Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 RNU4-79P-201ENST00000362764 141 ntBASIC0.81□□□□□ -2.28
RFC3P40938 U3.8-201ENST00000363675 217 ntBASIC0.81□□□□□ -2.28
RFC3P40938 SNORD113-7-201ENST00000363762 77 ntBASIC0.81□□□□□ -2.28
RFC3P40938 SNORD115-32-201ENST00000364079 82 ntBASIC0.81□□□□□ -2.28
RFC3P40938 MIR660-201ENST00000385235 97 ntBASIC0.81□□□□□ -2.28
RFC3P40938 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC0.81□□□□□ -2.28
RFC3P40938 MTND3P16-201ENST00000452205 344 ntBASIC0.81□□□□□ -2.28
RFC3P40938 AC079354.2-201ENST00000453523 154 ntBASIC0.81□□□□□ -2.28
RFC3P40938 RNU7-94P-201ENST00000459576 63 ntBASIC0.81□□□□□ -2.28
RFC3P40938 BET1P1-201ENST00000482276 359 ntBASIC0.81□□□□□ -2.28
RFC3P40938 RN7SKP49-201ENST00000516675 260 ntBASIC0.81□□□□□ -2.28
RFC3P40938 RNU6-1223P-201ENST00000517124 104 ntBASIC0.81□□□□□ -2.28
RFC3P40938 AC026371.1-201ENST00000551867 419 ntBASIC0.81□□□□□ -2.28
RFC3P40938 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC0.81□□□□□ -2.28
RFC3P40938 GHRLOS.1-201ENST00000610995 70 ntBASIC0.81□□□□□ -2.28
RFC3P40938 AC022709.1-201ENST00000615967 87 ntBASIC0.81□□□□□ -2.28
RFC3P40938 RNU4-9P-201ENST00000364951 139 ntBASIC0.8□□□□□ -2.28
RFC3P40938 RNU6-128P-201ENST00000383976 107 ntBASIC0.8□□□□□ -2.28
RFC3P40938 Y_RNA.481-201ENST00000384373 102 ntBASIC0.8□□□□□ -2.28
RFC3P40938 RNU6-910P-201ENST00000390844 107 ntBASIC0.8□□□□□ -2.28
RFC3P40938 SNORD12-201ENST00000391002 90 ntBASIC0.8□□□□□ -2.28
RFC3P40938 CALM2P3-201ENST00000400429 449 ntBASIC0.8□□□□□ -2.28
RFC3P40938 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.8□□□□□ -2.28
RFC3P40938 RNU6-648P-201ENST00000410190 107 ntBASIC0.8□□□□□ -2.28
RFC3P40938 POLR2J4-204ENST00000418424 324 ntBASIC0.8□□□□□ -2.28
RFC3P40938 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC0.8□□□□□ -2.28
RFC3P40938 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC0.8□□□□□ -2.28
RFC3P40938 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC0.8□□□□□ -2.28
RFC3P40938 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC0.8□□□□□ -2.28
RFC3P40938 RNA5SP436-201ENST00000516020 115 ntBASIC0.8□□□□□ -2.28
RFC3P40938 RNU6-922P-201ENST00000516753 99 ntBASIC0.8□□□□□ -2.28
RFC3P40938 RNU6-835P-201ENST00000516974 104 ntBASIC0.8□□□□□ -2.28
RFC3P40938 RNU6-58P-201ENST00000517143 103 ntBASIC0.8□□□□□ -2.28
RFC3P40938 DEFB108E-201ENST00000524692 240 ntBASIC0.8□□□□□ -2.28
RFC3P40938 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC0.8□□□□□ -2.28
RFC3P40938 AK6P2-201ENST00000549020 471 ntBASIC0.8□□□□□ -2.28
RFC3P40938 AC136932.1-201ENST00000574771 208 ntBASIC0.8□□□□□ -2.28
RFC3P40938 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC0.8□□□□□ -2.28
RFC3P40938 AL021879.1-201ENST00000611756 288 ntBASIC0.8□□□□□ -2.28
RFC3P40938 MIR6515-201ENST00000619843 57 ntBASIC0.8□□□□□ -2.28
RFC3P40938 AC106754.2-201ENST00000623006 233 ntBASIC0.8□□□□□ -2.28
RFC3P40938 RNU6-1266P-201ENST00000362794 105 ntBASIC0.79□□□□□ -2.28
RFC3P40938 RNU6-137P-201ENST00000363680 108 ntBASIC0.79□□□□□ -2.28
RFC3P40938 RNY1-201ENST00000364228 113 ntBASIC0.79□□□□□ -2.28
RFC3P40938 RNU4-76P-201ENST00000364509 141 ntBASIC0.79□□□□□ -2.28
RFC3P40938 SNORD87-201ENST00000364849 89 ntBASIC0.79□□□□□ -2.28
RFC3P40938 Y_RNA.553-201ENST00000384670 102 ntBASIC0.79□□□□□ -2.28
RFC3P40938 MIR32-201ENST00000384965 70 ntBASIC0.79□□□□□ -2.28
RFC3P40938 MIR653-201ENST00000385279 96 ntBASIC0.79□□□□□ -2.28
RFC3P40938 AL590002.1-201ENST00000406554 418 ntBASIC0.79□□□□□ -2.28
RFC3P40938 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.79□□□□□ -2.28
RFC3P40938 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC0.79□□□□□ -2.28
RFC3P40938 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC0.79□□□□□ -2.28
RFC3P40938 AL353572.1-201ENST00000442490 417 ntBASIC0.79□□□□□ -2.28
RFC3P40938 AC048334.1-201ENST00000477975 159 ntBASIC0.79□□□□□ -2.28
RFC3P40938 AC105758.1-201ENST00000506038 399 ntBASIC0.79□□□□□ -2.28
RFC3P40938 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC0.79□□□□□ -2.28
RFC3P40938 SNORA25.14-201ENST00000516481 132 ntBASIC0.79□□□□□ -2.28
RFC3P40938 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC0.79□□□□□ -2.28
RFC3P40938 FRG2DP-202ENST00000566967 323 ntBASIC0.79□□□□□ -2.28
RFC3P40938 MIR6857-201ENST00000613267 93 ntBASIC0.79□□□□□ -2.28
RFC3P40938 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.79□□□□□ -2.28
RFC3P40938 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.79□□□□□ -2.28
RFC3P40938 RNU6-522P-201ENST00000364497 107 ntBASIC0.78□□□□□ -2.28
RFC3P40938 RNU1-36P-201ENST00000365130 165 ntBASIC0.78□□□□□ -2.28
RFC3P40938 MIR146A-201ENST00000385201 99 ntBASIC0.78□□□□□ -2.28
RFC3P40938 AC063976.4-201ENST00000421971 163 ntBASIC0.78□□□□□ -2.28
RFC3P40938 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC0.78□□□□□ -2.28
RFC3P40938 AC245047.7-201ENST00000440265 293 ntBASIC0.78□□□□□ -2.28
RFC3P40938 MTCO1P19-201ENST00000443487 500 ntBASIC0.78□□□□□ -2.28
RFC3P40938 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC0.78□□□□□ -2.28
RFC3P40938 RNU7-187P-201ENST00000458985 68 ntBASIC0.78□□□□□ -2.28
RFC3P40938 CYP3A137P-201ENST00000562436 69 ntBASIC0.78□□□□□ -2.28
RFC3P40938 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC0.78□□□□□ -2.28
RFC3P40938 AC008088.1-201ENST00000580993 280 ntBASIC0.78□□□□□ -2.28
RFC3P40938 AC006504.8-201ENST00000621046 635 ntBASIC0.78□□□□□ -2.28
RFC3P40938 AC097520.1-201ENST00000624435 385 ntBASIC0.78□□□□□ -2.28
RFC3P40938 RNU6-199P-201ENST00000362954 107 ntBASIC0.77□□□□□ -2.29
RFC3P40938 Y_RNA.319-201ENST00000365138 92 ntBASIC0.77□□□□□ -2.29
RFC3P40938 MIR153-2-201ENST00000385225 87 ntBASIC0.77□□□□□ -2.29
RFC3P40938 SNORD41-201ENST00000386967 70 ntBASIC0.77□□□□□ -2.29
RFC3P40938 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.77□□□□□ -2.29
RFC3P40938 Z82188.1-201ENST00000436709 154 ntBASIC0.77□□□□□ -2.29
RFC3P40938 SCARNA16.2-201ENST00000516520 172 ntBASIC0.77□□□□□ -2.29
RFC3P40938 AC027288.2-201ENST00000553028 243 ntBASIC0.77□□□□□ -2.29
RFC3P40938 FAM71BP1-201ENST00000604431 523 ntBASIC0.77□□□□□ -2.29
RFC3P40938 SNORA28-201ENST00000606769 126 ntBASIC0.77□□□□□ -2.29
RFC3P40938 MTND4P12-201ENST00000498999 1377 ntBASIC0.77□□□□□ -2.29
RFC3P40938 RNU6-254P-201ENST00000363377 107 ntBASIC0.76□□□□□ -2.29
RFC3P40938 RNU6-873P-201ENST00000363833 107 ntBASIC0.76□□□□□ -2.29
RFC3P40938 Y_RNA.231-201ENST00000364358 102 ntBASIC0.76□□□□□ -2.29
RFC3P40938 SNORD114-24-201ENST00000365029 72 ntBASIC0.76□□□□□ -2.29
RFC3P40938 Y_RNA.409-201ENST00000383990 98 ntBASIC0.76□□□□□ -2.29
RFC3P40938 SNORD116-8-201ENST00000384365 95 ntBASIC0.76□□□□□ -2.29
RFC3P40938 AC002429.1-201ENST00000437672 148 ntBASIC0.76□□□□□ -2.29
RFC3P40938 AC083904.1-201ENST00000487828 231 ntBASIC0.76□□□□□ -2.29
RFC3P40938 MTCO2P30-201ENST00000503662 364 ntBASIC0.76□□□□□ -2.29
RFC3P40938 SNORD79.1-201ENST00000516069 84 ntBASIC0.76□□□□□ -2.29
RFC3P40938 RNA5SP168-201ENST00000516642 112 ntBASIC0.76□□□□□ -2.29
RFC3P40938 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC0.76□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms