Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 MIR515-1-201ENST00000384884 83 ntBASIC1.45□□□□□ -2.18
SFTPBP07988 RNA5SP109-201ENST00000391010 116 ntBASIC1.45□□□□□ -2.18
SFTPBP07988 MIR1185-2-201ENST00000408687 86 ntBASIC1.45□□□□□ -2.18
SFTPBP07988 RNU6-1050P-201ENST00000410388 107 ntBASIC1.45□□□□□ -2.18
SFTPBP07988 AC074085.1-201ENST00000413598 418 ntBASIC1.45□□□□□ -2.18
SFTPBP07988 USP9YP16-201ENST00000430287 407 ntBASIC1.45□□□□□ -2.18
SFTPBP07988 AL353997.1-201ENST00000432936 108 ntBASIC1.45□□□□□ -2.18
SFTPBP07988 USP9YP23-201ENST00000455085 407 ntBASIC1.45□□□□□ -2.18
SFTPBP07988 AL163195.1-201ENST00000496941 348 ntBASIC1.45□□□□□ -2.18
SFTPBP07988 AC093303.1-201ENST00000514549 295 ntBASIC1.45□□□□□ -2.18
SFTPBP07988 MTND4LP26-201ENST00000518144 282 ntBASIC1.45□□□□□ -2.18
SFTPBP07988 snoU13.31-201ENST00000607291 104 ntBASIC1.45□□□□□ -2.18
SFTPBP07988 AC100812.1-201ENST00000607622 580 ntBASIC1.45□□□□□ -2.18
SFTPBP07988 AC005014.2-201ENST00000607795 599 ntBASIC1.45□□□□□ -2.18
SFTPBP07988 AC010999.1-201ENST00000611856 324 ntBASIC1.45□□□□□ -2.18
SFTPBP07988 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.45□□□□□ -2.18
SFTPBP07988 MTND5P35-201ENST00000557537 1720 ntBASIC1.44□□□□□ -2.18
SFTPBP07988 Y_RNA.67-201ENST00000362870 100 ntBASIC1.44□□□□□ -2.18
SFTPBP07988 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC1.44□□□□□ -2.18
SFTPBP07988 FTH1P12-201ENST00000432137 551 ntBASIC1.44□□□□□ -2.18
SFTPBP07988 AC005002.2-201ENST00000438228 269 ntBASIC1.44□□□□□ -2.18
SFTPBP07988 AL606517.2-201ENST00000442855 241 ntBASIC1.44□□□□□ -2.18
SFTPBP07988 AC107399.1-201ENST00000451226 265 ntBASIC1.44□□□□□ -2.18
SFTPBP07988 NDUFB4P10-201ENST00000452541 359 ntBASIC1.44□□□□□ -2.18
SFTPBP07988 RPL7P42-201ENST00000481005 679 ntBASIC1.44□□□□□ -2.18
SFTPBP07988 HMGN1P12-201ENST00000499125 195 ntBASIC1.44□□□□□ -2.18
SFTPBP07988 RNU6-1114P-201ENST00000516022 107 ntBASIC1.44□□□□□ -2.18
SFTPBP07988 RNU6-250P-201ENST00000516958 103 ntBASIC1.44□□□□□ -2.18
SFTPBP07988 AC091144.1-201ENST00000519573 138 ntBASIC1.44□□□□□ -2.18
SFTPBP07988 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.44□□□□□ -2.18
SFTPBP07988 AC093023.1-201ENST00000547375 507 ntBASIC1.44□□□□□ -2.18
SFTPBP07988 FRG2DP-202ENST00000566967 323 ntBASIC1.44□□□□□ -2.18
SFTPBP07988 MIR502-201ENST00000606349 86 ntBASIC1.44□□□□□ -2.18
SFTPBP07988 AC009229.3-201ENST00000608056 282 ntBASIC1.44□□□□□ -2.18
SFTPBP07988 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC1.44□□□□□ -2.18
SFTPBP07988 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
SFTPBP07988 MTND5P16-201ENST00000460269 1703 ntBASIC1.43□□□□□ -2.18
SFTPBP07988 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.43□□□□□ -2.18
SFTPBP07988 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.43□□□□□ -2.18
SFTPBP07988 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
SFTPBP07988 Y_RNA.72-201ENST00000362894 103 ntBASIC1.43□□□□□ -2.18
SFTPBP07988 Y_RNA.339-201ENST00000365325 102 ntBASIC1.43□□□□□ -2.18
SFTPBP07988 RNU6-281P-201ENST00000384212 103 ntBASIC1.43□□□□□ -2.18
SFTPBP07988 Y_RNA.619-201ENST00000410951 90 ntBASIC1.43□□□□□ -2.18
SFTPBP07988 COX6CP10-201ENST00000416832 224 ntBASIC1.43□□□□□ -2.18
SFTPBP07988 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.43□□□□□ -2.18
SFTPBP07988 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC1.43□□□□□ -2.18
SFTPBP07988 SNORD13-201ENST00000459299 104 ntBASIC1.43□□□□□ -2.18
SFTPBP07988 RNU7-34P-201ENST00000459394 64 ntBASIC1.43□□□□□ -2.18
SFTPBP07988 Y_RNA.673-201ENST00000516306 88 ntBASIC1.43□□□□□ -2.18
SFTPBP07988 RNU6-107P-201ENST00000516643 102 ntBASIC1.43□□□□□ -2.18
SFTPBP07988 RNU7-30P-201ENST00000516835 62 ntBASIC1.43□□□□□ -2.18
SFTPBP07988 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC1.43□□□□□ -2.18
SFTPBP07988 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.43□□□□□ -2.18
SFTPBP07988 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC1.43□□□□□ -2.18
SFTPBP07988 MIR5701-3-201ENST00000578890 82 ntBASIC1.43□□□□□ -2.18
SFTPBP07988 MIR5701-1-201ENST00000585138 82 ntBASIC1.43□□□□□ -2.18
SFTPBP07988 MIR4781-201ENST00000585250 76 ntBASIC1.43□□□□□ -2.18
SFTPBP07988 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC1.43□□□□□ -2.18
SFTPBP07988 MIR5701-2-201ENST00000615634 82 ntBASIC1.43□□□□□ -2.18
SFTPBP07988 U6.108-201ENST00000637764 58 ntBASIC1.43□□□□□ -2.18
SFTPBP07988 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
SFTPBP07988 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
SFTPBP07988 RNU6-1266P-201ENST00000362794 105 ntBASIC1.42□□□□□ -2.18
SFTPBP07988 RNU5F-3P-201ENST00000363767 117 ntBASIC1.42□□□□□ -2.18
SFTPBP07988 Y_RNA.184-201ENST00000363884 108 ntBASIC1.42□□□□□ -2.18
SFTPBP07988 RNU6-593P-201ENST00000364716 112 ntBASIC1.42□□□□□ -2.18
SFTPBP07988 SNORD1A-201ENST00000364968 72 ntBASIC1.42□□□□□ -2.18
SFTPBP07988 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC1.42□□□□□ -2.18
SFTPBP07988 RNU6-997P-201ENST00000384725 107 ntBASIC1.42□□□□□ -2.18
SFTPBP07988 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.42□□□□□ -2.18
SFTPBP07988 RNU1-139P-201ENST00000391307 165 ntBASIC1.42□□□□□ -2.18
SFTPBP07988 RNU6-1186P-201ENST00000410429 97 ntBASIC1.42□□□□□ -2.18
SFTPBP07988 RNU6-1001P-201ENST00000411265 100 ntBASIC1.42□□□□□ -2.18
SFTPBP07988 RPL37P10-201ENST00000412884 288 ntBASIC1.42□□□□□ -2.18
SFTPBP07988 MTND4P18-201ENST00000447010 465 ntBASIC1.42□□□□□ -2.18
SFTPBP07988 MTND3P10-201ENST00000450967 341 ntBASIC1.42□□□□□ -2.18
SFTPBP07988 FGF7P6-202ENST00000451282 293 ntBASIC1.42□□□□□ -2.18
SFTPBP07988 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC1.42□□□□□ -2.18
SFTPBP07988 RNU1-98P-201ENST00000458992 160 ntBASIC1.42□□□□□ -2.18
SFTPBP07988 RNU7-87P-201ENST00000459343 62 ntBASIC1.42□□□□□ -2.18
SFTPBP07988 Y_RNA.683-201ENST00000516508 93 ntBASIC1.42□□□□□ -2.18
SFTPBP07988 RNU1-142P-201ENST00000516682 145 ntBASIC1.42□□□□□ -2.18
SFTPBP07988 Y_RNA.708-201ENST00000516950 96 ntBASIC1.42□□□□□ -2.18
SFTPBP07988 AC024995.1-201ENST00000523014 93 ntBASIC1.42□□□□□ -2.18
SFTPBP07988 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC1.42□□□□□ -2.18
SFTPBP07988 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.42□□□□□ -2.18
SFTPBP07988 MIR4709-201ENST00000577272 72 ntBASIC1.42□□□□□ -2.18
SFTPBP07988 MIR3683-201ENST00000580847 82 ntBASIC1.42□□□□□ -2.18
SFTPBP07988 MIR4422-201ENST00000581938 83 ntBASIC1.42□□□□□ -2.18
SFTPBP07988 AL359075.3-201ENST00000613288 217 ntBASIC1.42□□□□□ -2.18
SFTPBP07988 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.42□□□□□ -2.18
SFTPBP07988 CASC19-280ENST00000642102 1351 ntBASIC1.42□□□□□ -2.18
SFTPBP07988 MIR302D-201ENST00000362275 68 ntBASIC1.41□□□□□ -2.18
SFTPBP07988 RNU6-874P-201ENST00000362390 105 ntBASIC1.41□□□□□ -2.18
SFTPBP07988 Y_RNA.88-201ENST00000363029 99 ntBASIC1.41□□□□□ -2.18
SFTPBP07988 RNY1P16-201ENST00000363063 111 ntBASIC1.41□□□□□ -2.18
SFTPBP07988 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
SFTPBP07988 Y_RNA.404-201ENST00000383978 102 ntBASIC1.41□□□□□ -2.18
SFTPBP07988 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms