Protein–RNA interactions for Protein: P24928

POLR2A, DNA-directed RNA polymerase II subunit RPB1, humanhuman

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2AP24928 Y_RNA.240-201ENST00000364469 95 ntBASIC2.76□□□□□ -1.97
POLR2AP24928 RNU6-1117P-201ENST00000384525 104 ntBASIC2.76□□□□□ -1.97
POLR2AP24928 MIR487A-201ENST00000385009 80 ntBASIC2.76□□□□□ -1.97
POLR2AP24928 RNU2-61P-201ENST00000411069 191 ntBASIC2.76□□□□□ -1.97
POLR2AP24928 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC2.76□□□□□ -1.97
POLR2AP24928 RNU1-61P-201ENST00000516107 151 ntBASIC2.76□□□□□ -1.97
POLR2AP24928 RNU6-344P-201ENST00000516635 111 ntBASIC2.76□□□□□ -1.97
POLR2AP24928 ACA59.2-201ENST00000517061 156 ntBASIC2.76□□□□□ -1.97
POLR2AP24928 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC2.76□□□□□ -1.97
POLR2AP24928 AC005296.1-201ENST00000616145 209 ntBASIC2.76□□□□□ -1.97
POLR2AP24928 MIR219B-201ENST00000637023 88 ntBASIC2.76□□□□□ -1.97
POLR2AP24928 MIR3529-201ENST00000637713 78 ntBASIC2.76□□□□□ -1.97
POLR2AP24928 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.75□□□□□ -1.97
POLR2AP24928 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.75□□□□□ -1.97
POLR2AP24928 AC092881.1-201ENST00000638218 2733 ntBASIC2.75□□□□□ -1.97
POLR2AP24928 SNORD114-7-201ENST00000362520 77 ntBASIC2.75□□□□□ -1.97
POLR2AP24928 RNA5SP240-201ENST00000365355 128 ntBASIC2.75□□□□□ -1.97
POLR2AP24928 MIR613-201ENST00000385248 95 ntBASIC2.75□□□□□ -1.97
POLR2AP24928 AC138623.1-201ENST00000418060 216 ntBASIC2.75□□□□□ -1.97
POLR2AP24928 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.75□□□□□ -1.97
POLR2AP24928 RPS15AP11-201ENST00000594193 385 ntBASIC2.75□□□□□ -1.97
POLR2AP24928 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.75□□□□□ -1.97
POLR2AP24928 MIR6766-201ENST00000622641 72 ntBASIC2.75□□□□□ -1.97
POLR2AP24928 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC2.75□□□□□ -1.97
POLR2AP24928 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC2.75□□□□□ -1.97
POLR2AP24928 MTND5P35-201ENST00000557537 1720 ntBASIC2.75□□□□□ -1.97
POLR2AP24928 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC2.75□□□□□ -1.97
POLR2AP24928 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC2.75□□□□□ -1.97
POLR2AP24928 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC2.75□□□□□ -1.97
POLR2AP24928 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
POLR2AP24928 AC010680.1-201ENST00000590024 3590 ntBASIC2.74□□□□□ -1.97
POLR2AP24928 SNORA12-201ENST00000391162 147 ntBASIC2.74□□□□□ -1.97
POLR2AP24928 RNU6-966P-201ENST00000516479 104 ntBASIC2.74□□□□□ -1.97
POLR2AP24928 AL359198.2-201ENST00000611836 194 ntBASIC2.74□□□□□ -1.97
POLR2AP24928 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
POLR2AP24928 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
POLR2AP24928 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.74□□□□□ -1.97
POLR2AP24928 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
POLR2AP24928 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC2.74□□□□□ -1.97
POLR2AP24928 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
POLR2AP24928 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC2.74□□□□□ -1.97
POLR2AP24928 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC2.74□□□□□ -1.97
POLR2AP24928 Y_RNA.101-201ENST00000363154 102 ntBASIC2.74□□□□□ -1.97
POLR2AP24928 MIR181B1-201ENST00000385240 110 ntBASIC2.74□□□□□ -1.97
POLR2AP24928 MIR320B2-201ENST00000408479 138 ntBASIC2.74□□□□□ -1.97
POLR2AP24928 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC2.74□□□□□ -1.97
POLR2AP24928 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.74□□□□□ -1.97
POLR2AP24928 AC112771.1-201ENST00000463581 102 ntBASIC2.74□□□□□ -1.97
POLR2AP24928 SNRPGP7-201ENST00000469016 106 ntBASIC2.74□□□□□ -1.97
POLR2AP24928 RNU6-453P-201ENST00000516819 85 ntBASIC2.74□□□□□ -1.97
POLR2AP24928 RN7SKP282-201ENST00000516824 299 ntBASIC2.74□□□□□ -1.97
POLR2AP24928 MIR4308-201ENST00000580634 81 ntBASIC2.74□□□□□ -1.97
POLR2AP24928 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC2.74□□□□□ -1.97
POLR2AP24928 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.74□□□□□ -1.97
POLR2AP24928 AC012640.5-201ENST00000623897 319 ntBASIC2.74□□□□□ -1.97
POLR2AP24928 U6.98-201ENST00000637157 84 ntBASIC2.74□□□□□ -1.97
POLR2AP24928 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.74□□□□□ -1.97
POLR2AP24928 RBBP8P1-201ENST00000449447 1844 ntBASIC2.73□□□□□ -1.97
POLR2AP24928 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
POLR2AP24928 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
POLR2AP24928 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.73□□□□□ -1.97
POLR2AP24928 Y_RNA.233-201ENST00000364407 101 ntBASIC2.73□□□□□ -1.97
POLR2AP24928 Y_RNA.329-201ENST00000365209 107 ntBASIC2.73□□□□□ -1.97
POLR2AP24928 RNU6-728P-201ENST00000365375 104 ntBASIC2.73□□□□□ -1.97
POLR2AP24928 Y_RNA.571-201ENST00000384753 98 ntBASIC2.73□□□□□ -1.97
POLR2AP24928 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.73□□□□□ -1.97
POLR2AP24928 AIMP1P2-201ENST00000425294 312 ntBASIC2.73□□□□□ -1.97
POLR2AP24928 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.73□□□□□ -1.97
POLR2AP24928 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.73□□□□□ -1.97
POLR2AP24928 RNU6-62P-201ENST00000516526 102 ntBASIC2.73□□□□□ -1.97
POLR2AP24928 AC100767.1-201ENST00000528178 123 ntBASIC2.73□□□□□ -1.97
POLR2AP24928 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC2.73□□□□□ -1.97
POLR2AP24928 AC024405.2-202ENST00000532731 184 ntBASIC2.73□□□□□ -1.97
POLR2AP24928 AC010928.2-201ENST00000588017 287 ntBASIC2.73□□□□□ -1.97
POLR2AP24928 AL110115.1-201ENST00000614396 364 ntBASIC2.73□□□□□ -1.97
POLR2AP24928 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC2.73□□□□□ -1.97
POLR2AP24928 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC2.73□□□□□ -1.97
POLR2AP24928 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
POLR2AP24928 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.73□□□□□ -1.97
POLR2AP24928 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
POLR2AP24928 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC2.72□□□□□ -1.97
POLR2AP24928 RNU1-62P-201ENST00000362599 164 ntBASIC2.72□□□□□ -1.97
POLR2AP24928 RNA5SP167-201ENST00000365461 116 ntBASIC2.72□□□□□ -1.97
POLR2AP24928 RNU6-1310P-201ENST00000384153 107 ntBASIC2.72□□□□□ -1.97
POLR2AP24928 RPL30P14-201ENST00000482744 348 ntBASIC2.72□□□□□ -1.97
POLR2AP24928 RN7SL297P-201ENST00000483161 293 ntBASIC2.72□□□□□ -1.97
POLR2AP24928 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.72□□□□□ -1.97
POLR2AP24928 AL391903.3-201ENST00000612158 163 ntBASIC2.72□□□□□ -1.97
POLR2AP24928 AL021368.2-201ENST00000606125 5352 ntBASIC2.72□□□□□ -1.97
POLR2AP24928 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
POLR2AP24928 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC2.72□□□□□ -1.97
POLR2AP24928 SNORD115-30-201ENST00000364117 82 ntBASIC2.72□□□□□ -1.97
POLR2AP24928 RNU6-879P-201ENST00000364328 108 ntBASIC2.72□□□□□ -1.97
POLR2AP24928 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.72□□□□□ -1.97
POLR2AP24928 AC012306.1-201ENST00000423267 114 ntBASIC2.72□□□□□ -1.97
POLR2AP24928 RNU6-426P-201ENST00000516464 97 ntBASIC2.72□□□□□ -1.97
POLR2AP24928 RNA5SP309-201ENST00000516670 106 ntBASIC2.72□□□□□ -1.97
POLR2AP24928 RNU6-548P-201ENST00000517083 115 ntBASIC2.72□□□□□ -1.97
POLR2AP24928 RNU2-12P-201ENST00000517216 168 ntBASIC2.72□□□□□ -1.97
POLR2AP24928 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC2.72□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 156.3 ms