Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 RNU4-56P-201ENST00000364700 142 ntBASIC2.84□□□□□ -1.95
HLA-DOAP06340 RNU6-187P-201ENST00000384139 106 ntBASIC2.84□□□□□ -1.95
HLA-DOAP06340 RNU6-514P-201ENST00000384208 107 ntBASIC2.84□□□□□ -1.95
HLA-DOAP06340 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.84□□□□□ -1.95
HLA-DOAP06340 AC005042.3-201ENST00000453230 174 ntBASIC2.84□□□□□ -1.95
HLA-DOAP06340 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.84□□□□□ -1.95
HLA-DOAP06340 AC074133.1-201ENST00000515696 183 ntBASIC2.84□□□□□ -1.95
HLA-DOAP06340 RNA5SP385-201ENST00000515947 110 ntBASIC2.84□□□□□ -1.95
HLA-DOAP06340 RNU6-155P-201ENST00000516347 100 ntBASIC2.84□□□□□ -1.95
HLA-DOAP06340 RNU1-117P-201ENST00000517041 158 ntBASIC2.84□□□□□ -1.95
HLA-DOAP06340 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.84□□□□□ -1.95
HLA-DOAP06340 AC046143.2-201ENST00000609789 160 ntBASIC2.84□□□□□ -1.95
HLA-DOAP06340 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.96
HLA-DOAP06340 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.96
HLA-DOAP06340 AL359854.1-201ENST00000614203 1594 ntBASIC2.83□□□□□ -1.96
HLA-DOAP06340 ANKRD30BP1-201ENST00000451052 2186 ntBASIC2.83□□□□□ -1.96
HLA-DOAP06340 UBE2WP1-201ENST00000362030 340 ntBASIC2.83□□□□□ -1.96
HLA-DOAP06340 RNU6-1210P-201ENST00000363775 107 ntBASIC2.83□□□□□ -1.96
HLA-DOAP06340 SNORA46.1-201ENST00000391069 153 ntBASIC2.83□□□□□ -1.96
HLA-DOAP06340 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.83□□□□□ -1.96
HLA-DOAP06340 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC2.83□□□□□ -1.96
HLA-DOAP06340 EIF4EP4-201ENST00000424916 578 ntBASIC2.83□□□□□ -1.96
HLA-DOAP06340 AL356320.1-201ENST00000429616 163 ntBASIC2.83□□□□□ -1.96
HLA-DOAP06340 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC2.83□□□□□ -1.96
HLA-DOAP06340 AC104332.1-201ENST00000440471 797 ntBASIC2.83□□□□□ -1.96
HLA-DOAP06340 RNU7-120P-201ENST00000459334 63 ntBASIC2.83□□□□□ -1.96
HLA-DOAP06340 Y_RNA.638-201ENST00000459374 113 ntBASIC2.83□□□□□ -1.96
HLA-DOAP06340 AC140059.1-201ENST00000489238 361 ntBASIC2.83□□□□□ -1.96
HLA-DOAP06340 RNU6-191P-201ENST00000516295 94 ntBASIC2.83□□□□□ -1.96
HLA-DOAP06340 RNU6-107P-201ENST00000516643 102 ntBASIC2.83□□□□□ -1.96
HLA-DOAP06340 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC2.83□□□□□ -1.96
HLA-DOAP06340 MIR4506-201ENST00000584693 77 ntBASIC2.83□□□□□ -1.96
HLA-DOAP06340 AC023043.3-201ENST00000593113 385 ntBASIC2.83□□□□□ -1.96
HLA-DOAP06340 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.83□□□□□ -1.96
HLA-DOAP06340 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
HLA-DOAP06340 Z82195.2-201ENST00000612348 18351 ntBASIC2.83□□□□□ -1.96
HLA-DOAP06340 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.83□□□□□ -1.96
HLA-DOAP06340 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
HLA-DOAP06340 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
HLA-DOAP06340 MAPK10-362ENST00000641864 4484 ntBASIC2.82□□□□□ -1.96
HLA-DOAP06340 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.82□□□□□ -1.96
HLA-DOAP06340 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
HLA-DOAP06340 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
HLA-DOAP06340 AC069528.2-201ENST00000624849 1991 ntBASIC2.82□□□□□ -1.96
HLA-DOAP06340 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.82□□□□□ -1.96
HLA-DOAP06340 RNU1-62P-201ENST00000362599 164 ntBASIC2.82□□□□□ -1.96
HLA-DOAP06340 Y_RNA.217-201ENST00000364214 105 ntBASIC2.82□□□□□ -1.96
HLA-DOAP06340 RNU6-245P-201ENST00000384020 107 ntBASIC2.82□□□□□ -1.96
HLA-DOAP06340 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
HLA-DOAP06340 RNU6ATAC15P-201ENST00000408279 121 ntBASIC2.82□□□□□ -1.96
HLA-DOAP06340 RN7SKP123-201ENST00000410732 291 ntBASIC2.82□□□□□ -1.96
HLA-DOAP06340 AC007064.1-201ENST00000412238 351 ntBASIC2.82□□□□□ -1.96
HLA-DOAP06340 AL390729.2-201ENST00000416137 156 ntBASIC2.82□□□□□ -1.96
HLA-DOAP06340 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC2.82□□□□□ -1.96
HLA-DOAP06340 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.82□□□□□ -1.96
HLA-DOAP06340 Y_RNA.641-201ENST00000459414 105 ntBASIC2.82□□□□□ -1.96
HLA-DOAP06340 RNA5SP281-201ENST00000516504 135 ntBASIC2.82□□□□□ -1.96
HLA-DOAP06340 RN7SKP40-201ENST00000517211 242 ntBASIC2.82□□□□□ -1.96
HLA-DOAP06340 HSPE1P18-201ENST00000517602 280 ntBASIC2.82□□□□□ -1.96
HLA-DOAP06340 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.82□□□□□ -1.96
HLA-DOAP06340 EIF4A1P12-201ENST00000551910 141 ntBASIC2.82□□□□□ -1.96
HLA-DOAP06340 AL137100.2-201ENST00000555786 315 ntBASIC2.82□□□□□ -1.96
HLA-DOAP06340 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.82□□□□□ -1.96
HLA-DOAP06340 RPL30P11-203ENST00000598995 310 ntBASIC2.82□□□□□ -1.96
HLA-DOAP06340 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.82□□□□□ -1.96
HLA-DOAP06340 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.82□□□□□ -1.96
HLA-DOAP06340 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC2.82□□□□□ -1.96
HLA-DOAP06340 snoU18.1-201ENST00000629629 71 ntBASIC2.82□□□□□ -1.96
HLA-DOAP06340 MIR3674-201ENST00000636576 68 ntBASIC2.82□□□□□ -1.96
HLA-DOAP06340 MIR7515-201ENST00000637837 67 ntBASIC2.82□□□□□ -1.96
HLA-DOAP06340 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
HLA-DOAP06340 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
HLA-DOAP06340 RNU6-545P-201ENST00000362681 104 ntBASIC2.81□□□□□ -1.96
HLA-DOAP06340 Y_RNA.82-201ENST00000363000 102 ntBASIC2.81□□□□□ -1.96
HLA-DOAP06340 Y_RNA.92-201ENST00000363043 102 ntBASIC2.81□□□□□ -1.96
HLA-DOAP06340 Y_RNA.235-201ENST00000364412 102 ntBASIC2.81□□□□□ -1.96
HLA-DOAP06340 RNU1-91P-201ENST00000364746 163 ntBASIC2.81□□□□□ -1.96
HLA-DOAP06340 Y_RNA.306-201ENST00000365015 102 ntBASIC2.81□□□□□ -1.96
HLA-DOAP06340 Y_RNA.308-201ENST00000365043 101 ntBASIC2.81□□□□□ -1.96
HLA-DOAP06340 Y_RNA.312-201ENST00000365089 102 ntBASIC2.81□□□□□ -1.96
HLA-DOAP06340 Y_RNA.322-201ENST00000365151 102 ntBASIC2.81□□□□□ -1.96
HLA-DOAP06340 Y_RNA.329-201ENST00000365209 107 ntBASIC2.81□□□□□ -1.96
HLA-DOAP06340 RNU6-1027P-201ENST00000383998 107 ntBASIC2.81□□□□□ -1.96
HLA-DOAP06340 MIR218-1-201ENST00000384999 110 ntBASIC2.81□□□□□ -1.96
HLA-DOAP06340 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
HLA-DOAP06340 RNU6-918P-201ENST00000391219 106 ntBASIC2.81□□□□□ -1.96
HLA-DOAP06340 RNU2-54P-201ENST00000410299 190 ntBASIC2.81□□□□□ -1.96
HLA-DOAP06340 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.81□□□□□ -1.96
HLA-DOAP06340 SNORD2.1-201ENST00000458762 69 ntBASIC2.81□□□□□ -1.96
HLA-DOAP06340 Y_RNA.650-201ENST00000459002 102 ntBASIC2.81□□□□□ -1.96
HLA-DOAP06340 Y_RNA.777-201ENST00000516982 102 ntBASIC2.81□□□□□ -1.96
HLA-DOAP06340 CARD18-203ENST00000532895 422 ntTSL 2 BASIC2.81□□□□□ -1.96
HLA-DOAP06340 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.81□□□□□ -1.96
HLA-DOAP06340 MIR4308-201ENST00000580634 81 ntBASIC2.81□□□□□ -1.96
HLA-DOAP06340 MIR5006-201ENST00000583027 110 ntBASIC2.81□□□□□ -1.96
HLA-DOAP06340 MIR3133-201ENST00000583157 78 ntBASIC2.81□□□□□ -1.96
HLA-DOAP06340 Y_RNA.771-201ENST00000598668 102 ntBASIC2.81□□□□□ -1.96
HLA-DOAP06340 SNRPGP20-201ENST00000604477 205 ntBASIC2.81□□□□□ -1.96
HLA-DOAP06340 AC005562.2-201ENST00000618264 111 ntBASIC2.81□□□□□ -1.96
HLA-DOAP06340 Y_RNA.789-201ENST00000622480 102 ntBASIC2.81□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 162.1 ms