Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.13□□□□□ -1.91
CHGBP05060 RNA5SP320-201ENST00000516263 124 ntBASIC3.13□□□□□ -1.91
CHGBP05060 RNA5SP282-201ENST00000516355 108 ntBASIC3.13□□□□□ -1.91
CHGBP05060 SNORA31.26-201ENST00000517250 137 ntBASIC3.13□□□□□ -1.91
CHGBP05060 AP005660.1-201ENST00000522972 293 ntBASIC3.13□□□□□ -1.91
CHGBP05060 EIF4A1P12-201ENST00000551910 141 ntBASIC3.13□□□□□ -1.91
CHGBP05060 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.13□□□□□ -1.91
CHGBP05060 MIR3162-201ENST00000581818 82 ntBASIC3.13□□□□□ -1.91
CHGBP05060 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC3.13□□□□□ -1.91
CHGBP05060 AL008718.3-201ENST00000610217 321 ntBASIC3.13□□□□□ -1.91
CHGBP05060 AC005520.5-201ENST00000613926 164 ntBASIC3.13□□□□□ -1.91
CHGBP05060 MIR6733-201ENST00000635723 61 ntBASIC3.13□□□□□ -1.91
CHGBP05060 U6.106-201ENST00000636360 105 ntBASIC3.13□□□□□ -1.91
CHGBP05060 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CHGBP05060 MIR449A-201ENST00000362113 91 ntBASIC3.12□□□□□ -1.91
CHGBP05060 RNU6-1272P-201ENST00000362776 107 ntBASIC3.12□□□□□ -1.91
CHGBP05060 RNU6-655P-201ENST00000362858 107 ntBASIC3.12□□□□□ -1.91
CHGBP05060 U3.9-201ENST00000363823 204 ntBASIC3.12□□□□□ -1.91
CHGBP05060 Y_RNA.398-201ENST00000383952 99 ntBASIC3.12□□□□□ -1.91
CHGBP05060 SNORD21-201ENST00000383953 95 ntBASIC3.12□□□□□ -1.91
CHGBP05060 MIR767-201ENST00000390228 109 ntBASIC3.12□□□□□ -1.91
CHGBP05060 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
CHGBP05060 AL357139.1-201ENST00000407792 426 ntBASIC3.12□□□□□ -1.91
CHGBP05060 U3.40-201ENST00000408706 208 ntBASIC3.12□□□□□ -1.91
CHGBP05060 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC3.12□□□□□ -1.91
CHGBP05060 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CHGBP05060 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC3.12□□□□□ -1.91
CHGBP05060 RNA5SP148-201ENST00000516527 94 ntBASIC3.12□□□□□ -1.91
CHGBP05060 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC3.12□□□□□ -1.91
CHGBP05060 MIR3144-201ENST00000579460 79 ntBASIC3.12□□□□□ -1.91
CHGBP05060 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CHGBP05060 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC3.12□□□□□ -1.91
CHGBP05060 AL359854.1-201ENST00000614203 1594 ntBASIC3.12□□□□□ -1.91
CHGBP05060 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.11□□□□□ -1.91
CHGBP05060 RNA5SP68-201ENST00000363885 119 ntBASIC3.11□□□□□ -1.91
CHGBP05060 RNU6-454P-201ENST00000364292 107 ntBASIC3.11□□□□□ -1.91
CHGBP05060 Y_RNA.240-201ENST00000364469 95 ntBASIC3.11□□□□□ -1.91
CHGBP05060 Y_RNA.304-201ENST00000365011 112 ntBASIC3.11□□□□□ -1.91
CHGBP05060 MIR518C-201ENST00000384822 101 ntBASIC3.11□□□□□ -1.91
CHGBP05060 MIR196B-201ENST00000384852 84 ntBASIC3.11□□□□□ -1.91
CHGBP05060 RNA5SP201-201ENST00000410316 124 ntBASIC3.11□□□□□ -1.91
CHGBP05060 Z98742.2-201ENST00000431564 187 ntBASIC3.11□□□□□ -1.91
CHGBP05060 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC3.11□□□□□ -1.91
CHGBP05060 RPL23AP94-201ENST00000512518 302 ntBASIC3.11□□□□□ -1.91
CHGBP05060 RNU2-44P-201ENST00000516795 194 ntBASIC3.11□□□□□ -1.91
CHGBP05060 RNU6-56P-201ENST00000516986 93 ntBASIC3.11□□□□□ -1.91
CHGBP05060 AC025281.1-201ENST00000567026 265 ntBASIC3.11□□□□□ -1.91
CHGBP05060 SNORD11B-201ENST00000607707 90 ntBASIC3.11□□□□□ -1.91
CHGBP05060 RNU6-91P-201ENST00000607774 107 ntBASIC3.11□□□□□ -1.91
CHGBP05060 MIR6817-201ENST00000615588 66 ntBASIC3.11□□□□□ -1.91
CHGBP05060 UCA1.1-201ENST00000620952 75 ntBASIC3.11□□□□□ -1.91
CHGBP05060 AC132825.6-201ENST00000638861 357 ntBASIC3.11□□□□□ -1.91
CHGBP05060 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CHGBP05060 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
CHGBP05060 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.11□□□□□ -1.91
CHGBP05060 AC138915.1-201ENST00000565427 1685 ntBASIC3.11□□□□□ -1.91
CHGBP05060 SNORA26.7-201ENST00000391288 122 ntBASIC3.1□□□□□ -1.91
CHGBP05060 RNU2-2P-201ENST00000410396 191 ntBASIC3.1□□□□□ -1.91
CHGBP05060 AC104332.2-201ENST00000429959 156 ntBASIC3.1□□□□□ -1.91
CHGBP05060 TMSB4XP3-201ENST00000445144 114 ntBASIC3.1□□□□□ -1.91
CHGBP05060 RNU6-436P-201ENST00000516171 114 ntBASIC3.1□□□□□ -1.91
CHGBP05060 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC3.1□□□□□ -1.91
CHGBP05060 CARD18-203ENST00000532895 422 ntTSL 2 BASIC3.1□□□□□ -1.91
CHGBP05060 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC3.1□□□□□ -1.91
CHGBP05060 AL391813.1-201ENST00000603098 260 ntBASIC3.1□□□□□ -1.91
CHGBP05060 RNU2-4P-201ENST00000606190 192 ntBASIC3.1□□□□□ -1.91
CHGBP05060 U2.15-201ENST00000611544 191 ntBASIC3.1□□□□□ -1.91
CHGBP05060 U2.16-201ENST00000613119 191 ntBASIC3.1□□□□□ -1.91
CHGBP05060 U2.12-201ENST00000613778 191 ntBASIC3.1□□□□□ -1.91
CHGBP05060 TCL6_2.1-201ENST00000615162 119 ntBASIC3.1□□□□□ -1.91
CHGBP05060 U2.9-201ENST00000615427 191 ntBASIC3.1□□□□□ -1.91
CHGBP05060 U2.11-201ENST00000616345 191 ntBASIC3.1□□□□□ -1.91
CHGBP05060 U2.2-201ENST00000616535 191 ntBASIC3.1□□□□□ -1.91
CHGBP05060 U2.3-201ENST00000617785 191 ntBASIC3.1□□□□□ -1.91
CHGBP05060 U2.19-201ENST00000618602 191 ntBASIC3.1□□□□□ -1.91
CHGBP05060 RNU2-1-201ENST00000618664 191 ntBASIC3.1□□□□□ -1.91
CHGBP05060 U2.6-201ENST00000619225 191 ntBASIC3.1□□□□□ -1.91
CHGBP05060 U2.5-201ENST00000619465 191 ntBASIC3.1□□□□□ -1.91
CHGBP05060 U2.10-201ENST00000620268 191 ntBASIC3.1□□□□□ -1.91
CHGBP05060 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC3.1□□□□□ -1.91
CHGBP05060 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC3.09□□□□□ -1.91
CHGBP05060 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.09□□□□□ -1.91
CHGBP05060 RNU6-1210P-201ENST00000363775 107 ntBASIC3.09□□□□□ -1.91
CHGBP05060 RNA5SP240-201ENST00000365355 128 ntBASIC3.09□□□□□ -1.91
CHGBP05060 RNU6-1264P-201ENST00000383891 107 ntBASIC3.09□□□□□ -1.91
CHGBP05060 RNU1-57P-201ENST00000384491 166 ntBASIC3.09□□□□□ -1.91
CHGBP05060 RNU6-763P-201ENST00000390865 106 ntBASIC3.09□□□□□ -1.91
CHGBP05060 U8.19-201ENST00000459095 133 ntBASIC3.09□□□□□ -1.91
CHGBP05060 RNU7-200P-201ENST00000516105 62 ntBASIC3.09□□□□□ -1.91
CHGBP05060 AC109329.2-201ENST00000519658 482 ntBASIC3.09□□□□□ -1.91
CHGBP05060 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC3.09□□□□□ -1.91
CHGBP05060 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC3.09□□□□□ -1.91
CHGBP05060 AC004832.4-201ENST00000608952 331 ntBASIC3.09□□□□□ -1.91
CHGBP05060 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.09□□□□□ -1.92
CHGBP05060 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.09□□□□□ -1.92
CHGBP05060 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
CHGBP05060 RNU6-653P-201ENST00000363074 106 ntBASIC3.08□□□□□ -1.92
CHGBP05060 SNORD88.1-201ENST00000408684 91 ntBASIC3.08□□□□□ -1.92
CHGBP05060 RNU6-1135P-201ENST00000411083 103 ntBASIC3.08□□□□□ -1.92
CHGBP05060 RPL39P40-201ENST00000445481 146 ntBASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 110.6 ms