Protein–RNA interactions for Protein: P16410

CTLA4, Cytotoxic T-lymphocyte protein 4, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTLA4P16410 SNORA31.2-201ENST00000516019 134 ntBASIC0.64□□□□□ -2.31
CTLA4P16410 RNA5SP454-201ENST00000517231 127 ntBASIC0.64□□□□□ -2.31
CTLA4P16410 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC0.64□□□□□ -2.31
CTLA4P16410 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC0.64□□□□□ -2.31
CTLA4P16410 AC119751.7-201ENST00000600494 245 ntBASIC0.64□□□□□ -2.31
CTLA4P16410 AC063944.3-201ENST00000609969 533 ntBASIC0.64□□□□□ -2.31
CTLA4P16410 GHRLOS.1-201ENST00000610995 70 ntBASIC0.64□□□□□ -2.31
CTLA4P16410 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC0.64□□□□□ -2.31
CTLA4P16410 RNU6-1266P-201ENST00000362794 105 ntBASIC0.63□□□□□ -2.31
CTLA4P16410 RNU6-522P-201ENST00000364497 107 ntBASIC0.63□□□□□ -2.31
CTLA4P16410 RNU4-76P-201ENST00000364509 141 ntBASIC0.63□□□□□ -2.31
CTLA4P16410 MIR32-201ENST00000384965 70 ntBASIC0.63□□□□□ -2.31
CTLA4P16410 RNU6-910P-201ENST00000390844 107 ntBASIC0.63□□□□□ -2.31
CTLA4P16410 AL590002.1-201ENST00000406554 418 ntBASIC0.63□□□□□ -2.31
CTLA4P16410 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.63□□□□□ -2.31
CTLA4P16410 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC0.63□□□□□ -2.31
CTLA4P16410 AC004941.2-201ENST00000427009 228 ntBASIC0.63□□□□□ -2.31
CTLA4P16410 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC0.63□□□□□ -2.31
CTLA4P16410 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC0.63□□□□□ -2.31
CTLA4P16410 SNORA25.14-201ENST00000516481 132 ntBASIC0.63□□□□□ -2.31
CTLA4P16410 RN7SKP49-201ENST00000516675 260 ntBASIC0.63□□□□□ -2.31
CTLA4P16410 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC0.63□□□□□ -2.31
CTLA4P16410 AC007834.2-201ENST00000536310 343 ntBASIC0.63□□□□□ -2.31
CTLA4P16410 AK6P2-201ENST00000549020 471 ntBASIC0.63□□□□□ -2.31
CTLA4P16410 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC0.63□□□□□ -2.31
CTLA4P16410 FRG2DP-202ENST00000566967 323 ntBASIC0.63□□□□□ -2.31
CTLA4P16410 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC0.63□□□□□ -2.31
CTLA4P16410 AC106800.4-201ENST00000614905 153 ntBASIC0.63□□□□□ -2.31
CTLA4P16410 AC006504.8-201ENST00000621046 635 ntBASIC0.63□□□□□ -2.31
CTLA4P16410 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.62□□□□□ -2.31
CTLA4P16410 HSBP1P2-201ENST00000299671 229 ntBASIC0.62□□□□□ -2.31
CTLA4P16410 Y_RNA.77-201ENST00000362962 107 ntBASIC0.62□□□□□ -2.31
CTLA4P16410 RNU6-254P-201ENST00000363377 107 ntBASIC0.62□□□□□ -2.31
CTLA4P16410 Y_RNA.231-201ENST00000364358 102 ntBASIC0.62□□□□□ -2.31
CTLA4P16410 SNORD87-201ENST00000364849 89 ntBASIC0.62□□□□□ -2.31
CTLA4P16410 Y_RNA.319-201ENST00000365138 92 ntBASIC0.62□□□□□ -2.31
CTLA4P16410 Y_RNA.409-201ENST00000383990 98 ntBASIC0.62□□□□□ -2.31
CTLA4P16410 MIR153-2-201ENST00000385225 87 ntBASIC0.62□□□□□ -2.31
CTLA4P16410 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC0.62□□□□□ -2.31
CTLA4P16410 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC0.62□□□□□ -2.31
CTLA4P16410 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC0.62□□□□□ -2.31
CTLA4P16410 AC245047.7-201ENST00000440265 293 ntBASIC0.62□□□□□ -2.31
CTLA4P16410 RNU7-187P-201ENST00000458985 68 ntBASIC0.62□□□□□ -2.31
CTLA4P16410 AC048334.1-201ENST00000477975 159 ntBASIC0.62□□□□□ -2.31
CTLA4P16410 AC117454.1-201ENST00000491120 168 ntBASIC0.62□□□□□ -2.31
CTLA4P16410 MTCO2P30-201ENST00000503662 364 ntBASIC0.62□□□□□ -2.31
CTLA4P16410 AC105758.1-201ENST00000506038 399 ntBASIC0.62□□□□□ -2.31
CTLA4P16410 PSMC1P5-201ENST00000512850 177 ntBASIC0.62□□□□□ -2.31
CTLA4P16410 RNU6-922P-201ENST00000516753 99 ntBASIC0.62□□□□□ -2.31
CTLA4P16410 AC011604.1-201ENST00000545978 196 ntBASIC0.62□□□□□ -2.31
CTLA4P16410 AL158211.1-201ENST00000566763 763 ntBASIC0.62□□□□□ -2.31
CTLA4P16410 AC136443.5-201ENST00000603741 370 ntBASIC0.62□□□□□ -2.31
CTLA4P16410 RNU6-89P-201ENST00000606519 100 ntBASIC0.62□□□□□ -2.31
CTLA4P16410 AL158209.2-201ENST00000619266 216 ntBASIC0.62□□□□□ -2.31
CTLA4P16410 AC078883.4-201ENST00000623218 367 ntBASIC0.62□□□□□ -2.31
CTLA4P16410 AC097520.1-201ENST00000624435 385 ntBASIC0.62□□□□□ -2.31
CTLA4P16410 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC0.61□□□□□ -2.31
CTLA4P16410 MTND4P12-201ENST00000498999 1377 ntBASIC0.61□□□□□ -2.31
CTLA4P16410 RNU6-873P-201ENST00000363833 107 ntBASIC0.61□□□□□ -2.31
CTLA4P16410 SNORD114-24-201ENST00000365029 72 ntBASIC0.61□□□□□ -2.31
CTLA4P16410 RNU6-790P-201ENST00000384479 105 ntBASIC0.61□□□□□ -2.31
CTLA4P16410 MIR1276-201ENST00000408707 83 ntBASIC0.61□□□□□ -2.31
CTLA4P16410 AC114482.1-201ENST00000418010 247 ntBASIC0.61□□□□□ -2.31
CTLA4P16410 AC063976.4-201ENST00000421971 163 ntBASIC0.61□□□□□ -2.31
CTLA4P16410 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC0.61□□□□□ -2.31
CTLA4P16410 MTND5P15-201ENST00000434246 349 ntBASIC0.61□□□□□ -2.31
CTLA4P16410 NDUFA5P4-201ENST00000436704 385 ntBASIC0.61□□□□□ -2.31
CTLA4P16410 Z82188.1-201ENST00000436709 154 ntBASIC0.61□□□□□ -2.31
CTLA4P16410 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC0.61□□□□□ -2.31
CTLA4P16410 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC0.61□□□□□ -2.31
CTLA4P16410 AC083904.1-201ENST00000487828 231 ntBASIC0.61□□□□□ -2.31
CTLA4P16410 AC010424.1-201ENST00000506336 297 ntBASIC0.61□□□□□ -2.31
CTLA4P16410 SNORD79.1-201ENST00000516069 84 ntBASIC0.61□□□□□ -2.31
CTLA4P16410 DEFB108E-201ENST00000524692 240 ntBASIC0.61□□□□□ -2.31
CTLA4P16410 OSBPL9P5-201ENST00000542581 171 ntBASIC0.61□□□□□ -2.31
CTLA4P16410 AC090049.2-201ENST00000550377 109 ntBASIC0.61□□□□□ -2.31
CTLA4P16410 AC027288.2-201ENST00000553028 243 ntBASIC0.61□□□□□ -2.31
CTLA4P16410 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC0.61□□□□□ -2.31
CTLA4P16410 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC0.61□□□□□ -2.31
CTLA4P16410 SNORA28-201ENST00000606769 126 ntBASIC0.61□□□□□ -2.31
CTLA4P16410 MIR6835-201ENST00000621552 64 ntBASIC0.61□□□□□ -2.31
CTLA4P16410 AC106754.2-201ENST00000623006 233 ntBASIC0.61□□□□□ -2.31
CTLA4P16410 AC006435.5-201ENST00000624486 112 ntBASIC0.61□□□□□ -2.31
CTLA4P16410 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.61□□□□□ -2.31
CTLA4P16410 ELL2P3-201ENST00000457883 1602 ntBASIC0.6□□□□□ -2.31
CTLA4P16410 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.6□□□□□ -2.31
CTLA4P16410 RNU6-199P-201ENST00000362954 107 ntBASIC0.6□□□□□ -2.31
CTLA4P16410 RNU6-1085P-201ENST00000363576 107 ntBASIC0.6□□□□□ -2.31
CTLA4P16410 RNU5F-3P-201ENST00000363767 117 ntBASIC0.6□□□□□ -2.31
CTLA4P16410 RNU6-280P-201ENST00000364145 104 ntBASIC0.6□□□□□ -2.31
CTLA4P16410 Y_RNA.359-201ENST00000365498 102 ntBASIC0.6□□□□□ -2.31
CTLA4P16410 Y_RNA.415-201ENST00000384012 112 ntBASIC0.6□□□□□ -2.31
CTLA4P16410 RNU6-159P-201ENST00000391080 106 ntBASIC0.6□□□□□ -2.31
CTLA4P16410 DEFB108C-201ENST00000400154 252 ntBASIC0.6□□□□□ -2.31
CTLA4P16410 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.6□□□□□ -2.31
CTLA4P16410 ERLEC1P1-201ENST00000433806 578 ntBASIC0.6□□□□□ -2.31
CTLA4P16410 AC002429.1-201ENST00000437672 148 ntBASIC0.6□□□□□ -2.31
CTLA4P16410 PCMTD1P1-201ENST00000455560 355 ntBASIC0.6□□□□□ -2.31
CTLA4P16410 TPT1P7-201ENST00000458300 517 ntBASIC0.6□□□□□ -2.31
CTLA4P16410 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC0.6□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 227.7 ms