Protein–RNA interactions for Protein: P08100

RHO, Rhodopsin, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHOP08100 Y_RNA.269-201ENST00000364685 89 ntBASIC2.65□□□□□ -1.99
RHOP08100 Y_RNA.275-201ENST00000364726 110 ntBASIC2.65□□□□□ -1.99
RHOP08100 RNU6-514P-201ENST00000384208 107 ntBASIC2.65□□□□□ -1.99
RHOP08100 SNORA12-201ENST00000391162 147 ntBASIC2.65□□□□□ -1.99
RHOP08100 RNU6-1199P-201ENST00000411249 104 ntBASIC2.65□□□□□ -1.99
RHOP08100 RNA5SP492-201ENST00000411330 114 ntBASIC2.65□□□□□ -1.99
RHOP08100 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC2.65□□□□□ -1.99
RHOP08100 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.65□□□□□ -1.99
RHOP08100 AC092427.1-202ENST00000430569 476 ntBASIC2.65□□□□□ -1.99
RHOP08100 MTCO1P5-201ENST00000433573 344 ntBASIC2.65□□□□□ -1.99
RHOP08100 RPL23AP3-201ENST00000453844 468 ntBASIC2.65□□□□□ -1.99
RHOP08100 RNU6-966P-201ENST00000516479 104 ntBASIC2.65□□□□□ -1.99
RHOP08100 RNU2-44P-201ENST00000516795 194 ntBASIC2.65□□□□□ -1.99
RHOP08100 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.65□□□□□ -1.99
RHOP08100 AL109918.3-201ENST00000603072 338 ntBASIC2.65□□□□□ -1.99
RHOP08100 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
RHOP08100 Y_RNA.65-201ENST00000362846 100 ntBASIC2.64□□□□□ -1.99
RHOP08100 MIR592-201ENST00000384959 97 ntBASIC2.64□□□□□ -1.99
RHOP08100 U6atac.2-201ENST00000408644 118 ntBASIC2.64□□□□□ -1.99
RHOP08100 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.64□□□□□ -1.99
RHOP08100 RNU4-53P-201ENST00000410828 140 ntBASIC2.64□□□□□ -1.99
RHOP08100 RNU6-1328P-201ENST00000410938 106 ntBASIC2.64□□□□□ -1.99
RHOP08100 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.64□□□□□ -1.99
RHOP08100 TOMM22P2-201ENST00000430735 237 ntBASIC2.64□□□□□ -1.99
RHOP08100 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.64□□□□□ -1.99
RHOP08100 MRPS10P1-201ENST00000448483 130 ntBASIC2.64□□□□□ -1.99
RHOP08100 AC091959.1-201ENST00000495857 238 ntBASIC2.64□□□□□ -1.99
RHOP08100 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.64□□□□□ -1.99
RHOP08100 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.64□□□□□ -1.99
RHOP08100 RNA5SP76-201ENST00000516277 87 ntBASIC2.64□□□□□ -1.99
RHOP08100 RN7SKP40-201ENST00000517211 242 ntBASIC2.64□□□□□ -1.99
RHOP08100 RNU2-12P-201ENST00000517216 168 ntBASIC2.64□□□□□ -1.99
RHOP08100 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.64□□□□□ -1.99
RHOP08100 AC018630.3-201ENST00000542637 96 ntBASIC2.64□□□□□ -1.99
RHOP08100 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.64□□□□□ -1.99
RHOP08100 AL162424.1-201ENST00000602325 221 ntBASIC2.64□□□□□ -1.99
RHOP08100 AC098479.1-201ENST00000609225 154 ntBASIC2.64□□□□□ -1.99
RHOP08100 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
RHOP08100 Y_RNA.82-201ENST00000363000 102 ntBASIC2.63□□□□□ -1.99
RHOP08100 Y_RNA.92-201ENST00000363043 102 ntBASIC2.63□□□□□ -1.99
RHOP08100 U3.8-201ENST00000363675 217 ntBASIC2.63□□□□□ -1.99
RHOP08100 Y_RNA.200-201ENST00000364018 102 ntBASIC2.63□□□□□ -1.99
RHOP08100 RNU6-461P-201ENST00000364195 107 ntBASIC2.63□□□□□ -1.99
RHOP08100 Y_RNA.235-201ENST00000364412 102 ntBASIC2.63□□□□□ -1.99
RHOP08100 Y_RNA.306-201ENST00000365015 102 ntBASIC2.63□□□□□ -1.99
RHOP08100 Y_RNA.312-201ENST00000365089 102 ntBASIC2.63□□□□□ -1.99
RHOP08100 Y_RNA.322-201ENST00000365151 102 ntBASIC2.63□□□□□ -1.99
RHOP08100 Z98742.3-201ENST00000418637 326 ntBASIC2.63□□□□□ -1.99
RHOP08100 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC2.63□□□□□ -1.99
RHOP08100 Y_RNA.650-201ENST00000459002 102 ntBASIC2.63□□□□□ -1.99
RHOP08100 COX6CP14-201ENST00000469580 174 ntBASIC2.63□□□□□ -1.99
RHOP08100 SNORA27.4-201ENST00000516650 95 ntBASIC2.63□□□□□ -1.99
RHOP08100 Y_RNA.777-201ENST00000516982 102 ntBASIC2.63□□□□□ -1.99
RHOP08100 HSPE1P18-201ENST00000517602 280 ntBASIC2.63□□□□□ -1.99
RHOP08100 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.63□□□□□ -1.99
RHOP08100 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.63□□□□□ -1.99
RHOP08100 MIR4282-201ENST00000583613 67 ntBASIC2.63□□□□□ -1.99
RHOP08100 Y_RNA.771-201ENST00000598668 102 ntBASIC2.63□□□□□ -1.99
RHOP08100 AL713866.2-201ENST00000603579 219 ntBASIC2.63□□□□□ -1.99
RHOP08100 Y_RNA.789-201ENST00000622480 102 ntBASIC2.63□□□□□ -1.99
RHOP08100 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
RHOP08100 Z82209.1-201ENST00000422141 2135 ntBASIC2.63□□□□□ -1.99
RHOP08100 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
RHOP08100 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
RHOP08100 Y_RNA.76-201ENST00000362931 109 ntBASIC2.62□□□□□ -1.99
RHOP08100 Y_RNA.117-201ENST00000363294 101 ntBASIC2.62□□□□□ -1.99
RHOP08100 Y_RNA.274-201ENST00000364714 101 ntBASIC2.62□□□□□ -1.99
RHOP08100 RNU6-740P-201ENST00000364734 105 ntBASIC2.62□□□□□ -1.99
RHOP08100 RNU6-1274P-201ENST00000384557 107 ntBASIC2.62□□□□□ -1.99
RHOP08100 MIR586-201ENST00000385035 97 ntBASIC2.62□□□□□ -1.99
RHOP08100 MIR1298-201ENST00000408783 112 ntBASIC2.62□□□□□ -1.99
RHOP08100 Y_RNA.597-201ENST00000410463 100 ntBASIC2.62□□□□□ -1.99
RHOP08100 RNA5SP475-201ENST00000410568 110 ntBASIC2.62□□□□□ -1.99
RHOP08100 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.62□□□□□ -1.99
RHOP08100 RPL30P4-201ENST00000429309 333 ntBASIC2.62□□□□□ -1.99
RHOP08100 RNU6-155P-201ENST00000516347 100 ntBASIC2.62□□□□□ -1.99
RHOP08100 RPPH1-2P-201ENST00000516688 293 ntBASIC2.62□□□□□ -1.99
RHOP08100 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC2.62□□□□□ -1.99
RHOP08100 MIR3117-201ENST00000584034 78 ntBASIC2.62□□□□□ -1.99
RHOP08100 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.62□□□□□ -1.99
RHOP08100 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.61□□□□□ -1.99
RHOP08100 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC2.61□□□□□ -1.99
RHOP08100 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.61□□□□□ -1.99
RHOP08100 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
RHOP08100 Y_RNA.29-201ENST00000362570 113 ntBASIC2.61□□□□□ -1.99
RHOP08100 RNU6-454P-201ENST00000364292 107 ntBASIC2.61□□□□□ -1.99
RHOP08100 SNORD114-30-201ENST00000364448 72 ntBASIC2.61□□□□□ -1.99
RHOP08100 SNORD87-201ENST00000364849 89 ntBASIC2.61□□□□□ -1.99
RHOP08100 AL359511.1-201ENST00000402970 211 ntBASIC2.61□□□□□ -1.99
RHOP08100 AL445687.1-201ENST00000439946 251 ntBASIC2.61□□□□□ -1.99
RHOP08100 SNORD2.1-201ENST00000458762 69 ntBASIC2.61□□□□□ -1.99
RHOP08100 AC080013.2-201ENST00000460866 323 ntBASIC2.61□□□□□ -1.99
RHOP08100 AC140059.1-201ENST00000489238 361 ntBASIC2.61□□□□□ -1.99
RHOP08100 RN7SL636P-201ENST00000497504 294 ntBASIC2.61□□□□□ -1.99
RHOP08100 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC2.61□□□□□ -1.99
RHOP08100 SCARNA3-201ENST00000517097 143 ntBASIC2.61□□□□□ -1.99
RHOP08100 SNORA81.3-201ENST00000517283 198 ntBASIC2.61□□□□□ -1.99
RHOP08100 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.61□□□□□ -1.99
RHOP08100 AC105245.1-201ENST00000581934 244 ntBASIC2.61□□□□□ -1.99
RHOP08100 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.61□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 139 ms