Protein–RNA interactions for Protein: P41002

CCNF, Cyclin-F, humanhuman

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNFP41002 RNU6-975P-201ENST00000384296 105 ntBASIC3.24□□□□□ -1.89
CCNFP41002 SNORA46-201ENST00000384762 135 ntBASIC3.24□□□□□ -1.89
CCNFP41002 MIR490-201ENST00000384865 128 ntBASIC3.24□□□□□ -1.89
CCNFP41002 SNORA48.5-201ENST00000391143 135 ntBASIC3.24□□□□□ -1.89
CCNFP41002 FO393413.1-201ENST00000402892 195 ntBASIC3.24□□□□□ -1.89
CCNFP41002 AL606753.1-201ENST00000427435 87 ntBASIC3.24□□□□□ -1.89
CCNFP41002 CYP2C59P-201ENST00000457790 269 ntBASIC3.24□□□□□ -1.89
CCNFP41002 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC3.24□□□□□ -1.89
CCNFP41002 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.24□□□□□ -1.89
CCNFP41002 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC3.24□□□□□ -1.89
CCNFP41002 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC3.24□□□□□ -1.89
CCNFP41002 MIR3684-201ENST00000579779 74 ntBASIC3.24□□□□□ -1.89
CCNFP41002 AC108706.1-201ENST00000611053 297 ntBASIC3.24□□□□□ -1.89
CCNFP41002 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC3.24□□□□□ -1.89
CCNFP41002 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC3.24□□□□□ -1.89
CCNFP41002 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
CCNFP41002 Y_RNA.121-201ENST00000363309 113 ntBASIC3.23□□□□□ -1.89
CCNFP41002 RNU6-312P-201ENST00000364629 107 ntBASIC3.23□□□□□ -1.89
CCNFP41002 Y_RNA.441-201ENST00000384123 112 ntBASIC3.23□□□□□ -1.89
CCNFP41002 MIR518C-201ENST00000384822 101 ntBASIC3.23□□□□□ -1.89
CCNFP41002 RNU6-381P-201ENST00000391259 108 ntBASIC3.23□□□□□ -1.89
CCNFP41002 RNU2-32P-201ENST00000411193 191 ntBASIC3.23□□□□□ -1.89
CCNFP41002 AC244505.4-201ENST00000434905 287 ntBASIC3.23□□□□□ -1.89
CCNFP41002 SSXP5-201ENST00000443473 287 ntBASIC3.23□□□□□ -1.89
CCNFP41002 AC010409.1-201ENST00000487382 476 ntBASIC3.23□□□□□ -1.89
CCNFP41002 AC117454.1-201ENST00000491120 168 ntBASIC3.23□□□□□ -1.89
CCNFP41002 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC3.23□□□□□ -1.89
CCNFP41002 RNU6-1007P-201ENST00000516586 107 ntBASIC3.23□□□□□ -1.89
CCNFP41002 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.23□□□□□ -1.89
CCNFP41002 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
CCNFP41002 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.23□□□□□ -1.89
CCNFP41002 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
CCNFP41002 MIR7975-201ENST00000619350 68 ntBASIC3.23□□□□□ -1.89
CCNFP41002 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CCNFP41002 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CCNFP41002 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.23□□□□□ -1.89
CCNFP41002 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.23□□□□□ -1.89
CCNFP41002 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
CCNFP41002 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
CCNFP41002 RNA5SP240-201ENST00000365355 128 ntBASIC3.22□□□□□ -1.89
CCNFP41002 RNY1P5-201ENST00000383890 115 ntBASIC3.22□□□□□ -1.89
CCNFP41002 RNU6-969P-201ENST00000383900 105 ntBASIC3.22□□□□□ -1.89
CCNFP41002 MIR626-201ENST00000385032 94 ntBASIC3.22□□□□□ -1.89
CCNFP41002 MIR873-201ENST00000401120 77 ntBASIC3.22□□□□□ -1.89
CCNFP41002 AL353705.1-201ENST00000433468 480 ntBASIC3.22□□□□□ -1.89
CCNFP41002 AL161788.1-201ENST00000441805 169 ntBASIC3.22□□□□□ -1.89
CCNFP41002 UQCRHP3-201ENST00000451503 251 ntBASIC3.22□□□□□ -1.89
CCNFP41002 SNORD65B-201ENST00000459126 73 ntBASIC3.22□□□□□ -1.89
CCNFP41002 RN7SKP164-201ENST00000516138 266 ntBASIC3.22□□□□□ -1.89
CCNFP41002 RNU6-1337P-201ENST00000516525 95 ntBASIC3.22□□□□□ -1.89
CCNFP41002 RNA5SP490-201ENST00000517141 136 ntBASIC3.22□□□□□ -1.89
CCNFP41002 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.22□□□□□ -1.89
CCNFP41002 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC3.22□□□□□ -1.89
CCNFP41002 MIR5195-201ENST00000583555 115 ntBASIC3.22□□□□□ -1.89
CCNFP41002 MIR1248-201ENST00000629190 106 ntBASIC3.22□□□□□ -1.89
CCNFP41002 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC3.22□□□□□ -1.89
CCNFP41002 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
CCNFP41002 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.22□□□□□ -1.89
CCNFP41002 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.22□□□□□ -1.89
CCNFP41002 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
CCNFP41002 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.21□□□□□ -1.9
CCNFP41002 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
CCNFP41002 Y_RNA.75-201ENST00000362927 97 ntBASIC3.21□□□□□ -1.9
CCNFP41002 RNU6-461P-201ENST00000364195 107 ntBASIC3.21□□□□□ -1.9
CCNFP41002 snoU2_19.4-201ENST00000364329 80 ntBASIC3.21□□□□□ -1.9
CCNFP41002 Y_RNA.361-201ENST00000365515 120 ntBASIC3.21□□□□□ -1.9
CCNFP41002 RNU6-449P-201ENST00000383914 107 ntBASIC3.21□□□□□ -1.9
CCNFP41002 RNU6-546P-201ENST00000383991 107 ntBASIC3.21□□□□□ -1.9
CCNFP41002 MIR613-201ENST00000385248 95 ntBASIC3.21□□□□□ -1.9
CCNFP41002 NDUFB4P4-201ENST00000404822 243 ntBASIC3.21□□□□□ -1.9
CCNFP41002 AL355497.1-201ENST00000406262 551 ntBASIC3.21□□□□□ -1.9
CCNFP41002 Z82209.1-201ENST00000422141 2135 ntBASIC3.21□□□□□ -1.9
CCNFP41002 RPL23AP7-203ENST00000449021 469 ntBASIC3.21□□□□□ -1.9
CCNFP41002 EEF1B2P7-201ENST00000451177 676 ntBASIC3.21□□□□□ -1.9
CCNFP41002 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC3.21□□□□□ -1.9
CCNFP41002 AC245047.8-201ENST00000456455 284 ntBASIC3.21□□□□□ -1.9
CCNFP41002 RNU6-221P-201ENST00000459541 99 ntBASIC3.21□□□□□ -1.9
CCNFP41002 RNU6-948P-201ENST00000516374 107 ntBASIC3.21□□□□□ -1.9
CCNFP41002 AC018630.3-201ENST00000542637 96 ntBASIC3.21□□□□□ -1.9
CCNFP41002 MIR4744-201ENST00000581563 82 ntBASIC3.21□□□□□ -1.9
CCNFP41002 MTND1P7-201ENST00000632801 297 ntBASIC3.21□□□□□ -1.9
CCNFP41002 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC3.21□□□□□ -1.9
CCNFP41002 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
CCNFP41002 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
CCNFP41002 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
CCNFP41002 MIR367-201ENST00000362299 68 ntBASIC3.2□□□□□ -1.9
CCNFP41002 Y_RNA.23-201ENST00000362496 106 ntBASIC3.2□□□□□ -1.9
CCNFP41002 U8.7-201ENST00000364940 136 ntBASIC3.2□□□□□ -1.9
CCNFP41002 SNORD116-13-201ENST00000384408 92 ntBASIC3.2□□□□□ -1.9
CCNFP41002 MIR95-201ENST00000385072 81 ntBASIC3.2□□□□□ -1.9
CCNFP41002 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.2□□□□□ -1.9
CCNFP41002 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC3.2□□□□□ -1.9
CCNFP41002 HMGN2P18-201ENST00000450680 270 ntBASIC3.2□□□□□ -1.9
CCNFP41002 AC008155.2-201ENST00000464337 397 ntBASIC3.2□□□□□ -1.9
CCNFP41002 AC010598.1-201ENST00000510378 103 ntBASIC3.2□□□□□ -1.9
CCNFP41002 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.2□□□□□ -1.9
CCNFP41002 AL356280.1-201ENST00000603614 379 ntBASIC3.2□□□□□ -1.9
CCNFP41002 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC3.2□□□□□ -1.9
CCNFP41002 FAM35CP-201ENST00000554755 2470 ntBASIC3.2□□□□□ -1.9
CCNFP41002 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 148.1 ms