Protein–RNA interactions for Protein: O75379

VAMP4, Vesicle-associated membrane protein 4, humanhuman

Predictions only

Length 141 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4O75379 RNU6-861P-201ENST00000516745 106 ntBASIC3.33□□□□□ -1.88
VAMP4O75379 HSPE1P18-201ENST00000517602 280 ntBASIC3.33□□□□□ -1.88
VAMP4O75379 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC3.33□□□□□ -1.88
VAMP4O75379 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
VAMP4O75379 MIR3145-201ENST00000580727 82 ntBASIC3.33□□□□□ -1.88
VAMP4O75379 MIR4672-201ENST00000583126 81 ntBASIC3.33□□□□□ -1.88
VAMP4O75379 MIR4765-201ENST00000585007 77 ntBASIC3.33□□□□□ -1.88
VAMP4O75379 DEFB117-201ENST00000602356 141 ntBASIC3.33□□□□□ -1.88
VAMP4O75379 AC008873.1-201ENST00000625051 138 ntBASIC3.33□□□□□ -1.88
VAMP4O75379 U6.106-201ENST00000636360 105 ntBASIC3.33□□□□□ -1.88
VAMP4O75379 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.32□□□□□ -1.88
VAMP4O75379 Y_RNA.233-201ENST00000364407 101 ntBASIC3.32□□□□□ -1.88
VAMP4O75379 Y_RNA.262-201ENST00000364641 102 ntBASIC3.32□□□□□ -1.88
VAMP4O75379 SNORD87-201ENST00000364849 89 ntBASIC3.32□□□□□ -1.88
VAMP4O75379 Y_RNA.304-201ENST00000365011 112 ntBASIC3.32□□□□□ -1.88
VAMP4O75379 Y_RNA.329-201ENST00000365209 107 ntBASIC3.32□□□□□ -1.88
VAMP4O75379 U8.9-201ENST00000365667 134 ntBASIC3.32□□□□□ -1.88
VAMP4O75379 RNU6-211P-201ENST00000384047 107 ntBASIC3.32□□□□□ -1.88
VAMP4O75379 AC024067.1-201ENST00000426199 223 ntBASIC3.32□□□□□ -1.88
VAMP4O75379 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC3.32□□□□□ -1.88
VAMP4O75379 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC3.32□□□□□ -1.88
VAMP4O75379 RNU6-406P-201ENST00000516470 107 ntBASIC3.32□□□□□ -1.88
VAMP4O75379 SCARNA11.3-201ENST00000517276 130 ntBASIC3.32□□□□□ -1.88
VAMP4O75379 AC103810.1-201ENST00000579873 453 ntBASIC3.32□□□□□ -1.88
VAMP4O75379 RPL30P11-203ENST00000598995 310 ntBASIC3.32□□□□□ -1.88
VAMP4O75379 MIR6733-201ENST00000635723 61 ntBASIC3.32□□□□□ -1.88
VAMP4O75379 Y_RNA.111-201ENST00000363248 100 ntBASIC3.31□□□□□ -1.88
VAMP4O75379 RNA5SP68-201ENST00000363885 119 ntBASIC3.31□□□□□ -1.88
VAMP4O75379 Y_RNA.243-201ENST00000364481 109 ntBASIC3.31□□□□□ -1.88
VAMP4O75379 OOSP1P1-201ENST00000423265 274 ntBASIC3.31□□□□□ -1.88
VAMP4O75379 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.31□□□□□ -1.88
VAMP4O75379 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.31□□□□□ -1.88
VAMP4O75379 SEM1P1-201ENST00000506694 209 ntBASIC3.31□□□□□ -1.88
VAMP4O75379 RNU6-789P-201ENST00000517105 102 ntBASIC3.31□□□□□ -1.88
VAMP4O75379 MIR5692C2-201ENST00000577959 77 ntBASIC3.31□□□□□ -1.88
VAMP4O75379 AC006023.1-201ENST00000603944 259 ntBASIC3.31□□□□□ -1.88
VAMP4O75379 AL365265.1-201ENST00000621045 234 ntBASIC3.31□□□□□ -1.88
VAMP4O75379 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
VAMP4O75379 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
VAMP4O75379 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
VAMP4O75379 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC3.31□□□□□ -1.88
VAMP4O75379 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
VAMP4O75379 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
VAMP4O75379 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
VAMP4O75379 Y_RNA.240-201ENST00000364469 95 ntBASIC3.3□□□□□ -1.88
VAMP4O75379 SNORA40.19-201ENST00000390846 128 ntBASIC3.3□□□□□ -1.88
VAMP4O75379 RNA5SP210-201ENST00000391034 120 ntBASIC3.3□□□□□ -1.88
VAMP4O75379 SNORA12-201ENST00000391162 147 ntBASIC3.3□□□□□ -1.88
VAMP4O75379 RN7SKP123-201ENST00000410732 291 ntBASIC3.3□□□□□ -1.88
VAMP4O75379 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC3.3□□□□□ -1.88
VAMP4O75379 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC3.3□□□□□ -1.88
VAMP4O75379 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
VAMP4O75379 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC3.3□□□□□ -1.88
VAMP4O75379 Y_RNA.662-201ENST00000516028 97 ntBASIC3.3□□□□□ -1.88
VAMP4O75379 RNU1-117P-201ENST00000517041 158 ntBASIC3.3□□□□□ -1.88
VAMP4O75379 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC3.3□□□□□ -1.88
VAMP4O75379 AL670379.2-201ENST00000604983 252 ntBASIC3.3□□□□□ -1.88
VAMP4O75379 AL078604.3-201ENST00000615580 211 ntBASIC3.3□□□□□ -1.88
VAMP4O75379 AL161431.1-201ENST00000618966 4205 ntBASIC3.3□□□□□ -1.88
VAMP4O75379 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
VAMP4O75379 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC3.29□□□□□ -1.88
VAMP4O75379 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC3.29□□□□□ -1.88
VAMP4O75379 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
VAMP4O75379 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
VAMP4O75379 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC3.29□□□□□ -1.88
VAMP4O75379 RNU6-1272P-201ENST00000362776 107 ntBASIC3.29□□□□□ -1.88
VAMP4O75379 RNU6-653P-201ENST00000363074 106 ntBASIC3.29□□□□□ -1.88
VAMP4O75379 RNU6-486P-201ENST00000363116 107 ntBASIC3.29□□□□□ -1.88
VAMP4O75379 SNORD115-30-201ENST00000364117 82 ntBASIC3.29□□□□□ -1.88
VAMP4O75379 MIR586-201ENST00000385035 97 ntBASIC3.29□□□□□ -1.88
VAMP4O75379 RNA5SP492-201ENST00000411330 114 ntBASIC3.29□□□□□ -1.88
VAMP4O75379 AC022559.1-201ENST00000520905 205 ntBASIC3.29□□□□□ -1.88
VAMP4O75379 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC3.29□□□□□ -1.88
VAMP4O75379 AC009127.3-201ENST00000570531 403 ntBASIC3.29□□□□□ -1.88
VAMP4O75379 RPL12P50-201ENST00000603116 116 ntBASIC3.29□□□□□ -1.88
VAMP4O75379 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC3.29□□□□□ -1.88
VAMP4O75379 UCA1.1-201ENST00000620952 75 ntBASIC3.29□□□□□ -1.88
VAMP4O75379 MIR6852-201ENST00000621699 66 ntBASIC3.29□□□□□ -1.88
VAMP4O75379 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC3.28□□□□□ -1.88
VAMP4O75379 AC131280.1-202ENST00000624067 4211 ntBASIC3.28□□□□□ -1.88
VAMP4O75379 RNU6-324P-201ENST00000363957 106 ntBASIC3.28□□□□□ -1.88
VAMP4O75379 Y_RNA.308-201ENST00000365043 101 ntBASIC3.28□□□□□ -1.88
VAMP4O75379 MIR196B-201ENST00000384852 84 ntBASIC3.28□□□□□ -1.88
VAMP4O75379 MIR627-201ENST00000384979 97 ntBASIC3.28□□□□□ -1.88
VAMP4O75379 RNU6-710P-201ENST00000410424 105 ntBASIC3.28□□□□□ -1.88
VAMP4O75379 Y_RNA.637-201ENST00000459424 114 ntBASIC3.28□□□□□ -1.88
VAMP4O75379 SRIP1-201ENST00000489235 288 ntBASIC3.28□□□□□ -1.88
VAMP4O75379 AC140059.1-201ENST00000489238 361 ntBASIC3.28□□□□□ -1.88
VAMP4O75379 KRTAP13-6P-201ENST00000508999 371 ntBASIC3.28□□□□□ -1.88
VAMP4O75379 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.28□□□□□ -1.88
VAMP4O75379 RNA5SP320-201ENST00000516263 124 ntBASIC3.28□□□□□ -1.88
VAMP4O75379 RNY3P16-201ENST00000516338 101 ntBASIC3.28□□□□□ -1.88
VAMP4O75379 RNA5SP148-201ENST00000516527 94 ntBASIC3.28□□□□□ -1.88
VAMP4O75379 RNU6-255P-201ENST00000516957 105 ntBASIC3.28□□□□□ -1.88
VAMP4O75379 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.28□□□□□ -1.88
VAMP4O75379 AC023043.3-201ENST00000593113 385 ntBASIC3.28□□□□□ -1.88
VAMP4O75379 AL008718.3-201ENST00000610217 321 ntBASIC3.28□□□□□ -1.88
VAMP4O75379 SCARNA15.3-201ENST00000626315 122 ntBASIC3.28□□□□□ -1.88
VAMP4O75379 SCARNA4.1-201ENST00000628597 123 ntBASIC3.28□□□□□ -1.88
VAMP4O75379 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms