Protein–RNA interactions for Protein: P31431

SDC4, Syndecan-4, humanhuman

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDC4P31431 HSFY5P-201ENST00000453726 309 ntBASIC-0.31□□□□□ -2.46
SDC4P31431 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC-0.31□□□□□ -2.46
SDC4P31431 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC-0.31□□□□□ -2.46
SDC4P31431 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC-0.31□□□□□ -2.46
SDC4P31431 RNU7-28P-201ENST00000516759 62 ntBASIC-0.31□□□□□ -2.46
SDC4P31431 AC023157.2-201ENST00000540596 141 ntBASIC-0.31□□□□□ -2.46
SDC4P31431 AK6P2-201ENST00000549020 471 ntBASIC-0.31□□□□□ -2.46
SDC4P31431 AC139792.3-201ENST00000623525 224 ntBASIC-0.31□□□□□ -2.46
SDC4P31431 AC098679.4-201ENST00000624241 654 ntBASIC-0.31□□□□□ -2.46
SDC4P31431 RNU5B-2P-201ENST00000363036 113 ntBASIC-0.32□□□□□ -2.46
SDC4P31431 Y_RNA.115-201ENST00000363272 98 ntBASIC-0.32□□□□□ -2.46
SDC4P31431 RNU6-929P-201ENST00000384429 107 ntBASIC-0.32□□□□□ -2.46
SDC4P31431 MIR643-201ENST00000385267 97 ntBASIC-0.32□□□□□ -2.46
SDC4P31431 EIF4E2P1-201ENST00000393781 255 ntBASIC-0.32□□□□□ -2.46
SDC4P31431 ZNF885P-201ENST00000420174 1098 ntBASIC-0.32□□□□□ -2.46
SDC4P31431 PIGPP3-201ENST00000425307 415 ntBASIC-0.32□□□□□ -2.46
SDC4P31431 AC119618.1-201ENST00000434191 222 ntBASIC-0.32□□□□□ -2.46
SDC4P31431 Z98949.2-201ENST00000440996 144 ntBASIC-0.32□□□□□ -2.46
SDC4P31431 OFD1P4Y-201ENST00000455273 1179 ntBASIC-0.32□□□□□ -2.46
SDC4P31431 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC-0.32□□□□□ -2.46
SDC4P31431 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC-0.32□□□□□ -2.46
SDC4P31431 AC091021.1-201ENST00000468051 388 ntBASIC-0.32□□□□□ -2.46
SDC4P31431 SNORA25.17-201ENST00000517184 124 ntBASIC-0.32□□□□□ -2.46
SDC4P31431 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC-0.32□□□□□ -2.46
SDC4P31431 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC-0.32□□□□□ -2.46
SDC4P31431 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC-0.32□□□□□ -2.46
SDC4P31431 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC-0.32□□□□□ -2.46
SDC4P31431 MIR4438-201ENST00000585271 93 ntBASIC-0.32□□□□□ -2.46
SDC4P31431 BNIP3P40-201ENST00000596017 556 ntBASIC-0.32□□□□□ -2.46
SDC4P31431 AC112187.2-201ENST00000604345 283 ntBASIC-0.32□□□□□ -2.46
SDC4P31431 AC002044.1-201ENST00000606707 158 ntBASIC-0.32□□□□□ -2.46
SDC4P31431 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC-0.32□□□□□ -2.46
SDC4P31431 AC067863.3-201ENST00000624172 122 ntBASIC-0.32□□□□□ -2.46
SDC4P31431 UGP2-231ENST00000627474 264 ntTSL 5 BASIC-0.32□□□□□ -2.46
SDC4P31431 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC-0.33□□□□□ -2.46
SDC4P31431 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC-0.33□□□□□ -2.46
SDC4P31431 RNU6-756P-201ENST00000383997 107 ntBASIC-0.33□□□□□ -2.46
SDC4P31431 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC-0.33□□□□□ -2.46
SDC4P31431 MTCO2P23-201ENST00000425216 680 ntBASIC-0.33□□□□□ -2.46
SDC4P31431 RPL37P21-201ENST00000435890 276 ntBASIC-0.33□□□□□ -2.46
SDC4P31431 RPS3AP17-201ENST00000472594 777 ntBASIC-0.33□□□□□ -2.46
SDC4P31431 RNU2-56P-201ENST00000516826 190 ntBASIC-0.33□□□□□ -2.46
SDC4P31431 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC-0.33□□□□□ -2.46
SDC4P31431 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC-0.33□□□□□ -2.46
SDC4P31431 AC010999.1-201ENST00000611856 324 ntBASIC-0.33□□□□□ -2.46
SDC4P31431 MIR6779-201ENST00000617283 64 ntBASIC-0.33□□□□□ -2.46
SDC4P31431 AL109933.3-201ENST00000619095 188 ntBASIC-0.33□□□□□ -2.46
SDC4P31431 MIR6755-201ENST00000619993 66 ntBASIC-0.33□□□□□ -2.46
SDC4P31431 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.33□□□□□ -2.46
SDC4P31431 SNORD87-201ENST00000364849 89 ntBASIC-0.34□□□□□ -2.46
SDC4P31431 RNU6V-201ENST00000384105 107 ntBASIC-0.34□□□□□ -2.46
SDC4P31431 MIR516B2-201ENST00000385190 85 ntBASIC-0.34□□□□□ -2.46
SDC4P31431 MIR644A-201ENST00000385262 94 ntBASIC-0.34□□□□□ -2.46
SDC4P31431 ELOCP4-201ENST00000420090 333 ntBASIC-0.34□□□□□ -2.46
SDC4P31431 AL590632.1-201ENST00000424289 371 ntBASIC-0.34□□□□□ -2.46
SDC4P31431 MTCO2P29-201ENST00000465212 189 ntBASIC-0.34□□□□□ -2.46
SDC4P31431 AC116562.3-201ENST00000506136 177 ntBASIC-0.34□□□□□ -2.46
SDC4P31431 AC010493.1-201ENST00000513479 292 ntBASIC-0.34□□□□□ -2.46
SDC4P31431 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC-0.34□□□□□ -2.46
SDC4P31431 RNU6-977P-201ENST00000516411 103 ntBASIC-0.34□□□□□ -2.46
SDC4P31431 SCARNA24.1-201ENST00000516465 137 ntBASIC-0.34□□□□□ -2.46
SDC4P31431 RNU6ATAC22P-201ENST00000516794 89 ntBASIC-0.34□□□□□ -2.46
SDC4P31431 AC068587.5-201ENST00000528506 175 ntBASIC-0.34□□□□□ -2.46
SDC4P31431 MIR4764-201ENST00000580680 88 ntBASIC-0.34□□□□□ -2.46
SDC4P31431 MIR4305-201ENST00000583252 102 ntBASIC-0.34□□□□□ -2.46
SDC4P31431 RMST_3.1-201ENST00000611651 109 ntBASIC-0.34□□□□□ -2.46
SDC4P31431 AC104260.1-201ENST00000616660 539 ntBASIC-0.34□□□□□ -2.46
SDC4P31431 AC104010.1-201ENST00000616889 150 ntBASIC-0.34□□□□□ -2.46
SDC4P31431 AC011155.2-201ENST00000623202 216 ntBASIC-0.34□□□□□ -2.46
SDC4P31431 MIR1295B-201ENST00000636144 60 ntBASIC-0.34□□□□□ -2.46
SDC4P31431 RNU6-833P-201ENST00000363486 107 ntBASIC-0.35□□□□□ -2.47
SDC4P31431 RNA5SP325-201ENST00000363756 130 ntBASIC-0.35□□□□□ -2.47
SDC4P31431 U8.7-201ENST00000364940 136 ntBASIC-0.35□□□□□ -2.47
SDC4P31431 RNU6-302P-201ENST00000365249 107 ntBASIC-0.35□□□□□ -2.47
SDC4P31431 RNU6-127P-201ENST00000390897 107 ntBASIC-0.35□□□□□ -2.47
SDC4P31431 MIR891A-201ENST00000401237 79 ntBASIC-0.35□□□□□ -2.47
SDC4P31431 MIR1185-2-201ENST00000408687 86 ntBASIC-0.35□□□□□ -2.47
SDC4P31431 RNA5SP494-201ENST00000410653 129 ntBASIC-0.35□□□□□ -2.47
SDC4P31431 RNA5SP127-201ENST00000411051 133 ntBASIC-0.35□□□□□ -2.47
SDC4P31431 RPS26P42-201ENST00000413485 326 ntBASIC-0.35□□□□□ -2.47
SDC4P31431 AC098592.1-201ENST00000419352 333 ntBASIC-0.35□□□□□ -2.47
SDC4P31431 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC-0.35□□□□□ -2.47
SDC4P31431 MTND3P1-201ENST00000441336 220 ntBASIC-0.35□□□□□ -2.47
SDC4P31431 RPL23AP54-201ENST00000495129 419 ntBASIC-0.35□□□□□ -2.47
SDC4P31431 AC107401.1-201ENST00000503426 685 ntBASIC-0.35□□□□□ -2.47
SDC4P31431 RNU6-1291P-201ENST00000516591 104 ntBASIC-0.35□□□□□ -2.47
SDC4P31431 SNORA74.3-201ENST00000517108 154 ntBASIC-0.35□□□□□ -2.47
SDC4P31431 AC022616.3-201ENST00000523940 148 ntBASIC-0.35□□□□□ -2.47
SDC4P31431 MRPS36P4-201ENST00000534436 298 ntBASIC-0.35□□□□□ -2.47
SDC4P31431 AC093027.1-201ENST00000546698 429 ntBASIC-0.35□□□□□ -2.47
SDC4P31431 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC-0.35□□□□□ -2.47
SDC4P31431 AC091178.2-201ENST00000584401 117 ntBASIC-0.35□□□□□ -2.47
SDC4P31431 AL592221.1-201ENST00000605266 382 ntBASIC-0.35□□□□□ -2.47
SDC4P31431 AP000943.4-201ENST00000622912 357 ntBASIC-0.35□□□□□ -2.47
SDC4P31431 SCARNA4-201ENST00000629045 128 ntBASIC-0.35□□□□□ -2.47
SDC4P31431 VPS35-212ENST00000640313 141 ntTSL 5 BASIC-0.35□□□□□ -2.47
SDC4P31431 AC121333.1-201ENST00000567488 2709 ntBASIC-0.36□□□□□ -2.47
SDC4P31431 MIR548H2-201ENST00000408874 88 ntBASIC-0.36□□□□□ -2.47
SDC4P31431 RNU6-757P-201ENST00000410334 100 ntBASIC-0.36□□□□□ -2.47
SDC4P31431 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC-0.36□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 123.6 ms