Protein–RNA interactions for Protein: P22415

USF1, Upstream stimulatory factor 1, humanhuman

Predicted RBP Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USF1P22415 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC0.86□□□□□ -2.27
USF1P22415 AL158211.1-201ENST00000566763 763 ntBASIC0.86□□□□□ -2.27
USF1P22415 AC022432.1-201ENST00000595739 310 ntBASIC0.86□□□□□ -2.27
USF1P22415 AC211469.2-201ENST00000605461 205 ntBASIC0.86□□□□□ -2.27
USF1P22415 AC103810.9-201ENST00000606688 112 ntBASIC0.86□□□□□ -2.27
USF1P22415 AL513423.1-201ENST00000621695 132 ntBASIC0.86□□□□□ -2.27
USF1P22415 RNU6-522P-201ENST00000364497 107 ntBASIC0.85□□□□□ -2.27
USF1P22415 RNU6-1042P-201ENST00000384204 107 ntBASIC0.85□□□□□ -2.27
USF1P22415 RNU6-790P-201ENST00000384479 105 ntBASIC0.85□□□□□ -2.27
USF1P22415 MIR32-201ENST00000384965 70 ntBASIC0.85□□□□□ -2.27
USF1P22415 AL034345.1-201ENST00000407768 123 ntBASIC0.85□□□□□ -2.27
USF1P22415 MIR1185-2-201ENST00000408687 86 ntBASIC0.85□□□□□ -2.27
USF1P22415 RNU6-1186P-201ENST00000410429 97 ntBASIC0.85□□□□□ -2.27
USF1P22415 AC005002.2-201ENST00000438228 269 ntBASIC0.85□□□□□ -2.27
USF1P22415 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC0.85□□□□□ -2.27
USF1P22415 AC079354.2-201ENST00000453523 154 ntBASIC0.85□□□□□ -2.27
USF1P22415 AC083904.1-201ENST00000487828 231 ntBASIC0.85□□□□□ -2.27
USF1P22415 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC0.85□□□□□ -2.27
USF1P22415 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC0.85□□□□□ -2.27
USF1P22415 SNORA25.14-201ENST00000516481 132 ntBASIC0.85□□□□□ -2.27
USF1P22415 RNU6-58P-201ENST00000517143 103 ntBASIC0.85□□□□□ -2.27
USF1P22415 RNA5SP454-201ENST00000517231 127 ntBASIC0.85□□□□□ -2.27
USF1P22415 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC0.85□□□□□ -2.27
USF1P22415 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC0.85□□□□□ -2.27
USF1P22415 AL162424.1-201ENST00000602325 221 ntBASIC0.85□□□□□ -2.27
USF1P22415 AL513534.2-201ENST00000603836 250 ntBASIC0.85□□□□□ -2.27
USF1P22415 SNORD114-21-201ENST00000606412 72 ntBASIC0.85□□□□□ -2.27
USF1P22415 RNU6-89P-201ENST00000606519 100 ntBASIC0.85□□□□□ -2.27
USF1P22415 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC0.85□□□□□ -2.27
USF1P22415 U6.73-201ENST00000619194 103 ntBASIC0.85□□□□□ -2.27
USF1P22415 AC006504.8-201ENST00000621046 635 ntBASIC0.85□□□□□ -2.27
USF1P22415 AL391516.1-201ENST00000554380 2449 ntBASIC0.84□□□□□ -2.27
USF1P22415 RNU6-1266P-201ENST00000362794 105 ntBASIC0.84□□□□□ -2.27
USF1P22415 RNU6-254P-201ENST00000363377 107 ntBASIC0.84□□□□□ -2.27
USF1P22415 RNU6-137P-201ENST00000363680 108 ntBASIC0.84□□□□□ -2.27
USF1P22415 MIR598-201ENST00000384868 97 ntBASIC0.84□□□□□ -2.27
USF1P22415 MIR153-2-201ENST00000385225 87 ntBASIC0.84□□□□□ -2.27
USF1P22415 DEFB108C-201ENST00000400154 252 ntBASIC0.84□□□□□ -2.27
USF1P22415 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC0.84□□□□□ -2.27
USF1P22415 RAB28P5-201ENST00000427490 651 ntBASIC0.84□□□□□ -2.27
USF1P22415 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC0.84□□□□□ -2.27
USF1P22415 ERLEC1P1-201ENST00000433806 578 ntBASIC0.84□□□□□ -2.27
USF1P22415 MTND4LP16-201ENST00000440828 295 ntBASIC0.84□□□□□ -2.27
USF1P22415 TPT1P7-201ENST00000458300 517 ntBASIC0.84□□□□□ -2.27
USF1P22415 RNU7-187P-201ENST00000458985 68 ntBASIC0.84□□□□□ -2.27
USF1P22415 RNU7-94P-201ENST00000459576 63 ntBASIC0.84□□□□□ -2.27
USF1P22415 Y_RNA.670-201ENST00000516255 105 ntBASIC0.84□□□□□ -2.27
USF1P22415 RNU7-99P-201ENST00000516271 62 ntBASIC0.84□□□□□ -2.27
USF1P22415 RNA5SP480-201ENST00000516840 109 ntBASIC0.84□□□□□ -2.27
USF1P22415 SNORA70.22-201ENST00000517160 124 ntBASIC0.84□□□□□ -2.27
USF1P22415 RNU7-128P-201ENST00000517247 62 ntBASIC0.84□□□□□ -2.27
USF1P22415 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC0.84□□□□□ -2.27
USF1P22415 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC0.84□□□□□ -2.27
USF1P22415 MIR6857-201ENST00000613267 93 ntBASIC0.84□□□□□ -2.27
USF1P22415 AC012676.2-201ENST00000619258 186 ntBASIC0.84□□□□□ -2.27
USF1P22415 MIR6863-201ENST00000636112 90 ntBASIC0.84□□□□□ -2.27
USF1P22415 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC0.83□□□□□ -2.28
USF1P22415 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC0.83□□□□□ -2.28
USF1P22415 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.83□□□□□ -2.28
USF1P22415 SNORD87-201ENST00000364849 89 ntBASIC0.83□□□□□ -2.28
USF1P22415 Y_RNA.319-201ENST00000365138 92 ntBASIC0.83□□□□□ -2.28
USF1P22415 RNU6-1119P-201ENST00000384349 108 ntBASIC0.83□□□□□ -2.28
USF1P22415 Y_RNA.540-201ENST00000384638 111 ntBASIC0.83□□□□□ -2.28
USF1P22415 MIR7-2-201ENST00000384970 110 ntBASIC0.83□□□□□ -2.28
USF1P22415 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC0.83□□□□□ -2.28
USF1P22415 HSPE1P13-201ENST00000451143 297 ntBASIC0.83□□□□□ -2.28
USF1P22415 PCMTD1P1-201ENST00000455560 355 ntBASIC0.83□□□□□ -2.28
USF1P22415 AC092991.1-201ENST00000477176 376 ntBASIC0.83□□□□□ -2.28
USF1P22415 MTCO2P30-201ENST00000503662 364 ntBASIC0.83□□□□□ -2.28
USF1P22415 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC0.83□□□□□ -2.28
USF1P22415 AC010486.3-201ENST00000511602 785 ntBASIC0.83□□□□□ -2.28
USF1P22415 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC0.83□□□□□ -2.28
USF1P22415 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC0.83□□□□□ -2.28
USF1P22415 B3GNTL1P2-201ENST00000603673 288 ntBASIC0.83□□□□□ -2.28
USF1P22415 AL021879.1-201ENST00000611756 288 ntBASIC0.83□□□□□ -2.28
USF1P22415 AC073349.3-201ENST00000617616 186 ntBASIC0.83□□□□□ -2.28
USF1P22415 AL158209.2-201ENST00000619266 216 ntBASIC0.83□□□□□ -2.28
USF1P22415 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.83□□□□□ -2.28
USF1P22415 SNORD3E-202ENST00000627253 216 ntBASIC0.83□□□□□ -2.28
USF1P22415 RNU5F-3P-201ENST00000363767 117 ntBASIC0.82□□□□□ -2.28
USF1P22415 RNU4-38P-201ENST00000364472 129 ntBASIC0.82□□□□□ -2.28
USF1P22415 RNU6-1187P-201ENST00000364771 110 ntBASIC0.82□□□□□ -2.28
USF1P22415 RNU6-505P-201ENST00000384427 107 ntBASIC0.82□□□□□ -2.28
USF1P22415 MIR532-201ENST00000385025 91 ntBASIC0.82□□□□□ -2.28
USF1P22415 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC0.82□□□□□ -2.28
USF1P22415 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC0.82□□□□□ -2.28
USF1P22415 Z82188.1-201ENST00000436709 154 ntBASIC0.82□□□□□ -2.28
USF1P22415 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC0.82□□□□□ -2.28
USF1P22415 RPL39P28-201ENST00000465655 155 ntBASIC0.82□□□□□ -2.28
USF1P22415 UBL5P1-201ENST00000507979 193 ntBASIC0.82□□□□□ -2.28
USF1P22415 SNORA31.4-201ENST00000516049 129 ntBASIC0.82□□□□□ -2.28
USF1P22415 MIR5695-201ENST00000579717 85 ntBASIC0.82□□□□□ -2.28
USF1P22415 POLR3GP2-201ENST00000588366 668 ntBASIC0.82□□□□□ -2.28
USF1P22415 RN7SKP299-201ENST00000606679 301 ntBASIC0.82□□□□□ -2.28
USF1P22415 AC068137.3-201ENST00000639191 341 ntBASIC0.82□□□□□ -2.28
USF1P22415 MTND5P26-201ENST00000426018 1752 ntBASIC0.82□□□□□ -2.28
USF1P22415 Y_RNA.151-201ENST00000363566 112 ntBASIC0.81□□□□□ -2.28
USF1P22415 RNU6-873P-201ENST00000363833 107 ntBASIC0.81□□□□□ -2.28
USF1P22415 RNU4-76P-201ENST00000364509 141 ntBASIC0.81□□□□□ -2.28
USF1P22415 MIR19B1-201ENST00000384829 87 ntBASIC0.81□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 169.5 ms