Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 HMGN2P10-201ENST00000448085 265 ntBASIC3.81□□□□□ -1.8
RXRBP28702 AC091179.1-201ENST00000461606 579 ntBASIC3.81□□□□□ -1.8
RXRBP28702 AC103975.1-201ENST00000482506 483 ntBASIC3.81□□□□□ -1.8
RXRBP28702 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC3.81□□□□□ -1.8
RXRBP28702 RNU6-487P-201ENST00000365430 104 ntBASIC3.8□□□□□ -1.8
RXRBP28702 RNU6-1264P-201ENST00000383891 107 ntBASIC3.8□□□□□ -1.8
RXRBP28702 Y_RNA.525-201ENST00000384570 113 ntBASIC3.8□□□□□ -1.8
RXRBP28702 SNORA1.3-201ENST00000384676 136 ntBASIC3.8□□□□□ -1.8
RXRBP28702 SNORA8.3-201ENST00000384679 139 ntBASIC3.8□□□□□ -1.8
RXRBP28702 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
RXRBP28702 RNU4-53P-201ENST00000410828 140 ntBASIC3.8□□□□□ -1.8
RXRBP28702 NDUFS5P4-201ENST00000412983 318 ntBASIC3.8□□□□□ -1.8
RXRBP28702 AC109329.2-201ENST00000519658 482 ntBASIC3.8□□□□□ -1.8
RXRBP28702 CYP4A27P-201ENST00000567218 190 ntBASIC3.8□□□□□ -1.8
RXRBP28702 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC3.8□□□□□ -1.8
RXRBP28702 AC006380.1-201ENST00000603598 186 ntBASIC3.8□□□□□ -1.8
RXRBP28702 TUG1_4.1-201ENST00000619464 181 ntBASIC3.8□□□□□ -1.8
RXRBP28702 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.8□□□□□ -1.8
RXRBP28702 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
RXRBP28702 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.8□□□□□ -1.8
RXRBP28702 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
RXRBP28702 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
RXRBP28702 Y_RNA.24-201ENST00000362508 103 ntBASIC3.79□□□□□ -1.8
RXRBP28702 RNU6-324P-201ENST00000363957 106 ntBASIC3.79□□□□□ -1.8
RXRBP28702 Y_RNA.337-201ENST00000365312 102 ntBASIC3.79□□□□□ -1.8
RXRBP28702 MIR616-201ENST00000385293 97 ntBASIC3.79□□□□□ -1.8
RXRBP28702 RNU6-460P-201ENST00000391158 108 ntBASIC3.79□□□□□ -1.8
RXRBP28702 AL031003.1-201ENST00000404229 172 ntBASIC3.79□□□□□ -1.8
RXRBP28702 AL355497.1-201ENST00000406262 551 ntBASIC3.79□□□□□ -1.8
RXRBP28702 RNA5SP504-201ENST00000410676 117 ntBASIC3.79□□□□□ -1.8
RXRBP28702 AL135786.1-201ENST00000415892 214 ntBASIC3.79□□□□□ -1.8
RXRBP28702 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.79□□□□□ -1.8
RXRBP28702 AC021739.1-201ENST00000559631 174 ntBASIC3.79□□□□□ -1.8
RXRBP28702 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
RXRBP28702 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
RXRBP28702 ZNF702P-202ENST00000434269 1966 ntBASIC3.79□□□□□ -1.8
RXRBP28702 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.79□□□□□ -1.8
RXRBP28702 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.79□□□□□ -1.8
RXRBP28702 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.79□□□□□ -1.8
RXRBP28702 Y_RNA.43-201ENST00000362670 111 ntBASIC3.78□□□□□ -1.8
RXRBP28702 RNU6-270P-201ENST00000364131 105 ntBASIC3.78□□□□□ -1.8
RXRBP28702 Y_RNA.287-201ENST00000364853 94 ntBASIC3.78□□□□□ -1.8
RXRBP28702 RNU6-1056P-201ENST00000383996 107 ntBASIC3.78□□□□□ -1.8
RXRBP28702 RN7SKP223-201ENST00000410582 62 ntBASIC3.78□□□□□ -1.8
RXRBP28702 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.78□□□□□ -1.8
RXRBP28702 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC3.78□□□□□ -1.8
RXRBP28702 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC3.78□□□□□ -1.8
RXRBP28702 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC3.78□□□□□ -1.8
RXRBP28702 RPL31P41-201ENST00000477967 372 ntBASIC3.78□□□□□ -1.8
RXRBP28702 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC3.78□□□□□ -1.8
RXRBP28702 AC096725.1-201ENST00000514266 313 ntBASIC3.78□□□□□ -1.8
RXRBP28702 RNU6-561P-201ENST00000516222 102 ntBASIC3.78□□□□□ -1.8
RXRBP28702 CYCSP26-201ENST00000534107 320 ntBASIC3.78□□□□□ -1.8
RXRBP28702 SNORD98-201ENST00000636377 67 ntBASIC3.78□□□□□ -1.8
RXRBP28702 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
RXRBP28702 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.78□□□□□ -1.8
RXRBP28702 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
RXRBP28702 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
RXRBP28702 RNA5SP289-201ENST00000362332 137 ntBASIC3.77□□□□□ -1.81
RXRBP28702 RNU6-199P-201ENST00000362954 107 ntBASIC3.77□□□□□ -1.81
RXRBP28702 Y_RNA.243-201ENST00000364481 109 ntBASIC3.77□□□□□ -1.81
RXRBP28702 Y_RNA.251-201ENST00000364551 99 ntBASIC3.77□□□□□ -1.81
RXRBP28702 RNU6-407P-201ENST00000365280 104 ntBASIC3.77□□□□□ -1.81
RXRBP28702 Y_RNA.361-201ENST00000365515 120 ntBASIC3.77□□□□□ -1.81
RXRBP28702 MT-TT-201ENST00000387460 66 ntBASIC3.77□□□□□ -1.81
RXRBP28702 BPY2DP-201ENST00000422208 265 ntBASIC3.77□□□□□ -1.81
RXRBP28702 AC009414.1-201ENST00000427200 443 ntBASIC3.77□□□□□ -1.81
RXRBP28702 RNU7-107P-201ENST00000459121 61 ntBASIC3.77□□□□□ -1.81
RXRBP28702 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC3.77□□□□□ -1.81
RXRBP28702 RNU5F-2P-201ENST00000516066 82 ntBASIC3.77□□□□□ -1.81
RXRBP28702 RNU6-1007P-201ENST00000516586 107 ntBASIC3.77□□□□□ -1.81
RXRBP28702 AC011602.1-201ENST00000546484 331 ntBASIC3.77□□□□□ -1.81
RXRBP28702 NACAP3-201ENST00000552100 481 ntBASIC3.77□□□□□ -1.81
RXRBP28702 AL138880.2-201ENST00000616214 239 ntBASIC3.77□□□□□ -1.81
RXRBP28702 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC3.77□□□□□ -1.81
RXRBP28702 AC007318.2-201ENST00000620999 243 ntBASIC3.77□□□□□ -1.81
RXRBP28702 AP001340.1-201ENST00000624405 217 ntBASIC3.77□□□□□ -1.81
RXRBP28702 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.77□□□□□ -1.81
RXRBP28702 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.76□□□□□ -1.81
RXRBP28702 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
RXRBP28702 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.76□□□□□ -1.81
RXRBP28702 SNORD87-201ENST00000364849 89 ntBASIC3.76□□□□□ -1.81
RXRBP28702 Y_RNA.293-201ENST00000364908 93 ntBASIC3.76□□□□□ -1.81
RXRBP28702 Y_RNA.310-201ENST00000365063 113 ntBASIC3.76□□□□□ -1.81
RXRBP28702 Y_RNA.368-201ENST00000365547 113 ntBASIC3.76□□□□□ -1.81
RXRBP28702 RNU6-969P-201ENST00000383900 105 ntBASIC3.76□□□□□ -1.81
RXRBP28702 MIR208B-201ENST00000401172 77 ntBASIC3.76□□□□□ -1.81
RXRBP28702 CBX3P9-201ENST00000402326 552 ntBASIC3.76□□□□□ -1.81
RXRBP28702 RNA5SP21-201ENST00000410917 96 ntBASIC3.76□□□□□ -1.81
RXRBP28702 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC3.76□□□□□ -1.81
RXRBP28702 AC006461.1-201ENST00000412637 326 ntBASIC3.76□□□□□ -1.81
RXRBP28702 YPEL5P1-201ENST00000419731 367 ntBASIC3.76□□□□□ -1.81
RXRBP28702 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC3.76□□□□□ -1.81
RXRBP28702 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.76□□□□□ -1.81
RXRBP28702 AC006539.3-201ENST00000454258 129 ntBASIC3.76□□□□□ -1.81
RXRBP28702 AC245047.8-201ENST00000456455 284 ntBASIC3.76□□□□□ -1.81
RXRBP28702 ACA59.2-201ENST00000517061 156 ntBASIC3.76□□□□□ -1.81
RXRBP28702 SNORA31.21-201ENST00000517180 77 ntBASIC3.76□□□□□ -1.81
RXRBP28702 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC3.76□□□□□ -1.81
RXRBP28702 AC127455.1-201ENST00000565496 145 ntBASIC3.76□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 109 ms