Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 U4.7-201ENST00000638126 106 ntBASIC2.09□□□□□ -2.07
COL2A1P02458 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.09□□□□□ -2.08
COL2A1P02458 RNA5SP138-201ENST00000365098 114 ntBASIC2.08□□□□□ -2.08
COL2A1P02458 Y_RNA.418-201ENST00000384029 102 ntBASIC2.08□□□□□ -2.08
COL2A1P02458 RNU6-658P-201ENST00000384606 106 ntBASIC2.08□□□□□ -2.08
COL2A1P02458 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC2.08□□□□□ -2.08
COL2A1P02458 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.08□□□□□ -2.08
COL2A1P02458 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC2.08□□□□□ -2.08
COL2A1P02458 AC104332.1-201ENST00000440471 797 ntBASIC2.08□□□□□ -2.08
COL2A1P02458 snoU13.4-201ENST00000458916 104 ntBASIC2.08□□□□□ -2.08
COL2A1P02458 RPL21P104-201ENST00000464143 478 ntBASIC2.08□□□□□ -2.08
COL2A1P02458 AP000870.1-201ENST00000472927 406 ntBASIC2.08□□□□□ -2.08
COL2A1P02458 RPS29P20-201ENST00000489592 171 ntBASIC2.08□□□□□ -2.08
COL2A1P02458 HMGB1P22-201ENST00000505315 124 ntBASIC2.08□□□□□ -2.08
COL2A1P02458 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC2.08□□□□□ -2.08
COL2A1P02458 RNU6-496P-201ENST00000516145 99 ntBASIC2.08□□□□□ -2.08
COL2A1P02458 RNU4-71P-201ENST00000516258 113 ntBASIC2.08□□□□□ -2.08
COL2A1P02458 RNU6-56P-201ENST00000516986 93 ntBASIC2.08□□□□□ -2.08
COL2A1P02458 RNU6-1073P-201ENST00000517182 106 ntBASIC2.08□□□□□ -2.08
COL2A1P02458 RPL21P9-201ENST00000556149 474 ntBASIC2.08□□□□□ -2.08
COL2A1P02458 RPL23AP88-201ENST00000605759 454 ntBASIC2.08□□□□□ -2.08
COL2A1P02458 AP002826.1-201ENST00000608835 315 ntBASIC2.08□□□□□ -2.08
COL2A1P02458 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
COL2A1P02458 SNORD56.1-201ENST00000362913 68 ntBASIC2.07□□□□□ -2.08
COL2A1P02458 RNU6-626P-201ENST00000363354 107 ntBASIC2.07□□□□□ -2.08
COL2A1P02458 Z98749.2-208ENST00000381646 500 ntBASIC2.07□□□□□ -2.08
COL2A1P02458 SNORA36A-201ENST00000384221 132 ntBASIC2.07□□□□□ -2.08
COL2A1P02458 RNU6-72P-201ENST00000384285 79 ntBASIC2.07□□□□□ -2.08
COL2A1P02458 RNY3P4-201ENST00000384428 101 ntBASIC2.07□□□□□ -2.08
COL2A1P02458 RNU6-541P-201ENST00000384709 110 ntBASIC2.07□□□□□ -2.08
COL2A1P02458 MIR613-201ENST00000385248 95 ntBASIC2.07□□□□□ -2.08
COL2A1P02458 MIR493-201ENST00000385254 89 ntBASIC2.07□□□□□ -2.08
COL2A1P02458 AL033519.2-201ENST00000403958 392 ntBASIC2.07□□□□□ -2.08
COL2A1P02458 MRPL35P1-201ENST00000404272 572 ntBASIC2.07□□□□□ -2.08
COL2A1P02458 Y_RNA.626-201ENST00000411288 95 ntBASIC2.07□□□□□ -2.08
COL2A1P02458 AC004965.1-201ENST00000413033 213 ntBASIC2.07□□□□□ -2.08
COL2A1P02458 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC2.07□□□□□ -2.08
COL2A1P02458 AC080013.2-201ENST00000460866 323 ntBASIC2.07□□□□□ -2.08
COL2A1P02458 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC2.07□□□□□ -2.08
COL2A1P02458 SNORA31.8-201ENST00000516327 108 ntBASIC2.07□□□□□ -2.08
COL2A1P02458 SCARNA15.2-201ENST00000516409 127 ntBASIC2.07□□□□□ -2.08
COL2A1P02458 CBX3P4-201ENST00000538909 354 ntBASIC2.07□□□□□ -2.08
COL2A1P02458 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC2.07□□□□□ -2.08
COL2A1P02458 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC2.07□□□□□ -2.08
COL2A1P02458 AC104581.2-201ENST00000572227 430 ntBASIC2.07□□□□□ -2.08
COL2A1P02458 AC090617.3-201ENST00000573670 475 ntBASIC2.07□□□□□ -2.08
COL2A1P02458 AC005828.6-201ENST00000606610 232 ntBASIC2.07□□□□□ -2.08
COL2A1P02458 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.07□□□□□ -2.08
COL2A1P02458 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC2.07□□□□□ -2.08
COL2A1P02458 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC2.07□□□□□ -2.08
COL2A1P02458 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
COL2A1P02458 SNORD114-26-201ENST00000363543 72 ntBASIC2.07□□□□□ -2.08
COL2A1P02458 RNU6-682P-201ENST00000363843 106 ntBASIC2.07□□□□□ -2.08
COL2A1P02458 RNU6-961P-201ENST00000363893 105 ntBASIC2.07□□□□□ -2.08
COL2A1P02458 Y_RNA.191-201ENST00000363972 113 ntBASIC2.07□□□□□ -2.08
COL2A1P02458 SNORA7.2-201ENST00000364446 145 ntBASIC2.07□□□□□ -2.08
COL2A1P02458 Y_RNA.292-201ENST00000364904 97 ntBASIC2.07□□□□□ -2.08
COL2A1P02458 RNU6-968P-201ENST00000384076 107 ntBASIC2.07□□□□□ -2.08
COL2A1P02458 RNU6-746P-201ENST00000384112 109 ntBASIC2.07□□□□□ -2.08
COL2A1P02458 RNU6-140P-201ENST00000384566 108 ntBASIC2.07□□□□□ -2.08
COL2A1P02458 Y_RNA.581-201ENST00000391017 97 ntBASIC2.07□□□□□ -2.08
COL2A1P02458 SNORD12B-201ENST00000410433 91 ntBASIC2.07□□□□□ -2.08
COL2A1P02458 AL356867.1-201ENST00000429623 299 ntBASIC2.07□□□□□ -2.08
COL2A1P02458 AC243964.1-201ENST00000441814 261 ntBASIC2.07□□□□□ -2.08
COL2A1P02458 AC013470.1-201ENST00000453438 462 ntBASIC2.07□□□□□ -2.08
COL2A1P02458 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC2.07□□□□□ -2.08
COL2A1P02458 snoU13.6-201ENST00000458785 104 ntBASIC2.07□□□□□ -2.08
COL2A1P02458 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC2.07□□□□□ -2.08
COL2A1P02458 RNU6-1278P-201ENST00000516130 107 ntBASIC2.07□□□□□ -2.08
COL2A1P02458 RNU6-581P-201ENST00000516214 105 ntBASIC2.07□□□□□ -2.08
COL2A1P02458 SNORA43.2-201ENST00000516652 128 ntBASIC2.07□□□□□ -2.08
COL2A1P02458 RNU7-110P-201ENST00000516891 62 ntBASIC2.07□□□□□ -2.08
COL2A1P02458 AC109479.2-201ENST00000517842 174 ntBASIC2.07□□□□□ -2.08
COL2A1P02458 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.07□□□□□ -2.08
COL2A1P02458 AC010186.2-204ENST00000537668 439 ntBASIC2.07□□□□□ -2.08
COL2A1P02458 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.07□□□□□ -2.08
COL2A1P02458 MIR4782-201ENST00000577987 79 ntBASIC2.07□□□□□ -2.08
COL2A1P02458 MIR5695-201ENST00000579717 85 ntBASIC2.07□□□□□ -2.08
COL2A1P02458 AC005296.1-201ENST00000616145 209 ntBASIC2.07□□□□□ -2.08
COL2A1P02458 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC2.07□□□□□ -2.08
COL2A1P02458 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC2.06□□□□□ -2.08
COL2A1P02458 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC2.06□□□□□ -2.08
COL2A1P02458 Z82209.1-201ENST00000422141 2135 ntBASIC2.06□□□□□ -2.08
COL2A1P02458 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
COL2A1P02458 MIR411-201ENST00000362239 96 ntBASIC2.06□□□□□ -2.08
COL2A1P02458 Y_RNA.44-201ENST00000362676 108 ntBASIC2.06□□□□□ -2.08
COL2A1P02458 RNU6-105P-201ENST00000363909 104 ntBASIC2.06□□□□□ -2.08
COL2A1P02458 SNORA16.1-201ENST00000364597 132 ntBASIC2.06□□□□□ -2.08
COL2A1P02458 Y_RNA.504-201ENST00000384481 104 ntBASIC2.06□□□□□ -2.08
COL2A1P02458 SNORD116-20-201ENST00000384529 92 ntBASIC2.06□□□□□ -2.08
COL2A1P02458 Y_RNA.518-201ENST00000384552 113 ntBASIC2.06□□□□□ -2.08
COL2A1P02458 MIR544A-201ENST00000384855 91 ntBASIC2.06□□□□□ -2.08
COL2A1P02458 SNORD78.2-201ENST00000391076 69 ntBASIC2.06□□□□□ -2.08
COL2A1P02458 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
COL2A1P02458 MTCO1P5-201ENST00000433573 344 ntBASIC2.06□□□□□ -2.08
COL2A1P02458 SNRPEP9-201ENST00000436794 238 ntBASIC2.06□□□□□ -2.08
COL2A1P02458 Z82210.1-201ENST00000440037 231 ntBASIC2.06□□□□□ -2.08
COL2A1P02458 AF186996.7-201ENST00000492781 209 ntBASIC2.06□□□□□ -2.08
COL2A1P02458 Y_RNA.679-201ENST00000516416 91 ntBASIC2.06□□□□□ -2.08
COL2A1P02458 Y_RNA.683-201ENST00000516508 93 ntBASIC2.06□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 126.8 ms