Protein–RNA interactions for Protein: P41225

SOX3, Transcription factor SOX-3, humanhuman

Predictions only

Length 446 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX3P41225 MIR583-201ENST00000384846 75 ntBASIC1.77□□□□□ -2.13
SOX3P41225 U8.13-201ENST00000390842 128 ntBASIC1.77□□□□□ -2.13
SOX3P41225 MIR1283-2-201ENST00000408621 87 ntBASIC1.77□□□□□ -2.13
SOX3P41225 RNU2-20P-201ENST00000410425 191 ntBASIC1.77□□□□□ -2.13
SOX3P41225 RNU6-1001P-201ENST00000411265 100 ntBASIC1.77□□□□□ -2.13
SOX3P41225 BX510359.4-201ENST00000423750 193 ntBASIC1.77□□□□□ -2.13
SOX3P41225 AC139712.2-201ENST00000424302 339 ntBASIC1.77□□□□□ -2.13
SOX3P41225 MTCYBP6-201ENST00000441810 138 ntBASIC1.77□□□□□ -2.13
SOX3P41225 AL357134.1-201ENST00000445848 426 ntBASIC1.77□□□□□ -2.13
SOX3P41225 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.77□□□□□ -2.13
SOX3P41225 AC114982.1-201ENST00000469402 321 ntBASIC1.77□□□□□ -2.13
SOX3P41225 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.77□□□□□ -2.13
SOX3P41225 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.77□□□□□ -2.13
SOX3P41225 RNU6-948P-201ENST00000516374 107 ntBASIC1.77□□□□□ -2.13
SOX3P41225 RNU2-34P-201ENST00000516534 121 ntBASIC1.77□□□□□ -2.13
SOX3P41225 RN7SKP49-201ENST00000516675 260 ntBASIC1.77□□□□□ -2.13
SOX3P41225 RNU1-117P-201ENST00000517041 158 ntBASIC1.77□□□□□ -2.13
SOX3P41225 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
SOX3P41225 AK6P2-201ENST00000549020 471 ntBASIC1.77□□□□□ -2.13
SOX3P41225 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.77□□□□□ -2.13
SOX3P41225 MIR3124-201ENST00000582636 67 ntBASIC1.77□□□□□ -2.13
SOX3P41225 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC1.77□□□□□ -2.13
SOX3P41225 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.77□□□□□ -2.13
SOX3P41225 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
SOX3P41225 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
SOX3P41225 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.76□□□□□ -2.13
SOX3P41225 RNA5SP493-201ENST00000364115 91 ntBASIC1.76□□□□□ -2.13
SOX3P41225 Y_RNA.415-201ENST00000384012 112 ntBASIC1.76□□□□□ -2.13
SOX3P41225 Y_RNA.595-201ENST00000410403 105 ntBASIC1.76□□□□□ -2.13
SOX3P41225 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.76□□□□□ -2.13
SOX3P41225 RNU7-169P-201ENST00000459456 61 ntBASIC1.76□□□□□ -2.13
SOX3P41225 RPL23AP42-201ENST00000471152 471 ntBASIC1.76□□□□□ -2.13
SOX3P41225 Y_RNA.661-201ENST00000516003 99 ntBASIC1.76□□□□□ -2.13
SOX3P41225 RNU2-19P-201ENST00000517288 84 ntBASIC1.76□□□□□ -2.13
SOX3P41225 AC020661.2-201ENST00000560114 134 ntBASIC1.76□□□□□ -2.13
SOX3P41225 MIR3169-201ENST00000578032 83 ntBASIC1.76□□□□□ -2.13
SOX3P41225 MIR4529-201ENST00000578110 78 ntBASIC1.76□□□□□ -2.13
SOX3P41225 AC044792.1-201ENST00000593294 196 ntBASIC1.76□□□□□ -2.13
SOX3P41225 AC008749.1-201ENST00000597650 306 ntBASIC1.76□□□□□ -2.13
SOX3P41225 AL356055.1-201ENST00000602528 446 ntBASIC1.76□□□□□ -2.13
SOX3P41225 AC092447.9-201ENST00000603395 144 ntBASIC1.76□□□□□ -2.13
SOX3P41225 U2.1-201ENST00000618978 145 ntBASIC1.76□□□□□ -2.13
SOX3P41225 AC130454.1-201ENST00000622948 401 ntBASIC1.76□□□□□ -2.13
SOX3P41225 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.76□□□□□ -2.13
SOX3P41225 AL078596.1-201ENST00000624856 447 ntBASIC1.76□□□□□ -2.13
SOX3P41225 CENPCP1-201ENST00000533085 2578 ntBASIC1.75□□□□□ -2.13
SOX3P41225 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.75□□□□□ -2.13
SOX3P41225 RNA5SP361-201ENST00000362686 118 ntBASIC1.75□□□□□ -2.13
SOX3P41225 U3.8-201ENST00000363675 217 ntBASIC1.75□□□□□ -2.13
SOX3P41225 SNORD87-201ENST00000364849 89 ntBASIC1.75□□□□□ -2.13
SOX3P41225 RNU6-1235P-201ENST00000384559 107 ntBASIC1.75□□□□□ -2.13
SOX3P41225 MIR548B-201ENST00000385247 97 ntBASIC1.75□□□□□ -2.13
SOX3P41225 RNU11-3P-201ENST00000391111 133 ntBASIC1.75□□□□□ -2.13
SOX3P41225 SNORA40.18-201ENST00000391200 128 ntBASIC1.75□□□□□ -2.13
SOX3P41225 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC1.75□□□□□ -2.13
SOX3P41225 PMCHL1-202ENST00000423102 261 ntBASIC1.75□□□□□ -2.13
SOX3P41225 AL591806.2-201ENST00000433122 173 ntBASIC1.75□□□□□ -2.13
SOX3P41225 AC003989.2-201ENST00000440224 169 ntBASIC1.75□□□□□ -2.13
SOX3P41225 AC074290.1-201ENST00000448883 135 ntBASIC1.75□□□□□ -2.13
SOX3P41225 PCNPP5-201ENST00000452246 481 ntBASIC1.75□□□□□ -2.13
SOX3P41225 RNU6-498P-201ENST00000459468 107 ntBASIC1.75□□□□□ -2.13
SOX3P41225 RNU7-57P-201ENST00000459540 60 ntBASIC1.75□□□□□ -2.13
SOX3P41225 AC055731.1-201ENST00000474387 401 ntBASIC1.75□□□□□ -2.13
SOX3P41225 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.75□□□□□ -2.13
SOX3P41225 RNU6-295P-201ENST00000516901 104 ntBASIC1.75□□□□□ -2.13
SOX3P41225 AL442163.3-201ENST00000554110 156 ntBASIC1.75□□□□□ -2.13
SOX3P41225 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.75□□□□□ -2.13
SOX3P41225 AC007229.1-201ENST00000590455 412 ntBASIC1.75□□□□□ -2.13
SOX3P41225 MIR6845-201ENST00000613182 61 ntBASIC1.75□□□□□ -2.13
SOX3P41225 AL590240.4-201ENST00000616908 390 ntBASIC1.75□□□□□ -2.13
SOX3P41225 MIR4272-201ENST00000635924 64 ntBASIC1.75□□□□□ -2.13
SOX3P41225 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC1.75□□□□□ -2.13
SOX3P41225 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.75□□□□□ -2.13
SOX3P41225 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.75□□□□□ -2.13
SOX3P41225 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
SOX3P41225 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.74□□□□□ -2.13
SOX3P41225 RNU4-76P-201ENST00000364509 141 ntBASIC1.74□□□□□ -2.13
SOX3P41225 RNY1P14-201ENST00000384426 108 ntBASIC1.74□□□□□ -2.13
SOX3P41225 MIR17-201ENST00000385012 84 ntBASIC1.74□□□□□ -2.13
SOX3P41225 MIR764-201ENST00000390811 85 ntBASIC1.74□□□□□ -2.13
SOX3P41225 RNA5SP465-201ENST00000391195 109 ntBASIC1.74□□□□□ -2.13
SOX3P41225 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
SOX3P41225 HMGN2P19-201ENST00000425149 265 ntBASIC1.74□□□□□ -2.13
SOX3P41225 AC096644.2-201ENST00000429278 159 ntBASIC1.74□□□□□ -2.13
SOX3P41225 AC016717.1-201ENST00000448918 286 ntBASIC1.74□□□□□ -2.13
SOX3P41225 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC1.74□□□□□ -2.13
SOX3P41225 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.74□□□□□ -2.13
SOX3P41225 AC074133.1-201ENST00000515696 183 ntBASIC1.74□□□□□ -2.13
SOX3P41225 RNA5SP182-201ENST00000516064 82 ntBASIC1.74□□□□□ -2.13
SOX3P41225 RNU4-77P-201ENST00000516692 156 ntBASIC1.74□□□□□ -2.13
SOX3P41225 RNU6-856P-201ENST00000516959 98 ntBASIC1.74□□□□□ -2.13
SOX3P41225 VN1R91P-201ENST00000594377 169 ntBASIC1.74□□□□□ -2.13
SOX3P41225 AL357075.2-201ENST00000614906 189 ntBASIC1.74□□□□□ -2.13
SOX3P41225 AL162373.1-201ENST00000620433 407 ntBASIC1.74□□□□□ -2.13
SOX3P41225 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.74□□□□□ -2.13
SOX3P41225 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
SOX3P41225 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
SOX3P41225 Y_RNA.39-201ENST00000362620 98 ntBASIC1.73□□□□□ -2.13
SOX3P41225 Y_RNA.80-201ENST00000362996 102 ntBASIC1.73□□□□□ -2.13
SOX3P41225 RNU6-23P-201ENST00000363283 107 ntBASIC1.73□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 124.3 ms