Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 MIR1185-2-201ENST00000408687 86 ntBASIC1.03□□□□□ -2.24
HLA-DPB1P04440 RNU6-373P-201ENST00000411247 98 ntBASIC1.03□□□□□ -2.24
HLA-DPB1P04440 USP9YP30-201ENST00000430729 455 ntBASIC1.03□□□□□ -2.24
HLA-DPB1P04440 AP000870.1-201ENST00000472927 406 ntBASIC1.03□□□□□ -2.24
HLA-DPB1P04440 AC093852.1-201ENST00000503587 266 ntBASIC1.03□□□□□ -2.24
HLA-DPB1P04440 RNU7-128P-201ENST00000517247 62 ntBASIC1.03□□□□□ -2.24
HLA-DPB1P04440 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC1.03□□□□□ -2.24
HLA-DPB1P04440 AC005668.1-201ENST00000571142 476 ntBASIC1.03□□□□□ -2.24
HLA-DPB1P04440 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC1.03□□□□□ -2.24
HLA-DPB1P04440 MIR3937-201ENST00000580135 106 ntBASIC1.03□□□□□ -2.24
HLA-DPB1P04440 AC073413.2-201ENST00000604332 360 ntBASIC1.03□□□□□ -2.24
HLA-DPB1P04440 PRR13P7-201ENST00000605538 430 ntBASIC1.03□□□□□ -2.24
HLA-DPB1P04440 AL365434.2-201ENST00000607979 234 ntBASIC1.03□□□□□ -2.24
HLA-DPB1P04440 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC1.03□□□□□ -2.24
HLA-DPB1P04440 Y_RNA.48-201ENST00000362710 103 ntBASIC1.02□□□□□ -2.25
HLA-DPB1P04440 Y_RNA.405-201ENST00000383979 100 ntBASIC1.02□□□□□ -2.25
HLA-DPB1P04440 Y_RNA.451-201ENST00000384200 100 ntBASIC1.02□□□□□ -2.25
HLA-DPB1P04440 RNU6-842P-201ENST00000384269 107 ntBASIC1.02□□□□□ -2.25
HLA-DPB1P04440 Y_RNA.524-201ENST00000384564 100 ntBASIC1.02□□□□□ -2.25
HLA-DPB1P04440 Y_RNA.561-201ENST00000384694 100 ntBASIC1.02□□□□□ -2.25
HLA-DPB1P04440 SNORD116-4-201ENST00000384733 96 ntBASIC1.02□□□□□ -2.25
HLA-DPB1P04440 MIR515-2-201ENST00000384883 83 ntBASIC1.02□□□□□ -2.25
HLA-DPB1P04440 MIR515-1-201ENST00000384884 83 ntBASIC1.02□□□□□ -2.25
HLA-DPB1P04440 MIR10B-201ENST00000385011 110 ntBASIC1.02□□□□□ -2.25
HLA-DPB1P04440 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.02□□□□□ -2.25
HLA-DPB1P04440 SNORA12.1-201ENST00000390873 148 ntBASIC1.02□□□□□ -2.25
HLA-DPB1P04440 RNA5SP323-201ENST00000391094 133 ntBASIC1.02□□□□□ -2.25
HLA-DPB1P04440 SNORD115-47-201ENST00000391226 86 ntBASIC1.02□□□□□ -2.25
HLA-DPB1P04440 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.02□□□□□ -2.25
HLA-DPB1P04440 AC008134.1-201ENST00000420943 193 ntBASIC1.02□□□□□ -2.25
HLA-DPB1P04440 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.02□□□□□ -2.25
HLA-DPB1P04440 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC1.02□□□□□ -2.25
HLA-DPB1P04440 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.02□□□□□ -2.25
HLA-DPB1P04440 AC024995.1-201ENST00000523014 93 ntBASIC1.02□□□□□ -2.25
HLA-DPB1P04440 MTND5P35-201ENST00000557537 1720 ntBASIC1.02□□□□□ -2.25
HLA-DPB1P04440 MZT1P2-201ENST00000604387 248 ntBASIC1.02□□□□□ -2.25
HLA-DPB1P04440 snoU13.31-201ENST00000607291 104 ntBASIC1.02□□□□□ -2.25
HLA-DPB1P04440 AC021506.2-201ENST00000612354 169 ntBASIC1.02□□□□□ -2.25
HLA-DPB1P04440 AL121890.5-201ENST00000620848 304 ntBASIC1.02□□□□□ -2.25
HLA-DPB1P04440 MIR3662-201ENST00000637030 95 ntBASIC1.02□□□□□ -2.25
HLA-DPB1P04440 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.02□□□□□ -2.25
HLA-DPB1P04440 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
HLA-DPB1P04440 MIR26B-201ENST00000362251 77 ntBASIC1.01□□□□□ -2.25
HLA-DPB1P04440 RNU6-222P-201ENST00000362438 107 ntBASIC1.01□□□□□ -2.25
HLA-DPB1P04440 U3.8-201ENST00000363675 217 ntBASIC1.01□□□□□ -2.25
HLA-DPB1P04440 RNU4-40P-201ENST00000364351 143 ntBASIC1.01□□□□□ -2.25
HLA-DPB1P04440 Y_RNA.473-201ENST00000384333 102 ntBASIC1.01□□□□□ -2.25
HLA-DPB1P04440 RNU6-541P-201ENST00000384709 110 ntBASIC1.01□□□□□ -2.25
HLA-DPB1P04440 MIR513A1-201ENST00000385138 129 ntBASIC1.01□□□□□ -2.25
HLA-DPB1P04440 AL356776.1-201ENST00000406574 447 ntBASIC1.01□□□□□ -2.25
HLA-DPB1P04440 MIR548F1-201ENST00000408667 84 ntBASIC1.01□□□□□ -2.25
HLA-DPB1P04440 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.01□□□□□ -2.25
HLA-DPB1P04440 MTND1P17-201ENST00000448961 204 ntBASIC1.01□□□□□ -2.25
HLA-DPB1P04440 RPS26P45-201ENST00000471748 340 ntBASIC1.01□□□□□ -2.25
HLA-DPB1P04440 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.01□□□□□ -2.25
HLA-DPB1P04440 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC1.01□□□□□ -2.25
HLA-DPB1P04440 MIR3688-2-201ENST00000636963 87 ntBASIC1.01□□□□□ -2.25
HLA-DPB1P04440 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
HLA-DPB1P04440 Y_RNA.301-201ENST00000364990 103 ntBASIC1□□□□□ -2.25
HLA-DPB1P04440 RNU6-793P-201ENST00000384233 104 ntBASIC1□□□□□ -2.25
HLA-DPB1P04440 RNU6-1186P-201ENST00000410429 97 ntBASIC1□□□□□ -2.25
HLA-DPB1P04440 EIF1P1-201ENST00000421436 341 ntBASIC1□□□□□ -2.25
HLA-DPB1P04440 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1□□□□□ -2.25
HLA-DPB1P04440 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC1□□□□□ -2.25
HLA-DPB1P04440 MTND3P23-201ENST00000431980 347 ntBASIC1□□□□□ -2.25
HLA-DPB1P04440 AL603825.1-201ENST00000438481 80 ntBASIC1□□□□□ -2.25
HLA-DPB1P04440 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1□□□□□ -2.25
HLA-DPB1P04440 AC092989.1-201ENST00000481235 277 ntBASIC1□□□□□ -2.25
HLA-DPB1P04440 AL163540.1-201ENST00000485382 386 ntBASIC1□□□□□ -2.25
HLA-DPB1P04440 RNU6-566P-201ENST00000516790 107 ntBASIC1□□□□□ -2.25
HLA-DPB1P04440 RNU6-1198P-201ENST00000516904 67 ntBASIC1□□□□□ -2.25
HLA-DPB1P04440 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC1□□□□□ -2.25
HLA-DPB1P04440 AC091144.1-201ENST00000519573 138 ntBASIC1□□□□□ -2.25
HLA-DPB1P04440 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1□□□□□ -2.25
HLA-DPB1P04440 AC134698.4-201ENST00000523451 826 ntBASIC1□□□□□ -2.25
HLA-DPB1P04440 CYP3A52P-201ENST00000563326 91 ntBASIC1□□□□□ -2.25
HLA-DPB1P04440 MIR5695-201ENST00000579717 85 ntBASIC1□□□□□ -2.25
HLA-DPB1P04440 MIR4273-201ENST00000582824 84 ntBASIC1□□□□□ -2.25
HLA-DPB1P04440 AL390123.1-201ENST00000603216 237 ntBASIC1□□□□□ -2.25
HLA-DPB1P04440 AL355802.3-201ENST00000607571 545 ntBASIC1□□□□□ -2.25
HLA-DPB1P04440 AL359075.3-201ENST00000613288 217 ntBASIC1□□□□□ -2.25
HLA-DPB1P04440 AC090517.2-201ENST00000614966 680 ntBASIC1□□□□□ -2.25
HLA-DPB1P04440 MIR6128-201ENST00000615528 109 ntBASIC1□□□□□ -2.25
HLA-DPB1P04440 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1□□□□□ -2.25
HLA-DPB1P04440 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1□□□□□ -2.25
HLA-DPB1P04440 Y_RNA.157-201ENST00000363638 102 ntBASIC0.99□□□□□ -2.25
HLA-DPB1P04440 RNU6-137P-201ENST00000363680 108 ntBASIC0.99□□□□□ -2.25
HLA-DPB1P04440 RNU6-595P-201ENST00000363944 107 ntBASIC0.99□□□□□ -2.25
HLA-DPB1P04440 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC0.99□□□□□ -2.25
HLA-DPB1P04440 RNU6-1031P-201ENST00000384773 107 ntBASIC0.99□□□□□ -2.25
HLA-DPB1P04440 NDUFB4P10-201ENST00000452541 359 ntBASIC0.99□□□□□ -2.25
HLA-DPB1P04440 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC0.99□□□□□ -2.25
HLA-DPB1P04440 AC093303.1-201ENST00000514549 295 ntBASIC0.99□□□□□ -2.25
HLA-DPB1P04440 RNU4-49P-201ENST00000516080 140 ntBASIC0.99□□□□□ -2.25
HLA-DPB1P04440 RNU1-142P-201ENST00000516682 145 ntBASIC0.99□□□□□ -2.25
HLA-DPB1P04440 AL590705.4-201ENST00000532209 134 ntBASIC0.99□□□□□ -2.25
HLA-DPB1P04440 CBX3P8-201ENST00000532412 525 ntBASIC0.99□□□□□ -2.25
HLA-DPB1P04440 MIR6078-201ENST00000611069 100 ntBASIC0.99□□□□□ -2.25
HLA-DPB1P04440 CENPF-206ENST00000614578 528 ntTSL 5 BASIC0.99□□□□□ -2.25
HLA-DPB1P04440 AL133216.2-202ENST00000634512 349 ntBASIC0.99□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 130.8 ms