Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 Y_RNA.415-201ENST00000384012 112 ntBASIC1.67□□□□□ -2.14
PDGFRAP16234 RNU6-601P-201ENST00000384540 107 ntBASIC1.67□□□□□ -2.14
PDGFRAP16234 FTH1P12-201ENST00000432137 551 ntBASIC1.67□□□□□ -2.14
PDGFRAP16234 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC1.67□□□□□ -2.14
PDGFRAP16234 RNU1-98P-201ENST00000458992 160 ntBASIC1.67□□□□□ -2.14
PDGFRAP16234 Y_RNA.638-201ENST00000459374 113 ntBASIC1.67□□□□□ -2.14
PDGFRAP16234 RPL31P58-201ENST00000469001 379 ntBASIC1.67□□□□□ -2.14
PDGFRAP16234 RNU6-1114P-201ENST00000516022 107 ntBASIC1.67□□□□□ -2.14
PDGFRAP16234 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC1.67□□□□□ -2.14
PDGFRAP16234 AC016925.2-201ENST00000605108 242 ntBASIC1.67□□□□□ -2.14
PDGFRAP16234 AC005014.2-201ENST00000607795 599 ntBASIC1.67□□□□□ -2.14
PDGFRAP16234 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.67□□□□□ -2.14
PDGFRAP16234 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.67□□□□□ -2.14
PDGFRAP16234 AC010999.1-201ENST00000611856 324 ntBASIC1.67□□□□□ -2.14
PDGFRAP16234 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC1.67□□□□□ -2.14
PDGFRAP16234 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
PDGFRAP16234 Y_RNA.88-201ENST00000363029 99 ntBASIC1.66□□□□□ -2.14
PDGFRAP16234 RNU6-727P-201ENST00000363592 107 ntBASIC1.66□□□□□ -2.14
PDGFRAP16234 Y_RNA.166-201ENST00000363730 102 ntBASIC1.66□□□□□ -2.14
PDGFRAP16234 RNA5SP363-201ENST00000365072 115 ntBASIC1.66□□□□□ -2.14
PDGFRAP16234 RNU6-281P-201ENST00000384212 103 ntBASIC1.66□□□□□ -2.14
PDGFRAP16234 Y_RNA.473-201ENST00000384333 102 ntBASIC1.66□□□□□ -2.14
PDGFRAP16234 RNU6-417P-201ENST00000384712 107 ntBASIC1.66□□□□□ -2.14
PDGFRAP16234 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.66□□□□□ -2.14
PDGFRAP16234 AC116353.2-201ENST00000505332 712 ntBASIC1.66□□□□□ -2.14
PDGFRAP16234 SNORA20.3-201ENST00000516880 132 ntBASIC1.66□□□□□ -2.14
PDGFRAP16234 AC105029.1-201ENST00000520250 669 ntBASIC1.66□□□□□ -2.14
PDGFRAP16234 AC024995.1-201ENST00000523014 93 ntBASIC1.66□□□□□ -2.14
PDGFRAP16234 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC1.66□□□□□ -2.14
PDGFRAP16234 AC005668.1-201ENST00000571142 476 ntBASIC1.66□□□□□ -2.14
PDGFRAP16234 MIR5695-201ENST00000579717 85 ntBASIC1.66□□□□□ -2.14
PDGFRAP16234 MZT1P2-201ENST00000604387 248 ntBASIC1.66□□□□□ -2.14
PDGFRAP16234 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.66□□□□□ -2.14
PDGFRAP16234 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.15
PDGFRAP16234 Y_RNA.106-201ENST00000363189 100 ntBASIC1.65□□□□□ -2.15
PDGFRAP16234 RNU6-338P-201ENST00000383888 105 ntBASIC1.65□□□□□ -2.15
PDGFRAP16234 RNU6-997P-201ENST00000384725 107 ntBASIC1.65□□□□□ -2.15
PDGFRAP16234 MIR190B-201ENST00000401119 79 ntBASIC1.65□□□□□ -2.15
PDGFRAP16234 USP9YP16-201ENST00000430287 407 ntBASIC1.65□□□□□ -2.15
PDGFRAP16234 JTBP1-201ENST00000441314 247 ntBASIC1.65□□□□□ -2.15
PDGFRAP16234 USP9YP23-201ENST00000455085 407 ntBASIC1.65□□□□□ -2.15
PDGFRAP16234 PRDX4P1-201ENST00000507189 574 ntBASIC1.65□□□□□ -2.15
PDGFRAP16234 SNORA77B-201ENST00000578179 125 ntBASIC1.65□□□□□ -2.15
PDGFRAP16234 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.65□□□□□ -2.15
PDGFRAP16234 AC009229.3-201ENST00000608056 282 ntBASIC1.65□□□□□ -2.15
PDGFRAP16234 AC099654.14-201ENST00000638599 341 ntBASIC1.65□□□□□ -2.15
PDGFRAP16234 MTND5P16-201ENST00000460269 1703 ntBASIC1.64□□□□□ -2.15
PDGFRAP16234 RNY1P16-201ENST00000363063 111 ntBASIC1.64□□□□□ -2.15
PDGFRAP16234 SNORA33-201ENST00000363664 130 ntBASIC1.64□□□□□ -2.15
PDGFRAP16234 RNU6-700P-201ENST00000391043 107 ntBASIC1.64□□□□□ -2.15
PDGFRAP16234 MIR1267-201ENST00000408723 78 ntBASIC1.64□□□□□ -2.15
PDGFRAP16234 MTCYBP10-201ENST00000424905 650 ntBASIC1.64□□□□□ -2.15
PDGFRAP16234 AC108667.1-201ENST00000428618 249 ntBASIC1.64□□□□□ -2.15
PDGFRAP16234 MTND3P10-201ENST00000450967 341 ntBASIC1.64□□□□□ -2.15
PDGFRAP16234 AC103851.1-201ENST00000506833 274 ntBASIC1.64□□□□□ -2.15
PDGFRAP16234 Y_RNA.683-201ENST00000516508 93 ntBASIC1.64□□□□□ -2.15
PDGFRAP16234 AC090617.3-201ENST00000573670 475 ntBASIC1.64□□□□□ -2.15
PDGFRAP16234 AC005899.2-201ENST00000584353 90 ntBASIC1.64□□□□□ -2.15
PDGFRAP16234 AC022306.2-201ENST00000617563 647 ntBASIC1.64□□□□□ -2.15
PDGFRAP16234 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
PDGFRAP16234 MTND5P35-201ENST00000557537 1720 ntBASIC1.63□□□□□ -2.15
PDGFRAP16234 RNU6-222P-201ENST00000362438 107 ntBASIC1.63□□□□□ -2.15
PDGFRAP16234 SNORD81.2-201ENST00000365153 76 ntBASIC1.63□□□□□ -2.15
PDGFRAP16234 Y_RNA.364-201ENST00000365532 101 ntBASIC1.63□□□□□ -2.15
PDGFRAP16234 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.63□□□□□ -2.15
PDGFRAP16234 RNA5SP467-201ENST00000391274 118 ntBASIC1.63□□□□□ -2.15
PDGFRAP16234 AC138393.2-201ENST00000414742 246 ntBASIC1.63□□□□□ -2.15
PDGFRAP16234 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC1.63□□□□□ -2.15
PDGFRAP16234 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC1.63□□□□□ -2.15
PDGFRAP16234 AC073910.1-201ENST00000445047 438 ntBASIC1.63□□□□□ -2.15
PDGFRAP16234 snoU13.9-201ENST00000458927 103 ntBASIC1.63□□□□□ -2.15
PDGFRAP16234 AC005908.1-201ENST00000468701 347 ntBASIC1.63□□□□□ -2.15
PDGFRAP16234 MTND4P17-201ENST00000470444 350 ntBASIC1.63□□□□□ -2.15
PDGFRAP16234 RPL7P42-201ENST00000481005 679 ntBASIC1.63□□□□□ -2.15
PDGFRAP16234 RNA5SP458-201ENST00000516188 119 ntBASIC1.63□□□□□ -2.15
PDGFRAP16234 Y_RNA.691-201ENST00000516611 103 ntBASIC1.63□□□□□ -2.15
PDGFRAP16234 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC1.63□□□□□ -2.15
PDGFRAP16234 MIR4303-201ENST00000581299 66 ntBASIC1.63□□□□□ -2.15
PDGFRAP16234 uc_338.5-201ENST00000611839 155 ntBASIC1.63□□□□□ -2.15
PDGFRAP16234 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC1.63□□□□□ -2.15
PDGFRAP16234 AC099654.5-201ENST00000636479 350 ntBASIC1.63□□□□□ -2.15
PDGFRAP16234 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC1.62□□□□□ -2.15
PDGFRAP16234 Y_RNA.404-201ENST00000383978 102 ntBASIC1.62□□□□□ -2.15
PDGFRAP16234 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
PDGFRAP16234 EIF1P2-201ENST00000428233 350 ntBASIC1.62□□□□□ -2.15
PDGFRAP16234 MTND4P18-201ENST00000447010 465 ntBASIC1.62□□□□□ -2.15
PDGFRAP16234 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.62□□□□□ -2.15
PDGFRAP16234 HMGN1P12-201ENST00000499125 195 ntBASIC1.62□□□□□ -2.15
PDGFRAP16234 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.62□□□□□ -2.15
PDGFRAP16234 CYCSP23-201ENST00000519781 313 ntBASIC1.62□□□□□ -2.15
PDGFRAP16234 AC093023.1-201ENST00000547375 507 ntBASIC1.62□□□□□ -2.15
PDGFRAP16234 SNORD53B-201ENST00000577887 78 ntBASIC1.62□□□□□ -2.15
PDGFRAP16234 AP000942.3-201ENST00000603702 160 ntBASIC1.62□□□□□ -2.15
PDGFRAP16234 BX248123.2-201ENST00000606318 124 ntBASIC1.62□□□□□ -2.15
PDGFRAP16234 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.62□□□□□ -2.15
PDGFRAP16234 PISRT1.1-201ENST00000616930 107 ntBASIC1.62□□□□□ -2.15
PDGFRAP16234 TPTEP1-208ENST00000636884 213 ntBASIC1.62□□□□□ -2.15
PDGFRAP16234 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
PDGFRAP16234 WWP1P1-201ENST00000466609 2769 ntBASIC1.62□□□□□ -2.15
PDGFRAP16234 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 130.1 ms