Protein–RNA interactions for Protein: P19876

CXCL3, C-X-C motif chemokine 3, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL3P19876 MTND4P7-201ENST00000523876 130 ntBASIC0.27□□□□□ -2.37
CXCL3P19876 MIR5000-201ENST00000577717 103 ntBASIC0.27□□□□□ -2.37
CXCL3P19876 MIR5583-1-201ENST00000580941 59 ntBASIC0.27□□□□□ -2.37
CXCL3P19876 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.27□□□□□ -2.37
CXCL3P19876 MIR151B-201ENST00000584249 96 ntBASIC0.27□□□□□ -2.37
CXCL3P19876 MIR8076-201ENST00000611401 83 ntBASIC0.27□□□□□ -2.37
CXCL3P19876 HULC.1-201ENST00000612720 240 ntBASIC0.27□□□□□ -2.37
CXCL3P19876 AC122133.1-201ENST00000613964 233 ntBASIC0.27□□□□□ -2.37
CXCL3P19876 AC005609.4-201ENST00000625071 447 ntBASIC0.27□□□□□ -2.37
CXCL3P19876 AC134026.1-201ENST00000623249 2239 ntBASIC0.27□□□□□ -2.37
CXCL3P19876 RNU5A-2P-201ENST00000384337 116 ntBASIC0.26□□□□□ -2.37
CXCL3P19876 RNU6-248P-201ENST00000410720 107 ntBASIC0.26□□□□□ -2.37
CXCL3P19876 MTCO3P19-201ENST00000415864 321 ntBASIC0.26□□□□□ -2.37
CXCL3P19876 AL162725.1-201ENST00000435405 301 ntBASIC0.26□□□□□ -2.37
CXCL3P19876 AC104332.1-201ENST00000440471 797 ntBASIC0.26□□□□□ -2.37
CXCL3P19876 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC0.26□□□□□ -2.37
CXCL3P19876 RNU6-341P-201ENST00000516973 96 ntBASIC0.26□□□□□ -2.37
CXCL3P19876 AC109810.1-201ENST00000534066 224 ntBASIC0.26□□□□□ -2.37
CXCL3P19876 MDM2-233ENST00000545204 398 ntTSL 5 BASIC0.26□□□□□ -2.37
CXCL3P19876 CPDP1-201ENST00000579660 283 ntBASIC0.26□□□□□ -2.37
CXCL3P19876 AC010620.1-201ENST00000601088 1102 ntBASIC0.26□□□□□ -2.37
CXCL3P19876 AC087683.2-201ENST00000611384 326 ntBASIC0.26□□□□□ -2.37
CXCL3P19876 AC093913.1-201ENST00000614178 329 ntBASIC0.26□□□□□ -2.37
CXCL3P19876 uc_338.34-201ENST00000617467 174 ntBASIC0.26□□□□□ -2.37
CXCL3P19876 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC0.26□□□□□ -2.37
CXCL3P19876 MIR6516-201ENST00000630554 81 ntBASIC0.26□□□□□ -2.37
CXCL3P19876 AC068137.4-201ENST00000638485 296 ntBASIC0.26□□□□□ -2.37
CXCL3P19876 AL442644.1-201ENST00000454390 3105 ntBASIC0.26□□□□□ -2.37
CXCL3P19876 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.26□□□□□ -2.37
CXCL3P19876 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.25□□□□□ -2.37
CXCL3P19876 AC090625.1-201ENST00000357130 210 ntBASIC0.25□□□□□ -2.37
CXCL3P19876 MIRLET7C-201ENST00000362160 84 ntBASIC0.25□□□□□ -2.37
CXCL3P19876 RNU6-137P-201ENST00000363680 108 ntBASIC0.25□□□□□ -2.37
CXCL3P19876 RNU6-82P-201ENST00000363970 107 ntBASIC0.25□□□□□ -2.37
CXCL3P19876 SNORA25.9-201ENST00000365087 128 ntBASIC0.25□□□□□ -2.37
CXCL3P19876 RNU6-793P-201ENST00000384233 104 ntBASIC0.25□□□□□ -2.37
CXCL3P19876 RNU6-297P-201ENST00000384636 107 ntBASIC0.25□□□□□ -2.37
CXCL3P19876 RNA5SP219-201ENST00000390940 113 ntBASIC0.25□□□□□ -2.37
CXCL3P19876 MIR450B-201ENST00000401182 78 ntBASIC0.25□□□□□ -2.37
CXCL3P19876 RNU2-9P-201ENST00000410194 145 ntBASIC0.25□□□□□ -2.37
CXCL3P19876 AL663109.1-201ENST00000411498 844 ntBASIC0.25□□□□□ -2.37
CXCL3P19876 AC244098.3-201ENST00000424803 96 ntBASIC0.25□□□□□ -2.37
CXCL3P19876 AP000870.1-201ENST00000472927 406 ntBASIC0.25□□□□□ -2.37
CXCL3P19876 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC0.25□□□□□ -2.37
CXCL3P19876 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC0.25□□□□□ -2.37
CXCL3P19876 RNU6-1129P-201ENST00000515964 104 ntBASIC0.25□□□□□ -2.37
CXCL3P19876 RNA5SP134-201ENST00000516492 96 ntBASIC0.25□□□□□ -2.37
CXCL3P19876 RNU2-56P-201ENST00000516826 190 ntBASIC0.25□□□□□ -2.37
CXCL3P19876 SCARNA1-201ENST00000517138 166 ntBASIC0.25□□□□□ -2.37
CXCL3P19876 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC0.25□□□□□ -2.37
CXCL3P19876 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC0.25□□□□□ -2.37
CXCL3P19876 AK6P2-201ENST00000549020 471 ntBASIC0.25□□□□□ -2.37
CXCL3P19876 MIR3192-201ENST00000584920 77 ntBASIC0.25□□□□□ -2.37
CXCL3P19876 AL117336.2-201ENST00000602435 335 ntBASIC0.25□□□□□ -2.37
CXCL3P19876 AC016597.2-201ENST00000613256 341 ntBASIC0.25□□□□□ -2.37
CXCL3P19876 AC007014.2-201ENST00000615581 479 ntBASIC0.25□□□□□ -2.37
CXCL3P19876 MIR5087-201ENST00000635826 76 ntBASIC0.25□□□□□ -2.37
CXCL3P19876 Y_RNA.4-201ENST00000362333 112 ntBASIC0.24□□□□□ -2.37
CXCL3P19876 Y_RNA.100-201ENST00000363141 102 ntBASIC0.24□□□□□ -2.37
CXCL3P19876 CYCSP46-201ENST00000423569 204 ntBASIC0.24□□□□□ -2.37
CXCL3P19876 SNORD65B-201ENST00000459126 73 ntBASIC0.24□□□□□ -2.37
CXCL3P19876 RNU6-58P-201ENST00000517143 103 ntBASIC0.24□□□□□ -2.37
CXCL3P19876 AP001372.4-201ENST00000524889 472 ntBASIC0.24□□□□□ -2.37
CXCL3P19876 AP002004.2-201ENST00000531656 154 ntBASIC0.24□□□□□ -2.37
CXCL3P19876 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC0.24□□□□□ -2.37
CXCL3P19876 MIR4424-201ENST00000585257 86 ntBASIC0.24□□□□□ -2.37
CXCL3P19876 7SK.7-201ENST00000603504 247 ntBASIC0.24□□□□□ -2.37
CXCL3P19876 AC017083.3-201ENST00000609955 700 ntBASIC0.24□□□□□ -2.37
CXCL3P19876 AC103705.1-201ENST00000619013 241 ntBASIC0.24□□□□□ -2.37
CXCL3P19876 7SK.10-201ENST00000621414 298 ntBASIC0.24□□□□□ -2.37
CXCL3P19876 AC243829.3-201ENST00000622177 108 ntBASIC0.24□□□□□ -2.37
CXCL3P19876 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.24□□□□□ -2.37
CXCL3P19876 RNU6-833P-201ENST00000363486 107 ntBASIC0.23□□□□□ -2.37
CXCL3P19876 SNORD115-32-201ENST00000364079 82 ntBASIC0.23□□□□□ -2.37
CXCL3P19876 BX295541.1-201ENST00000417774 250 ntBASIC0.23□□□□□ -2.37
CXCL3P19876 MTATP6P18-201ENST00000417994 673 ntBASIC0.23□□□□□ -2.37
CXCL3P19876 AC067940.1-201ENST00000458411 300 ntBASIC0.23□□□□□ -2.37
CXCL3P19876 AC002350.1-201ENST00000490759 375 ntBASIC0.23□□□□□ -2.37
CXCL3P19876 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC0.23□□□□□ -2.37
CXCL3P19876 CCDC34P1-201ENST00000507441 517 ntBASIC0.23□□□□□ -2.37
CXCL3P19876 AC010598.1-201ENST00000510378 103 ntBASIC0.23□□□□□ -2.37
CXCL3P19876 AC097462.1-201ENST00000514125 324 ntBASIC0.23□□□□□ -2.37
CXCL3P19876 RNU6-189P-201ENST00000516120 101 ntBASIC0.23□□□□□ -2.37
CXCL3P19876 RNU4ATAC8P-201ENST00000516196 109 ntBASIC0.23□□□□□ -2.37
CXCL3P19876 RPL21P9-201ENST00000556149 474 ntBASIC0.23□□□□□ -2.37
CXCL3P19876 AC091178.2-201ENST00000584401 117 ntBASIC0.23□□□□□ -2.37
CXCL3P19876 AC008536.2-201ENST00000607284 349 ntBASIC0.23□□□□□ -2.37
CXCL3P19876 AL390237.1-201ENST00000404226 1415 ntBASIC0.22□□□□□ -2.37
CXCL3P19876 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.22□□□□□ -2.37
CXCL3P19876 MIR103A2-201ENST00000362154 78 ntBASIC0.22□□□□□ -2.37
CXCL3P19876 RNU5F-3P-201ENST00000363767 117 ntBASIC0.22□□□□□ -2.37
CXCL3P19876 SNORD87-201ENST00000364849 89 ntBASIC0.22□□□□□ -2.37
CXCL3P19876 Y_RNA.330-201ENST00000365230 109 ntBASIC0.22□□□□□ -2.37
CXCL3P19876 Y_RNA.336-201ENST00000365307 109 ntBASIC0.22□□□□□ -2.37
CXCL3P19876 Y_RNA.560-201ENST00000384689 102 ntBASIC0.22□□□□□ -2.37
CXCL3P19876 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.22□□□□□ -2.37
CXCL3P19876 MTCO2P12-201ENST00000427426 682 ntBASIC0.22□□□□□ -2.37
CXCL3P19876 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC0.22□□□□□ -2.37
CXCL3P19876 AL157687.1-201ENST00000554853 619 ntBASIC0.22□□□□□ -2.37
CXCL3P19876 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.22□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 140.5 ms