Protein–RNA interactions for Protein: P13378

HOXD8, Homeobox protein Hox-D8, humanhuman

Predicted RBP Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD8P13378 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.67□□□□□ -1.82
HOXD8P13378 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC3.67□□□□□ -1.82
HOXD8P13378 snoZ196.1-201ENST00000625269 89 ntBASIC3.67□□□□□ -1.82
HOXD8P13378 U6.98-201ENST00000637157 84 ntBASIC3.67□□□□□ -1.82
HOXD8P13378 CENPCP1-201ENST00000533085 2578 ntBASIC3.67□□□□□ -1.82
HOXD8P13378 AC017071.1-201ENST00000564407 2204 ntBASIC3.67□□□□□ -1.82
HOXD8P13378 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
HOXD8P13378 RNY1P11-201ENST00000363759 113 ntBASIC3.66□□□□□ -1.82
HOXD8P13378 RNU6-1323P-201ENST00000384025 107 ntBASIC3.66□□□□□ -1.82
HOXD8P13378 Y_RNA.432-201ENST00000384087 111 ntBASIC3.66□□□□□ -1.82
HOXD8P13378 RNU6-1144P-201ENST00000384247 104 ntBASIC3.66□□□□□ -1.82
HOXD8P13378 RNU6-301P-201ENST00000384277 107 ntBASIC3.66□□□□□ -1.82
HOXD8P13378 RNU6-429P-201ENST00000384582 108 ntBASIC3.66□□□□□ -1.82
HOXD8P13378 Y_RNA.563-201ENST00000384707 108 ntBASIC3.66□□□□□ -1.82
HOXD8P13378 AL031121.1-201ENST00000406553 254 ntBASIC3.66□□□□□ -1.82
HOXD8P13378 AL135786.1-201ENST00000415892 214 ntBASIC3.66□□□□□ -1.82
HOXD8P13378 AL031183.1-201ENST00000457667 207 ntBASIC3.66□□□□□ -1.82
HOXD8P13378 AC021205.2-201ENST00000480069 347 ntBASIC3.66□□□□□ -1.82
HOXD8P13378 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC3.66□□□□□ -1.82
HOXD8P13378 MIR4738-201ENST00000579134 87 ntBASIC3.66□□□□□ -1.82
HOXD8P13378 MIR2682-201ENST00000580305 110 ntBASIC3.66□□□□□ -1.82
HOXD8P13378 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.66□□□□□ -1.82
HOXD8P13378 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
HOXD8P13378 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
HOXD8P13378 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
HOXD8P13378 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.65□□□□□ -1.82
HOXD8P13378 RNU1-105P-201ENST00000363470 161 ntBASIC3.65□□□□□ -1.83
HOXD8P13378 SNORD32B-201ENST00000364460 84 ntBASIC3.65□□□□□ -1.83
HOXD8P13378 Y_RNA.251-201ENST00000364551 99 ntBASIC3.65□□□□□ -1.83
HOXD8P13378 RNU6-597P-201ENST00000365620 102 ntBASIC3.65□□□□□ -1.83
HOXD8P13378 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
HOXD8P13378 RNU6-1336P-201ENST00000383886 109 ntBASIC3.65□□□□□ -1.83
HOXD8P13378 SNORA7.4-201ENST00000384249 137 ntBASIC3.65□□□□□ -1.83
HOXD8P13378 RNA5SP496-201ENST00000391240 109 ntBASIC3.65□□□□□ -1.83
HOXD8P13378 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC3.65□□□□□ -1.83
HOXD8P13378 EIF4EP4-201ENST00000424916 578 ntBASIC3.65□□□□□ -1.83
HOXD8P13378 SNRPGP8-201ENST00000454064 226 ntBASIC3.65□□□□□ -1.83
HOXD8P13378 AC016925.1-201ENST00000458303 298 ntBASIC3.65□□□□□ -1.83
HOXD8P13378 AC010598.1-201ENST00000510378 103 ntBASIC3.65□□□□□ -1.83
HOXD8P13378 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.65□□□□□ -1.83
HOXD8P13378 RNU5E-3P-201ENST00000515913 68 ntBASIC3.65□□□□□ -1.83
HOXD8P13378 RNA5SP20-201ENST00000515976 84 ntBASIC3.65□□□□□ -1.83
HOXD8P13378 Y_RNA.692-201ENST00000516627 105 ntBASIC3.65□□□□□ -1.83
HOXD8P13378 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.65□□□□□ -1.83
HOXD8P13378 AL049861.1-201ENST00000603130 150 ntBASIC3.65□□□□□ -1.83
HOXD8P13378 AC012640.5-201ENST00000623897 319 ntBASIC3.65□□□□□ -1.83
HOXD8P13378 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.65□□□□□ -1.83
HOXD8P13378 AC010680.1-201ENST00000590024 3590 ntBASIC3.65□□□□□ -1.83
HOXD8P13378 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.65□□□□□ -1.83
HOXD8P13378 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
HOXD8P13378 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.65□□□□□ -1.83
HOXD8P13378 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.65□□□□□ -1.83
HOXD8P13378 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.64□□□□□ -1.83
HOXD8P13378 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
HOXD8P13378 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
HOXD8P13378 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
HOXD8P13378 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.64□□□□□ -1.83
HOXD8P13378 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
HOXD8P13378 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
HOXD8P13378 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.64□□□□□ -1.83
HOXD8P13378 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
HOXD8P13378 RNA5SP295-201ENST00000362655 121 ntBASIC3.64□□□□□ -1.83
HOXD8P13378 RNY4P18-201ENST00000391107 89 ntBASIC3.64□□□□□ -1.83
HOXD8P13378 AC023449.1-201ENST00000454464 154 ntBASIC3.64□□□□□ -1.83
HOXD8P13378 RPL23AP67-201ENST00000465341 474 ntBASIC3.64□□□□□ -1.83
HOXD8P13378 RNU6-63P-201ENST00000516690 95 ntBASIC3.64□□□□□ -1.83
HOXD8P13378 RNA5SP170-201ENST00000517150 101 ntBASIC3.64□□□□□ -1.83
HOXD8P13378 AC103810.1-201ENST00000579873 453 ntBASIC3.64□□□□□ -1.83
HOXD8P13378 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
HOXD8P13378 AL159152.1-201ENST00000635019 2587 ntBASIC3.64□□□□□ -1.83
HOXD8P13378 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
HOXD8P13378 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.63□□□□□ -1.83
HOXD8P13378 RNA5SP354-201ENST00000391247 136 ntBASIC3.63□□□□□ -1.83
HOXD8P13378 AP000567.1-201ENST00000406413 156 ntBASIC3.63□□□□□ -1.83
HOXD8P13378 AC126124.2-201ENST00000413542 321 ntBASIC3.63□□□□□ -1.83
HOXD8P13378 AC002075.2-201ENST00000425207 252 ntBASIC3.63□□□□□ -1.83
HOXD8P13378 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.63□□□□□ -1.83
HOXD8P13378 SNORD65B-201ENST00000459126 73 ntBASIC3.63□□□□□ -1.83
HOXD8P13378 RN7SL863P-201ENST00000462370 296 ntBASIC3.63□□□□□ -1.83
HOXD8P13378 AC090515.1-201ENST00000465295 476 ntBASIC3.63□□□□□ -1.83
HOXD8P13378 RNA5SP112-201ENST00000515937 99 ntBASIC3.63□□□□□ -1.83
HOXD8P13378 RNU6-772P-201ENST00000516042 105 ntBASIC3.63□□□□□ -1.83
HOXD8P13378 RNA5SP341-201ENST00000516261 117 ntBASIC3.63□□□□□ -1.83
HOXD8P13378 RNU6-1299P-201ENST00000516316 100 ntBASIC3.63□□□□□ -1.83
HOXD8P13378 RNU6-1061P-201ENST00000516530 99 ntBASIC3.63□□□□□ -1.83
HOXD8P13378 RNU6-197P-201ENST00000516680 100 ntBASIC3.63□□□□□ -1.83
HOXD8P13378 Y_RNA.712-201ENST00000517011 92 ntBASIC3.63□□□□□ -1.83
HOXD8P13378 AC133485.4-201ENST00000561835 220 ntBASIC3.63□□□□□ -1.83
HOXD8P13378 AC138907.4-201ENST00000570107 226 ntBASIC3.63□□□□□ -1.83
HOXD8P13378 U7.8-201ENST00000619968 63 ntBASIC3.63□□□□□ -1.83
HOXD8P13378 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.63□□□□□ -1.83
HOXD8P13378 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.63□□□□□ -1.83
HOXD8P13378 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
HOXD8P13378 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.62□□□□□ -1.83
HOXD8P13378 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
HOXD8P13378 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
HOXD8P13378 RNU6-1298P-201ENST00000362456 101 ntBASIC3.62□□□□□ -1.83
HOXD8P13378 RNA5SP126-201ENST00000365092 109 ntBASIC3.62□□□□□ -1.83
HOXD8P13378 SNORD18B-201ENST00000365659 72 ntBASIC3.62□□□□□ -1.83
HOXD8P13378 RNU2-70P-201ENST00000410718 179 ntBASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 116.5 ms