Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 RNU6-1041P-201ENST00000516254 102 ntBASIC1.96□□□□□ -2.1
NKX2-2O95096 RNU6-1146P-201ENST00000516282 102 ntBASIC1.96□□□□□ -2.1
NKX2-2O95096 RNVU1-2-201ENST00000516326 135 ntBASIC1.96□□□□□ -2.1
NKX2-2O95096 MIR1273D-201ENST00000577266 86 ntBASIC1.96□□□□□ -2.1
NKX2-2O95096 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.96□□□□□ -2.1
NKX2-2O95096 MIR6873-201ENST00000622788 63 ntBASIC1.96□□□□□ -2.1
NKX2-2O95096 MIR338-201ENST00000636369 67 ntBASIC1.96□□□□□ -2.1
NKX2-2O95096 U6.92-201ENST00000636464 89 ntBASIC1.96□□□□□ -2.1
NKX2-2O95096 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.96□□□□□ -2.1
NKX2-2O95096 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
NKX2-2O95096 ZNF72P-201ENST00000425869 1908 ntBASIC1.95□□□□□ -2.1
NKX2-2O95096 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC1.95□□□□□ -2.1
NKX2-2O95096 Y_RNA.28-201ENST00000362554 111 ntBASIC1.95□□□□□ -2.1
NKX2-2O95096 SNORA8-201ENST00000384574 139 ntBASIC1.95□□□□□ -2.1
NKX2-2O95096 RNU6-308P-201ENST00000390957 107 ntBASIC1.95□□□□□ -2.1
NKX2-2O95096 MIR1302-11-201ENST00000408051 138 ntBASIC1.95□□□□□ -2.1
NKX2-2O95096 MIR1302-9-201ENST00000408365 138 ntBASIC1.95□□□□□ -2.1
NKX2-2O95096 MIR1302-10-201ENST00000408734 138 ntBASIC1.95□□□□□ -2.1
NKX2-2O95096 AL354751.2-201ENST00000415471 210 ntBASIC1.95□□□□□ -2.1
NKX2-2O95096 CST2P1-201ENST00000425770 87 ntBASIC1.95□□□□□ -2.1
NKX2-2O95096 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC1.95□□□□□ -2.1
NKX2-2O95096 AC010469.2-201ENST00000496412 480 ntBASIC1.95□□□□□ -2.1
NKX2-2O95096 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.95□□□□□ -2.1
NKX2-2O95096 YWHAEP4-201ENST00000505390 198 ntBASIC1.95□□□□□ -2.1
NKX2-2O95096 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.95□□□□□ -2.1
NKX2-2O95096 AC008413.1-201ENST00000511864 177 ntBASIC1.95□□□□□ -2.1
NKX2-2O95096 AP002001.1-203ENST00000534002 267 ntBASIC1.95□□□□□ -2.1
NKX2-2O95096 MIR3684-201ENST00000579779 74 ntBASIC1.95□□□□□ -2.1
NKX2-2O95096 MIR1302-2-201ENST00000607096 138 ntBASIC1.95□□□□□ -2.1
NKX2-2O95096 MIR3674-201ENST00000636576 68 ntBASIC1.95□□□□□ -2.1
NKX2-2O95096 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
NKX2-2O95096 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
NKX2-2O95096 RNA5SP276-201ENST00000362580 94 ntBASIC1.94□□□□□ -2.1
NKX2-2O95096 RNU6-862P-201ENST00000362804 105 ntBASIC1.94□□□□□ -2.1
NKX2-2O95096 Y_RNA.148-201ENST00000363557 117 ntBASIC1.94□□□□□ -2.1
NKX2-2O95096 Y_RNA.526-201ENST00000384572 110 ntBASIC1.94□□□□□ -2.1
NKX2-2O95096 MIR548P-201ENST00000408336 84 ntBASIC1.94□□□□□ -2.1
NKX2-2O95096 AL356379.1-201ENST00000414105 126 ntBASIC1.94□□□□□ -2.1
NKX2-2O95096 Z98742.3-201ENST00000418637 326 ntBASIC1.94□□□□□ -2.1
NKX2-2O95096 Y_RNA.701-201ENST00000516812 110 ntBASIC1.94□□□□□ -2.1
NKX2-2O95096 Y_RNA.711-201ENST00000516993 102 ntBASIC1.94□□□□□ -2.1
NKX2-2O95096 SUB1P4-201ENST00000566062 339 ntBASIC1.94□□□□□ -2.1
NKX2-2O95096 DLEU2_2.2-201ENST00000615474 90 ntBASIC1.94□□□□□ -2.1
NKX2-2O95096 AC010205.1-201ENST00000616668 449 ntBASIC1.94□□□□□ -2.1
NKX2-2O95096 AC064859.1-201ENST00000624741 174 ntBASIC1.94□□□□□ -2.1
NKX2-2O95096 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
NKX2-2O95096 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC1.93□□□□□ -2.1
NKX2-2O95096 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
NKX2-2O95096 AC005592.1-201ENST00000566527 1640 ntBASIC1.93□□□□□ -2.1
NKX2-2O95096 RNU6-1266P-201ENST00000362794 105 ntBASIC1.93□□□□□ -2.1
NKX2-2O95096 Y_RNA.80-201ENST00000362996 102 ntBASIC1.93□□□□□ -2.1
NKX2-2O95096 RNU6-961P-201ENST00000363893 105 ntBASIC1.93□□□□□ -2.1
NKX2-2O95096 RNA5SP37-201ENST00000365420 130 ntBASIC1.93□□□□□ -2.1
NKX2-2O95096 RNU6-926P-201ENST00000384075 107 ntBASIC1.93□□□□□ -2.1
NKX2-2O95096 RNU6-1310P-201ENST00000384153 107 ntBASIC1.93□□□□□ -2.1
NKX2-2O95096 Y_RNA.485-201ENST00000384395 102 ntBASIC1.93□□□□□ -2.1
NKX2-2O95096 SNORA3.2-201ENST00000408221 125 ntBASIC1.93□□□□□ -2.1
NKX2-2O95096 RNA5SP425-201ENST00000410336 112 ntBASIC1.93□□□□□ -2.1
NKX2-2O95096 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC1.93□□□□□ -2.1
NKX2-2O95096 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC1.93□□□□□ -2.1
NKX2-2O95096 RNU6-408P-201ENST00000515910 100 ntBASIC1.93□□□□□ -2.1
NKX2-2O95096 SNORA25.10-201ENST00000515926 124 ntBASIC1.93□□□□□ -2.1
NKX2-2O95096 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC1.93□□□□□ -2.1
NKX2-2O95096 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.93□□□□□ -2.1
NKX2-2O95096 HSBP1P1-201ENST00000555205 166 ntBASIC1.93□□□□□ -2.1
NKX2-2O95096 AC020661.2-201ENST00000560114 134 ntBASIC1.93□□□□□ -2.1
NKX2-2O95096 MIR4659A-201ENST00000580269 81 ntBASIC1.93□□□□□ -2.1
NKX2-2O95096 MIR4435-1-201ENST00000582552 80 ntBASIC1.93□□□□□ -2.1
NKX2-2O95096 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC1.93□□□□□ -2.1
NKX2-2O95096 AC022432.1-201ENST00000595739 310 ntBASIC1.93□□□□□ -2.1
NKX2-2O95096 AC240442.1-201ENST00000616055 283 ntBASIC1.93□□□□□ -2.1
NKX2-2O95096 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.93□□□□□ -2.1
NKX2-2O95096 AL162373.1-201ENST00000620433 407 ntBASIC1.93□□□□□ -2.1
NKX2-2O95096 RNU1-96P-201ENST00000364163 162 ntBASIC1.92□□□□□ -2.1
NKX2-2O95096 Y_RNA.287-201ENST00000364853 94 ntBASIC1.92□□□□□ -2.1
NKX2-2O95096 MIR515-2-201ENST00000384883 83 ntBASIC1.92□□□□□ -2.1
NKX2-2O95096 MIR515-1-201ENST00000384884 83 ntBASIC1.92□□□□□ -2.1
NKX2-2O95096 RNA5SP212-201ENST00000391223 107 ntBASIC1.92□□□□□ -2.1
NKX2-2O95096 MIR1253-201ENST00000408273 105 ntBASIC1.92□□□□□ -2.1
NKX2-2O95096 RN7SKP223-201ENST00000410582 62 ntBASIC1.92□□□□□ -2.1
NKX2-2O95096 RNA5SP508-201ENST00000411327 119 ntBASIC1.92□□□□□ -2.1
NKX2-2O95096 MTCYBP6-201ENST00000441810 138 ntBASIC1.92□□□□□ -2.1
NKX2-2O95096 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.92□□□□□ -2.1
NKX2-2O95096 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC1.92□□□□□ -2.1
NKX2-2O95096 AC025033.1-201ENST00000463883 194 ntBASIC1.92□□□□□ -2.1
NKX2-2O95096 RNU6-988P-201ENST00000519081 107 ntBASIC1.92□□□□□ -2.1
NKX2-2O95096 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.92□□□□□ -2.1
NKX2-2O95096 MIR5094-201ENST00000578766 85 ntBASIC1.92□□□□□ -2.1
NKX2-2O95096 MIR4287-201ENST00000579398 78 ntBASIC1.92□□□□□ -2.1
NKX2-2O95096 RPS29P30-201ENST00000600975 111 ntBASIC1.92□□□□□ -2.1
NKX2-2O95096 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.92□□□□□ -2.1
NKX2-2O95096 AC069114.2-201ENST00000604699 304 ntBASIC1.92□□□□□ -2.1
NKX2-2O95096 AL121655.1-201ENST00000605811 308 ntBASIC1.92□□□□□ -2.1
NKX2-2O95096 AL773524.1-201ENST00000614065 229 ntBASIC1.92□□□□□ -2.1
NKX2-2O95096 SDR42E1P4-201ENST00000620894 481 ntBASIC1.92□□□□□ -2.1
NKX2-2O95096 AC006435.5-201ENST00000624486 112 ntBASIC1.92□□□□□ -2.1
NKX2-2O95096 ZNF658B-202ENST00000615961 3375 ntBASIC1.92□□□□□ -2.1
NKX2-2O95096 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC1.92□□□□□ -2.1
NKX2-2O95096 AC091812.1-201ENST00000432235 1948 ntBASIC1.91□□□□□ -2.1
NKX2-2O95096 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms