Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 SNRPGP19-201ENST00000603826 189 ntBASIC1.86□□□□□ -2.11
CDH3P22223 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.86□□□□□ -2.11
CDH3P22223 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.86□□□□□ -2.11
CDH3P22223 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
CDH3P22223 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
CDH3P22223 Y_RNA.132-201ENST00000363421 102 ntBASIC1.85□□□□□ -2.11
CDH3P22223 RNU5F-3P-201ENST00000363767 117 ntBASIC1.85□□□□□ -2.11
CDH3P22223 Y_RNA.252-201ENST00000364556 101 ntBASIC1.85□□□□□ -2.11
CDH3P22223 RNU4-42P-201ENST00000364738 142 ntBASIC1.85□□□□□ -2.11
CDH3P22223 Y_RNA.314-201ENST00000365114 102 ntBASIC1.85□□□□□ -2.11
CDH3P22223 SNORD42.2-201ENST00000365570 69 ntBASIC1.85□□□□□ -2.11
CDH3P22223 Y_RNA.394-201ENST00000383942 103 ntBASIC1.85□□□□□ -2.11
CDH3P22223 RNU6-1145P-201ENST00000384246 107 ntBASIC1.85□□□□□ -2.11
CDH3P22223 RNU6-318P-201ENST00000384283 103 ntBASIC1.85□□□□□ -2.11
CDH3P22223 AC099799.1-201ENST00000439809 192 ntBASIC1.85□□□□□ -2.11
CDH3P22223 AL357134.1-201ENST00000445848 426 ntBASIC1.85□□□□□ -2.11
CDH3P22223 RNU1-131P-201ENST00000458943 161 ntBASIC1.85□□□□□ -2.11
CDH3P22223 AC067942.3-201ENST00000512025 362 ntBASIC1.85□□□□□ -2.11
CDH3P22223 RNA5SP182-201ENST00000516064 82 ntBASIC1.85□□□□□ -2.11
CDH3P22223 Y_RNA.683-201ENST00000516508 93 ntBASIC1.85□□□□□ -2.11
CDH3P22223 RNU7-4P-201ENST00000516961 62 ntBASIC1.85□□□□□ -2.11
CDH3P22223 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.85□□□□□ -2.11
CDH3P22223 HSBP1P1-201ENST00000555205 166 ntBASIC1.85□□□□□ -2.11
CDH3P22223 AL080274.1-201ENST00000605565 220 ntBASIC1.85□□□□□ -2.11
CDH3P22223 AL357075.2-201ENST00000614906 189 ntBASIC1.85□□□□□ -2.11
CDH3P22223 AL078596.1-201ENST00000624856 447 ntBASIC1.85□□□□□ -2.11
CDH3P22223 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
CDH3P22223 MTND5P35-201ENST00000557537 1720 ntBASIC1.85□□□□□ -2.11
CDH3P22223 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.11
CDH3P22223 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
CDH3P22223 RNU6-1301P-201ENST00000362724 104 ntBASIC1.84□□□□□ -2.11
CDH3P22223 RNU6-23P-201ENST00000363283 107 ntBASIC1.84□□□□□ -2.11
CDH3P22223 Y_RNA.197-201ENST00000364004 102 ntBASIC1.84□□□□□ -2.11
CDH3P22223 RNU6-879P-201ENST00000364328 108 ntBASIC1.84□□□□□ -2.11
CDH3P22223 Y_RNA.431-201ENST00000384086 102 ntBASIC1.84□□□□□ -2.11
CDH3P22223 MIR548B-201ENST00000385247 97 ntBASIC1.84□□□□□ -2.11
CDH3P22223 U8.13-201ENST00000390842 128 ntBASIC1.84□□□□□ -2.11
CDH3P22223 RNA5SP465-201ENST00000391195 109 ntBASIC1.84□□□□□ -2.11
CDH3P22223 SNORA40.18-201ENST00000391200 128 ntBASIC1.84□□□□□ -2.11
CDH3P22223 RNU2-20P-201ENST00000410425 191 ntBASIC1.84□□□□□ -2.11
CDH3P22223 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC1.84□□□□□ -2.11
CDH3P22223 AC114482.1-201ENST00000418010 247 ntBASIC1.84□□□□□ -2.11
CDH3P22223 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC1.84□□□□□ -2.11
CDH3P22223 AL591806.2-201ENST00000433122 173 ntBASIC1.84□□□□□ -2.11
CDH3P22223 RNU7-169P-201ENST00000459456 61 ntBASIC1.84□□□□□ -2.11
CDH3P22223 RNU6-976P-201ENST00000516086 111 ntBASIC1.84□□□□□ -2.11
CDH3P22223 AP005660.1-201ENST00000522972 293 ntBASIC1.84□□□□□ -2.11
CDH3P22223 AC110588.1-201ENST00000559699 137 ntBASIC1.84□□□□□ -2.11
CDH3P22223 DEFB122-202ENST00000569013 197 ntBASIC1.84□□□□□ -2.11
CDH3P22223 MIR4524B-201ENST00000581569 115 ntBASIC1.84□□□□□ -2.11
CDH3P22223 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.84□□□□□ -2.11
CDH3P22223 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.84□□□□□ -2.11
CDH3P22223 CYP2C61P-201ENST00000604072 290 ntBASIC1.84□□□□□ -2.11
CDH3P22223 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC1.84□□□□□ -2.11
CDH3P22223 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.84□□□□□ -2.11
CDH3P22223 AL160413.1-201ENST00000622780 310 ntBASIC1.84□□□□□ -2.11
CDH3P22223 AC130454.1-201ENST00000622948 401 ntBASIC1.84□□□□□ -2.11
CDH3P22223 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.84□□□□□ -2.11
CDH3P22223 AC022513.1-201ENST00000624512 117 ntBASIC1.84□□□□□ -2.11
CDH3P22223 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.84□□□□□ -2.12
CDH3P22223 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.84□□□□□ -2.12
CDH3P22223 MTND4P29-201ENST00000503122 1372 ntBASIC1.84□□□□□ -2.12
CDH3P22223 MIR369-201ENST00000362155 70 ntBASIC1.83□□□□□ -2.12
CDH3P22223 Y_RNA.395-201ENST00000383945 109 ntBASIC1.83□□□□□ -2.12
CDH3P22223 Y_RNA.428-201ENST00000384078 102 ntBASIC1.83□□□□□ -2.12
CDH3P22223 RNU6-1235P-201ENST00000384559 107 ntBASIC1.83□□□□□ -2.12
CDH3P22223 RNU11-3P-201ENST00000391111 133 ntBASIC1.83□□□□□ -2.12
CDH3P22223 AC018865.2-201ENST00000423631 129 ntBASIC1.83□□□□□ -2.12
CDH3P22223 MTND4P28-201ENST00000426217 387 ntBASIC1.83□□□□□ -2.12
CDH3P22223 AC096644.2-201ENST00000429278 159 ntBASIC1.83□□□□□ -2.12
CDH3P22223 CEP57L1P1-201ENST00000430943 1201 ntBASIC1.83□□□□□ -2.12
CDH3P22223 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.83□□□□□ -2.12
CDH3P22223 UBE2V1P7-201ENST00000446395 340 ntBASIC1.83□□□□□ -2.12
CDH3P22223 Y_RNA.639-201ENST00000458981 102 ntBASIC1.83□□□□□ -2.12
CDH3P22223 RNU6-498P-201ENST00000459468 107 ntBASIC1.83□□□□□ -2.12
CDH3P22223 RNU7-57P-201ENST00000459540 60 ntBASIC1.83□□□□□ -2.12
CDH3P22223 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.83□□□□□ -2.12
CDH3P22223 RNU6-856P-201ENST00000516959 98 ntBASIC1.83□□□□□ -2.12
CDH3P22223 SNORD116.3-201ENST00000517176 78 ntBASIC1.83□□□□□ -2.12
CDH3P22223 AC144568.1-201ENST00000520139 137 ntBASIC1.83□□□□□ -2.12
CDH3P22223 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.83□□□□□ -2.12
CDH3P22223 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.83□□□□□ -2.12
CDH3P22223 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.83□□□□□ -2.12
CDH3P22223 MIR4713-201ENST00000582691 75 ntBASIC1.83□□□□□ -2.12
CDH3P22223 uc_338.22-201ENST00000622722 187 ntBASIC1.83□□□□□ -2.12
CDH3P22223 Y_RNA.460-201ENST00000384255 102 ntBASIC1.82□□□□□ -2.12
CDH3P22223 AL137792.2-201ENST00000443484 235 ntBASIC1.82□□□□□ -2.12
CDH3P22223 snoU13.23-201ENST00000458863 104 ntBASIC1.82□□□□□ -2.12
CDH3P22223 AC114982.1-201ENST00000469402 321 ntBASIC1.82□□□□□ -2.12
CDH3P22223 AC108210.2-201ENST00000503681 201 ntBASIC1.82□□□□□ -2.12
CDH3P22223 HMGN1P13-201ENST00000505795 138 ntBASIC1.82□□□□□ -2.12
CDH3P22223 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.82□□□□□ -2.12
CDH3P22223 RNU2-34P-201ENST00000516534 121 ntBASIC1.82□□□□□ -2.12
CDH3P22223 RN7SKP49-201ENST00000516675 260 ntBASIC1.82□□□□□ -2.12
CDH3P22223 RNU6-548P-201ENST00000517083 115 ntBASIC1.82□□□□□ -2.12
CDH3P22223 MIR2355-201ENST00000517199 87 ntBASIC1.82□□□□□ -2.12
CDH3P22223 CBX3P4-201ENST00000538909 354 ntBASIC1.82□□□□□ -2.12
CDH3P22223 MIR6845-201ENST00000613182 61 ntBASIC1.82□□□□□ -2.12
CDH3P22223 AC090574.1-201ENST00000623186 233 ntBASIC1.82□□□□□ -2.12
CDH3P22223 MIR4272-201ENST00000635924 64 ntBASIC1.82□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms