 350 ntBASIC1.73□□□□□ -2.13
NEDD4P46934 RNU7-152P-201ENST00000458982 64 ntBASIC1.73□□□□□ -2.13
NEDD4P46934 HMGN2P9-201ENST00000476875 229 ntBASIC1.73□□□□□ -2.13
NEDD4P46934 SNORA31.24-201ENST00000517232 57 ntBASIC1.73□□□□□ -2.13
NEDD4P46934 MIR3169-201ENST00000578032 83 ntBASIC1.73□□□□□ -2.13
NEDD4P46934 MIR5695-201ENST00000579717 85 ntBASIC1.73□□□□□ -2.13
NEDD4P46934 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.73□□□□□ -2.13
NEDD4P46934 snoU13.31-201ENST00000607291 104 ntBASIC1.73□□□□□ -2.13
NEDD4P46934 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
NEDD4P46934 U3.8-201ENST00000363675 217 ntBASIC1.72□□□□□ -2.13
NEDD4P46934 RNU6-1235P-201ENST00000384559 107 ntBASIC1.72□□□□□ -2.13
NEDD4P46934 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
NEDD4P46934 AL033519.2-201ENST00000403958 392 ntBASIC1.72□□□□□ -2.13
NEDD4P46934 RNU6-1304P-201ENST00000411374 106 ntBASIC1.72□□□□□ -2.13
NEDD4P46934 AC099799.1-201ENST00000439809 192 ntBASIC1.72□□□□□ -2.13
NEDD4P46934 MIR2053-201ENST00000459295 91 ntBASIC1.72□□□□□ -2.13
NEDD4P46934 RNU7-87P-201ENST00000459343 62 ntBASIC1.72□□□□□ -2.13
NEDD4P46934 RNU6-498P-201ENST00000459468 107 ntBASIC1.72□□□□□ -2.13
NEDD4P46934 AC010531.2-201ENST00000465012 153 ntBASIC1.72□□□□□ -2.13
NEDD4P46934 AC091179.3-201ENST00000474761 144 ntBASIC1.72□□□□□ -2.13
NEDD4P46934 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.72□□□□□ -2.13
NEDD4P46934 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC1.72□□□□□ -2.13
NEDD4P46934 AC108729.3-201ENST00000513484 108 ntBASIC1.72□□□□□ -2.13
NEDD4P46934 RNA5SP61-201ENST00000516453 100 ntBASIC1.72□□□□□ -2.13
NEDD4P46934 AC144568.1-201ENST00000520139 137 ntBASIC1.72□□□□□ -2.13
NEDD4P46934 RAB11AP2-201ENST00000545905 639 ntBASIC1.72□□□□□ -2.13
NEDD4P46934 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.72□□□□□ -2.13
NEDD4P46934 AC005786.1-201ENST00000588553 154 ntBASIC1.72□□□□□ -2.13
NEDD4P46934 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC1.72□□□□□ -2.13
NEDD4P46934 AL590240.4-201ENST00000616908 390 ntBASIC1.72□□□□□ -2.13
NEDD4P46934 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
NEDD4P46934 RNU6-874P-201ENST00000362390 105 ntBASIC1.71□□□□□ -2.14
NEDD4P46934 RNU6-222P-201ENST00000362438 107 ntBASIC1.71□□□□□ -2.14
NEDD4P46934 Y_RNA.146-201ENST00000363549 102 ntBASIC1.71□□□□□ -2.14
NEDD4P46934 RNU5E-4P-201ENST00000364931 120 ntBASIC1.71□□□□□ -2.14
NEDD4P46934 Y_RNA.358-201ENST00000365491 99 ntBASIC1.71□□□□□ -2.14
NEDD4P46934 RNU6-1040P-201ENST00000383974 107 ntBASIC1.71□□□□□ -2.14
NEDD4P46934 RNU6-418P-201ENST00000384035 107 ntBASIC1.71□□□□□ -2.14
NEDD4P46934 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
NEDD4P46934 RNA5SP247-201ENST00000411181 105 ntBASIC1.71□□□□□ -2.14
NEDD4P46934 RPS20P15-201ENST00000412792 311 ntBASIC1.71□□□□□ -2.14
NEDD4P46934 AC114482.1-201ENST00000418010 247 ntBASIC1.71□□□□□ -2.14
NEDD4P46934 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC1.71□□□□□ -2.14
NEDD4P46934 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC1.71□□□□□ -2.14
NEDD4P46934 CEP57L1P1-201ENST00000430943 1201 ntBASIC1.71□□□□□ -2.14
NEDD4P46934 RNU7-57P-201ENST00000459540 60 ntBASIC1.71□□□□□ -2.14
NEDD4P46934 Y_RNA.683-201ENST00000516508 93 ntBASIC1.71□□□□□ -2.14
NEDD4P46934 RNU6-856P-201ENST00000516959 98 ntBASIC1.71□□□□□ -2.14
NEDD4P46934 AC093023.1-201ENST00000547375 507 ntBASIC1.71□□□□□ -2.14
NEDD4P46934 MIR4795-201ENST00000584182 89 ntBASIC1.71□□□□□ -2.14
NEDD4P46934 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
NEDD4P46934 AL117336.2-201ENST00000602435 335 ntBASIC1.71□□□□□ -2.14
NEDD4P46934 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.7□□□□□ -2.14
NEDD4P46934 RNU4-79P-201ENST00000362764 141 ntBASIC1.7□□□□□ -2.14
NEDD4P46934 Y_RNA.431-201ENST00000384086 102 ntBASIC1.7□□□□□ -2.14
NEDD4P46934 AL512604.1-201ENST00000404812 257 ntBASIC1.7□□□□□ -2.14
NEDD4P46934 Y_RNA.604-201ENST00000410574 102 ntBASIC1.7□□□□□ -2.14
NEDD4P46934 RNA5SP504-201ENST00000410676 117 ntBASIC1.7□□□□□ -2.14
NEDD4P46934 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC1.7□□□□□ -2.14
NEDD4P46934 RNU6-1053P-201ENST00000515930 101 ntBASIC1.7□□□□□ -2.14
NEDD4P46934 Y_RNA.673-201ENST00000516306 88 ntBASIC1.7□□□□□ -2.14
NEDD4P46934 Y_RNA.675-201ENST00000516389 149 ntBASIC1.7□□□□□ -2.14
NEDD4P46934 AP005660.1-201ENST00000522972 293 ntBASIC1.7□□□□□ -2.14
NEDD4P46934 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.7□□□□□ -2.14
NEDD4P46934 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC1.7□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 225.4 ms