Protein–RNA interactions for Protein: P12111

COL6A3, Collagen alpha-3(VI) chain, humanhuman

Predictions only

Length 3,177 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3P12111 RNU1-142P-201ENST00000516682 145 ntBASIC-0.35□□□□□ -2.47
COL6A3P12111 AC022616.3-201ENST00000523940 148 ntBASIC-0.35□□□□□ -2.47
COL6A3P12111 LRRC6P1-201ENST00000532188 885 ntBASIC-0.35□□□□□ -2.47
COL6A3P12111 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC-0.35□□□□□ -2.47
COL6A3P12111 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC-0.35□□□□□ -2.47
COL6A3P12111 AC068790.2-201ENST00000602601 557 ntBASIC-0.35□□□□□ -2.47
COL6A3P12111 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC-0.35□□□□□ -2.47
COL6A3P12111 MESTIT1_1.1-201ENST00000618871 140 ntBASIC-0.35□□□□□ -2.47
COL6A3P12111 RPL21P38-201ENST00000418090 167 ntBASIC-0.36□□□□□ -2.47
COL6A3P12111 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC-0.36□□□□□ -2.47
COL6A3P12111 AC007000.2-201ENST00000442564 487 ntBASIC-0.36□□□□□ -2.47
COL6A3P12111 MIR3923-201ENST00000579521 83 ntBASIC-0.36□□□□□ -2.47
COL6A3P12111 MIR4637-201ENST00000582405 84 ntBASIC-0.36□□□□□ -2.47
COL6A3P12111 BNIP3P9-201ENST00000603714 553 ntBASIC-0.36□□□□□ -2.47
COL6A3P12111 SNORD38B-202ENST00000625943 69 ntBASIC-0.36□□□□□ -2.47
COL6A3P12111 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC-0.36□□□□□ -2.47
COL6A3P12111 SNORD114-14-201ENST00000362723 75 ntBASIC-0.36□□□□□ -2.47
COL6A3P12111 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC-0.36□□□□□ -2.47
COL6A3P12111 RNU6-843P-201ENST00000384454 104 ntBASIC-0.36□□□□□ -2.47
COL6A3P12111 MIR520C-201ENST00000385005 87 ntBASIC-0.36□□□□□ -2.47
COL6A3P12111 RNU6-932P-201ENST00000391108 106 ntBASIC-0.36□□□□□ -2.47
COL6A3P12111 MIR891A-201ENST00000401237 79 ntBASIC-0.36□□□□□ -2.47
COL6A3P12111 RNA5SP390-201ENST00000410191 113 ntBASIC-0.36□□□□□ -2.47
COL6A3P12111 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC-0.36□□□□□ -2.47
COL6A3P12111 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC-0.36□□□□□ -2.47
COL6A3P12111 Y_RNA.658-201ENST00000515990 97 ntBASIC-0.36□□□□□ -2.47
COL6A3P12111 RNU6-475P-201ENST00000516073 104 ntBASIC-0.36□□□□□ -2.47
COL6A3P12111 DEFB131D-201ENST00000526803 184 ntBASIC-0.36□□□□□ -2.47
COL6A3P12111 DEFB131C-201ENST00000528817 165 ntBASIC-0.36□□□□□ -2.47
COL6A3P12111 RPL21P9-201ENST00000556149 474 ntBASIC-0.36□□□□□ -2.47
COL6A3P12111 AC090897.1-201ENST00000580909 226 ntBASIC-0.36□□□□□ -2.47
COL6A3P12111 MIR3192-201ENST00000584920 77 ntBASIC-0.36□□□□□ -2.47
COL6A3P12111 RNU6-28P-201ENST00000362378 107 ntBASIC-0.37□□□□□ -2.47
COL6A3P12111 RNU6-534P-201ENST00000364877 106 ntBASIC-0.37□□□□□ -2.47
COL6A3P12111 RNU6-701P-201ENST00000384059 107 ntBASIC-0.37□□□□□ -2.47
COL6A3P12111 RNU6-1029P-201ENST00000384109 107 ntBASIC-0.37□□□□□ -2.47
COL6A3P12111 RNU6-480P-201ENST00000384332 107 ntBASIC-0.37□□□□□ -2.47
COL6A3P12111 MIR544A-201ENST00000384855 91 ntBASIC-0.37□□□□□ -2.47
COL6A3P12111 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC-0.37□□□□□ -2.47
COL6A3P12111 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC-0.37□□□□□ -2.47
COL6A3P12111 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC-0.37□□□□□ -2.47
COL6A3P12111 MRPS10P2-201ENST00000431226 381 ntBASIC-0.37□□□□□ -2.47
COL6A3P12111 MTCYBP39-201ENST00000437562 491 ntBASIC-0.37□□□□□ -2.47
COL6A3P12111 EEF1E1P1-201ENST00000446998 430 ntBASIC-0.37□□□□□ -2.47
COL6A3P12111 AL122001.1-201ENST00000457027 370 ntBASIC-0.37□□□□□ -2.47
COL6A3P12111 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC-0.37□□□□□ -2.47
COL6A3P12111 USP9YP25-201ENST00000457708 443 ntBASIC-0.37□□□□□ -2.47
COL6A3P12111 AC114982.2-201ENST00000461396 358 ntBASIC-0.37□□□□□ -2.47
COL6A3P12111 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC-0.37□□□□□ -2.47
COL6A3P12111 AC104383.1-201ENST00000530297 370 ntBASIC-0.37□□□□□ -2.47
COL6A3P12111 UBE2Q2P8-201ENST00000560644 102 ntBASIC-0.37□□□□□ -2.47
COL6A3P12111 AC138207.3-201ENST00000585289 166 ntBASIC-0.37□□□□□ -2.47
COL6A3P12111 RNU6-78P-201ENST00000362897 107 ntBASIC-0.37□□□□□ -2.47
COL6A3P12111 SNORD114-25-201ENST00000363742 72 ntBASIC-0.37□□□□□ -2.47
COL6A3P12111 SNORD32B-201ENST00000364460 84 ntBASIC-0.37□□□□□ -2.47
COL6A3P12111 MIR10A-201ENST00000385043 110 ntBASIC-0.37□□□□□ -2.47
COL6A3P12111 SNORA75.1-201ENST00000391130 148 ntBASIC-0.37□□□□□ -2.47
COL6A3P12111 AL136310.1-201ENST00000404926 654 ntBASIC-0.37□□□□□ -2.47
COL6A3P12111 AL590002.1-201ENST00000406554 418 ntBASIC-0.37□□□□□ -2.47
COL6A3P12111 RNU6-77P-201ENST00000410554 91 ntBASIC-0.37□□□□□ -2.47
COL6A3P12111 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC-0.37□□□□□ -2.47
COL6A3P12111 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC-0.37□□□□□ -2.47
COL6A3P12111 MTND1P4-201ENST00000435196 415 ntBASIC-0.37□□□□□ -2.47
COL6A3P12111 AC010531.2-201ENST00000465012 153 ntBASIC-0.37□□□□□ -2.47
COL6A3P12111 AC109445.1-201ENST00000512356 383 ntBASIC-0.37□□□□□ -2.47
COL6A3P12111 RNU7-129P-201ENST00000516128 62 ntBASIC-0.37□□□□□ -2.47
COL6A3P12111 MIR4778-201ENST00000577635 80 ntBASIC-0.37□□□□□ -2.47
COL6A3P12111 MIR4306-201ENST00000583390 91 ntBASIC-0.37□□□□□ -2.47
COL6A3P12111 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC-0.37□□□□□ -2.47
COL6A3P12111 RBM11P1-201ENST00000604951 799 ntBASIC-0.37□□□□□ -2.47
COL6A3P12111 AL139022.2-201ENST00000606934 443 ntBASIC-0.37□□□□□ -2.47
COL6A3P12111 AC245008.1-201ENST00000608123 476 ntBASIC-0.37□□□□□ -2.47
COL6A3P12111 AC008250.2-201ENST00000615261 205 ntBASIC-0.37□□□□□ -2.47
COL6A3P12111 AC068792.1-201ENST00000621354 417 ntBASIC-0.37□□□□□ -2.47
COL6A3P12111 AL359697.1-201ENST00000624879 587 ntBASIC-0.37□□□□□ -2.47
COL6A3P12111 TTK-211ENST00000627129 240 ntTSL 5 BASIC-0.37□□□□□ -2.47
COL6A3P12111 U6.108-201ENST00000637764 58 ntBASIC-0.37□□□□□ -2.47
COL6A3P12111 SGO1P1-201ENST00000603525 1447 ntBASIC-0.37□□□□□ -2.47
COL6A3P12111 RNU6-396P-201ENST00000365369 105 ntBASIC-0.37□□□□□ -2.47
COL6A3P12111 RNU6-114P-201ENST00000384704 105 ntBASIC-0.37□□□□□ -2.47
COL6A3P12111 RNU4-30P-201ENST00000410245 143 ntBASIC-0.37□□□□□ -2.47
COL6A3P12111 MTCO2P5-201ENST00000422621 426 ntBASIC-0.37□□□□□ -2.47
COL6A3P12111 AC015818.7-201ENST00000428754 109 ntBASIC-0.37□□□□□ -2.47
COL6A3P12111 AC087499.7-201ENST00000441958 109 ntBASIC-0.37□□□□□ -2.47
COL6A3P12111 AL139824.2-201ENST00000458731 1095 ntBASIC-0.37□□□□□ -2.47
COL6A3P12111 RNU6-123P-201ENST00000516163 102 ntBASIC-0.37□□□□□ -2.47
COL6A3P12111 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC-0.37□□□□□ -2.47
COL6A3P12111 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC-0.37□□□□□ -2.47
COL6A3P12111 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC-0.37□□□□□ -2.47
COL6A3P12111 RNU6-169P-201ENST00000365336 107 ntBASIC-0.38□□□□□ -2.47
COL6A3P12111 RNU6-487P-201ENST00000365430 104 ntBASIC-0.38□□□□□ -2.47
COL6A3P12111 RNU6-278P-201ENST00000390945 109 ntBASIC-0.38□□□□□ -2.47
COL6A3P12111 FGFR1OP2P1-201ENST00000395943 500 ntBASIC-0.38□□□□□ -2.47
COL6A3P12111 AC106883.1-201ENST00000418805 562 ntBASIC-0.38□□□□□ -2.47
COL6A3P12111 TIMM9P3-201ENST00000428659 274 ntBASIC-0.38□□□□□ -2.47
COL6A3P12111 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC-0.38□□□□□ -2.47
COL6A3P12111 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC-0.38□□□□□ -2.47
COL6A3P12111 AL392103.1-201ENST00000447000 198 ntBASIC-0.38□□□□□ -2.47
COL6A3P12111 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC-0.38□□□□□ -2.47
COL6A3P12111 SNORD111.1-201ENST00000516421 86 ntBASIC-0.38□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 116.2 ms