Protein–RNA interactions for Protein: P31415

CASQ1, Calsequestrin-1, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ1P31415 RNU7-28P-201ENST00000516759 62 ntBASIC0.11□□□□□ -2.39
CASQ1P31415 RNU6-58P-201ENST00000517143 103 ntBASIC0.11□□□□□ -2.39
CASQ1P31415 AF235103.2-201ENST00000525753 346 ntBASIC0.11□□□□□ -2.39
CASQ1P31415 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC0.11□□□□□ -2.39
CASQ1P31415 AL137161.1-201ENST00000532231 390 ntBASIC0.11□□□□□ -2.39
CASQ1P31415 HIF1AP1-201ENST00000553642 175 ntBASIC0.11□□□□□ -2.39
CASQ1P31415 MIR98-201ENST00000606724 119 ntBASIC0.11□□□□□ -2.39
CASQ1P31415 AC006566.1-201ENST00000608943 513 ntBASIC0.11□□□□□ -2.39
CASQ1P31415 AL391834.2-201ENST00000609982 546 ntBASIC0.11□□□□□ -2.39
CASQ1P31415 RNU6-654P-201ENST00000364373 107 ntBASIC0.1□□□□□ -2.39
CASQ1P31415 Y_RNA.415-201ENST00000384012 112 ntBASIC0.1□□□□□ -2.39
CASQ1P31415 SNORD105-201ENST00000386910 85 ntBASIC0.1□□□□□ -2.39
CASQ1P31415 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.1□□□□□ -2.39
CASQ1P31415 RNU6-994P-201ENST00000410507 111 ntBASIC0.1□□□□□ -2.39
CASQ1P31415 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC0.1□□□□□ -2.39
CASQ1P31415 RNU7-138P-201ENST00000459479 64 ntBASIC0.1□□□□□ -2.39
CASQ1P31415 AC107401.1-201ENST00000503426 685 ntBASIC0.1□□□□□ -2.39
CASQ1P31415 AP001372.4-201ENST00000524889 472 ntBASIC0.1□□□□□ -2.39
CASQ1P31415 AC100812.1-201ENST00000607622 580 ntBASIC0.1□□□□□ -2.39
CASQ1P31415 SNORD11B-201ENST00000607707 90 ntBASIC0.1□□□□□ -2.39
CASQ1P31415 MIR6504-201ENST00000613520 61 ntBASIC0.1□□□□□ -2.39
CASQ1P31415 AC137590.2-201ENST00000619709 240 ntBASIC0.1□□□□□ -2.39
CASQ1P31415 AL390237.1-201ENST00000404226 1415 ntBASIC0.1□□□□□ -2.39
CASQ1P31415 MTND4P9-201ENST00000507819 1346 ntBASIC0.1□□□□□ -2.39
CASQ1P31415 MIR1276-201ENST00000408707 83 ntBASIC0.09□□□□□ -2.4
CASQ1P31415 MTCO2P8-201ENST00000412213 658 ntBASIC0.09□□□□□ -2.4
CASQ1P31415 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC0.09□□□□□ -2.4
CASQ1P31415 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC0.09□□□□□ -2.4
CASQ1P31415 NDUFB4P10-201ENST00000452541 359 ntBASIC0.09□□□□□ -2.4
CASQ1P31415 MTCO3P10-201ENST00000455912 772 ntBASIC0.09□□□□□ -2.4
CASQ1P31415 RNU7-180P-201ENST00000459240 63 ntBASIC0.09□□□□□ -2.4
CASQ1P31415 RNU6-1037P-201ENST00000459571 107 ntBASIC0.09□□□□□ -2.4
CASQ1P31415 GMFBP1-201ENST00000467831 427 ntBASIC0.09□□□□□ -2.4
CASQ1P31415 RPL23AP75-201ENST00000491601 451 ntBASIC0.09□□□□□ -2.4
CASQ1P31415 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC0.09□□□□□ -2.4
CASQ1P31415 AC097462.1-201ENST00000514125 324 ntBASIC0.09□□□□□ -2.4
CASQ1P31415 AC104576.1-201ENST00000524225 88 ntBASIC0.09□□□□□ -2.4
CASQ1P31415 ELOCP32-201ENST00000548625 324 ntBASIC0.09□□□□□ -2.4
CASQ1P31415 AL359757.2-201ENST00000624309 274 ntBASIC0.09□□□□□ -2.4
CASQ1P31415 MTND4P12-201ENST00000498999 1377 ntBASIC0.08□□□□□ -2.4
CASQ1P31415 SNORD44.1-201ENST00000363202 61 ntBASIC0.08□□□□□ -2.4
CASQ1P31415 RNU5F-7P-201ENST00000363696 115 ntBASIC0.08□□□□□ -2.4
CASQ1P31415 RNU2-9P-201ENST00000410194 145 ntBASIC0.08□□□□□ -2.4
CASQ1P31415 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC0.08□□□□□ -2.4
CASQ1P31415 AC105313.1-201ENST00000509121 353 ntBASIC0.08□□□□□ -2.4
CASQ1P31415 RNU6-1096P-201ENST00000517089 102 ntBASIC0.08□□□□□ -2.4
CASQ1P31415 AC087854.1-201ENST00000519706 414 ntBASIC0.08□□□□□ -2.4
CASQ1P31415 AC023442.1-201ENST00000531247 422 ntBASIC0.08□□□□□ -2.4
CASQ1P31415 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC0.08□□□□□ -2.4
CASQ1P31415 SCOCP1-201ENST00000554676 349 ntBASIC0.08□□□□□ -2.4
CASQ1P31415 MIR4452-201ENST00000583004 71 ntBASIC0.08□□□□□ -2.4
CASQ1P31415 TUSC7.1-201ENST00000610969 165 ntBASIC0.08□□□□□ -2.4
CASQ1P31415 HULC.1-201ENST00000612720 240 ntBASIC0.08□□□□□ -2.4
CASQ1P31415 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC0.08□□□□□ -2.4
CASQ1P31415 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.08□□□□□ -2.4
CASQ1P31415 RNU4-41P-201ENST00000364426 143 ntBASIC0.07□□□□□ -2.4
CASQ1P31415 RNA5SP95-201ENST00000410319 137 ntBASIC0.07□□□□□ -2.4
CASQ1P31415 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC0.07□□□□□ -2.4
CASQ1P31415 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC0.07□□□□□ -2.4
CASQ1P31415 NDUFA4P2-201ENST00000489989 244 ntBASIC0.07□□□□□ -2.4
CASQ1P31415 AC010469.2-201ENST00000496412 480 ntBASIC0.07□□□□□ -2.4
CASQ1P31415 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC0.07□□□□□ -2.4
CASQ1P31415 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC0.07□□□□□ -2.4
CASQ1P31415 RNU2-56P-201ENST00000516826 190 ntBASIC0.07□□□□□ -2.4
CASQ1P31415 AC104383.1-201ENST00000530297 370 ntBASIC0.07□□□□□ -2.4
CASQ1P31415 CLPTM1LP1-201ENST00000604519 484 ntBASIC0.07□□□□□ -2.4
CASQ1P31415 AL138726.1-201ENST00000614873 333 ntBASIC0.07□□□□□ -2.4
CASQ1P31415 FER-210ENST00000628534 558 ntTSL 5 BASIC0.07□□□□□ -2.4
CASQ1P31415 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC0.06□□□□□ -2.4
CASQ1P31415 RNU6-727P-201ENST00000363592 107 ntBASIC0.06□□□□□ -2.4
CASQ1P31415 Y_RNA.267-201ENST00000364679 109 ntBASIC0.06□□□□□ -2.4
CASQ1P31415 RNU4-45P-201ENST00000365469 141 ntBASIC0.06□□□□□ -2.4
CASQ1P31415 AL049545.1-201ENST00000401856 572 ntBASIC0.06□□□□□ -2.4
CASQ1P31415 SNORD111-201ENST00000408139 94 ntBASIC0.06□□□□□ -2.4
CASQ1P31415 RNU2-29P-201ENST00000410423 189 ntBASIC0.06□□□□□ -2.4
CASQ1P31415 RNA5SP247-201ENST00000411181 105 ntBASIC0.06□□□□□ -2.4
CASQ1P31415 MTCYBP8-201ENST00000422855 651 ntBASIC0.06□□□□□ -2.4
CASQ1P31415 Z82188.1-201ENST00000436709 154 ntBASIC0.06□□□□□ -2.4
CASQ1P31415 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC0.06□□□□□ -2.4
CASQ1P31415 AL392103.1-201ENST00000447000 198 ntBASIC0.06□□□□□ -2.4
CASQ1P31415 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC0.06□□□□□ -2.4
CASQ1P31415 AC005178.1-201ENST00000508392 440 ntBASIC0.06□□□□□ -2.4
CASQ1P31415 RNU6-863P-201ENST00000515989 104 ntBASIC0.06□□□□□ -2.4
CASQ1P31415 RNU6-1291P-201ENST00000516591 104 ntBASIC0.06□□□□□ -2.4
CASQ1P31415 RNU6-341P-201ENST00000516973 96 ntBASIC0.06□□□□□ -2.4
CASQ1P31415 MTND1P35-201ENST00000526739 508 ntBASIC0.06□□□□□ -2.4
CASQ1P31415 MIR4711-201ENST00000578274 70 ntBASIC0.06□□□□□ -2.4
CASQ1P31415 CPDP1-201ENST00000579660 283 ntBASIC0.06□□□□□ -2.4
CASQ1P31415 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC0.06□□□□□ -2.4
CASQ1P31415 RAC1P9-201ENST00000604990 392 ntBASIC0.06□□□□□ -2.4
CASQ1P31415 U2.17-201ENST00000611454 95 ntBASIC0.06□□□□□ -2.4
CASQ1P31415 AC004223.4-201ENST00000612426 332 ntBASIC0.06□□□□□ -2.4
CASQ1P31415 AL158209.2-201ENST00000619266 216 ntBASIC0.06□□□□□ -2.4
CASQ1P31415 SRP54-214ENST00000630962 162 ntTSL 5 BASIC0.06□□□□□ -2.4
CASQ1P31415 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC0.06□□□□□ -2.4
CASQ1P31415 RNU6-181P-201ENST00000363225 107 ntBASIC0.05□□□□□ -2.4
CASQ1P31415 SNORD115-8-201ENST00000363856 82 ntBASIC0.05□□□□□ -2.4
CASQ1P31415 SNORD115-38-201ENST00000365037 82 ntBASIC0.05□□□□□ -2.4
CASQ1P31415 RNU6-1329P-201ENST00000365664 107 ntBASIC0.05□□□□□ -2.4
CASQ1P31415 RNU6-784P-201ENST00000384330 106 ntBASIC0.05□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 306 ms