Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 DBIP2-201ENST00000419076 262 ntBASIC4.31□□□□□ -1.72
RNF40O75150 TRBV25OR9-2-201ENST00000438417 374 ntBASIC4.31□□□□□ -1.72
RNF40O75150 RPL39P39-201ENST00000455840 151 ntBASIC4.31□□□□□ -1.72
RNF40O75150 RNU6-693P-201ENST00000516134 107 ntBASIC4.31□□□□□ -1.72
RNF40O75150 MIR4444-1-201ENST00000581696 74 ntBASIC4.31□□□□□ -1.72
RNF40O75150 MIR4444-2-201ENST00000584390 74 ntBASIC4.31□□□□□ -1.72
RNF40O75150 AC007229.1-201ENST00000590455 412 ntBASIC4.31□□□□□ -1.72
RNF40O75150 HOTTIP_4.1-201ENST00000618195 165 ntBASIC4.31□□□□□ -1.72
RNF40O75150 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
RNF40O75150 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
RNF40O75150 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC4.31□□□□□ -1.72
RNF40O75150 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
RNF40O75150 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
RNF40O75150 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
RNF40O75150 Y_RNA.73-201ENST00000362910 113 ntBASIC4.3□□□□□ -1.72
RNF40O75150 RNY3P2-201ENST00000362918 102 ntBASIC4.3□□□□□ -1.72
RNF40O75150 RNU6-690P-201ENST00000365242 106 ntBASIC4.3□□□□□ -1.72
RNF40O75150 RNU6-1276P-201ENST00000365372 104 ntBASIC4.3□□□□□ -1.72
RNF40O75150 HMGN2P8-201ENST00000391458 268 ntBASIC4.3□□□□□ -1.72
RNF40O75150 MIR1183-201ENST00000408856 89 ntBASIC4.3□□□□□ -1.72
RNF40O75150 SNRPGP13-201ENST00000442212 177 ntBASIC4.3□□□□□ -1.72
RNF40O75150 RPL36AP48-201ENST00000485521 314 ntBASIC4.3□□□□□ -1.72
RNF40O75150 RNU6-1096P-201ENST00000517089 102 ntBASIC4.3□□□□□ -1.72
RNF40O75150 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.3□□□□□ -1.72
RNF40O75150 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.3□□□□□ -1.72
RNF40O75150 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC4.3□□□□□ -1.72
RNF40O75150 AC090115.4-201ENST00000609970 188 ntBASIC4.3□□□□□ -1.72
RNF40O75150 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
RNF40O75150 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
RNF40O75150 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC4.3□□□□□ -1.72
RNF40O75150 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
RNF40O75150 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC4.3□□□□□ -1.72
RNF40O75150 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.3□□□□□ -1.72
RNF40O75150 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
RNF40O75150 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
RNF40O75150 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
RNF40O75150 AC058791.1-201ENST00000608412 3198 ntBASIC4.29□□□□□ -1.72
RNF40O75150 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
RNF40O75150 RNU6-418P-201ENST00000384035 107 ntBASIC4.29□□□□□ -1.72
RNF40O75150 RNU6-675P-201ENST00000384236 104 ntBASIC4.29□□□□□ -1.72
RNF40O75150 PTMAP2-201ENST00000397627 327 ntBASIC4.29□□□□□ -1.72
RNF40O75150 AP002884.2-201ENST00000471647 395 ntBASIC4.29□□□□□ -1.72
RNF40O75150 RPL32P34-201ENST00000486380 400 ntBASIC4.29□□□□□ -1.72
RNF40O75150 SUMO2P16-201ENST00000519475 264 ntBASIC4.29□□□□□ -1.72
RNF40O75150 DEFB131E-201ENST00000532329 154 ntBASIC4.29□□□□□ -1.72
RNF40O75150 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC4.29□□□□□ -1.72
RNF40O75150 MIR4644-201ENST00000579929 84 ntBASIC4.29□□□□□ -1.72
RNF40O75150 uc_338.14-201ENST00000613162 166 ntBASIC4.29□□□□□ -1.72
RNF40O75150 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
RNF40O75150 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC4.29□□□□□ -1.72
RNF40O75150 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
RNF40O75150 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC4.28□□□□□ -1.72
RNF40O75150 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
RNF40O75150 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC4.28□□□□□ -1.72
RNF40O75150 Y_RNA.253-201ENST00000364562 112 ntBASIC4.28□□□□□ -1.72
RNF40O75150 SNORA4.2-201ENST00000365313 147 ntBASIC4.28□□□□□ -1.72
RNF40O75150 MIR759-201ENST00000390224 91 ntBASIC4.28□□□□□ -1.72
RNF40O75150 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
RNF40O75150 MIR1294-201ENST00000408503 142 ntBASIC4.28□□□□□ -1.72
RNF40O75150 MIR1179-201ENST00000408703 91 ntBASIC4.28□□□□□ -1.72
RNF40O75150 RNU6ATAC-201ENST00000408749 126 ntBASIC4.28□□□□□ -1.72
RNF40O75150 RPL23AP46-201ENST00000438548 490 ntBASIC4.28□□□□□ -1.72
RNF40O75150 AC010099.1-201ENST00000455434 375 ntBASIC4.28□□□□□ -1.72
RNF40O75150 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC4.28□□□□□ -1.72
RNF40O75150 HMGN1P7-201ENST00000491722 313 ntBASIC4.28□□□□□ -1.72
RNF40O75150 RNU2-13P-201ENST00000515909 113 ntBASIC4.28□□□□□ -1.72
RNF40O75150 RNU7-123P-201ENST00000515911 60 ntBASIC4.28□□□□□ -1.72
RNF40O75150 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC4.28□□□□□ -1.72
RNF40O75150 AC022523.2-201ENST00000561045 150 ntBASIC4.28□□□□□ -1.72
RNF40O75150 AL606490.9-201ENST00000603331 271 ntBASIC4.28□□□□□ -1.72
RNF40O75150 AC021443.1-201ENST00000604478 211 ntBASIC4.28□□□□□ -1.72
RNF40O75150 uc_338.32-201ENST00000615087 172 ntBASIC4.28□□□□□ -1.72
RNF40O75150 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
RNF40O75150 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.72
RNF40O75150 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
RNF40O75150 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.28□□□□□ -1.72
RNF40O75150 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
RNF40O75150 AC080128.1-201ENST00000474389 1917 ntBASIC4.27□□□□□ -1.73
RNF40O75150 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.27□□□□□ -1.73
RNF40O75150 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC4.27□□□□□ -1.73
RNF40O75150 RNU6-944P-201ENST00000364023 107 ntBASIC4.27□□□□□ -1.73
RNF40O75150 RNU4-36P-201ENST00000364294 144 ntBASIC4.27□□□□□ -1.73
RNF40O75150 RNY1P1-201ENST00000364372 112 ntBASIC4.27□□□□□ -1.73
RNF40O75150 RNU6-497P-201ENST00000365316 104 ntBASIC4.27□□□□□ -1.73
RNF40O75150 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC4.27□□□□□ -1.73
RNF40O75150 RN7SKP156-201ENST00000410308 342 ntBASIC4.27□□□□□ -1.73
RNF40O75150 AC096949.1-201ENST00000412047 152 ntBASIC4.27□□□□□ -1.73
RNF40O75150 RPL39P25-201ENST00000449384 154 ntBASIC4.27□□□□□ -1.73
RNF40O75150 snoU13.22-201ENST00000459428 104 ntBASIC4.27□□□□□ -1.73
RNF40O75150 RPS29P19-201ENST00000479709 171 ntBASIC4.27□□□□□ -1.73
RNF40O75150 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC4.27□□□□□ -1.73
RNF40O75150 RNU2-34P-201ENST00000516534 121 ntBASIC4.27□□□□□ -1.73
RNF40O75150 RNU6-1231P-201ENST00000517185 103 ntBASIC4.27□□□□□ -1.73
RNF40O75150 AC004486.1-201ENST00000546846 233 ntBASIC4.27□□□□□ -1.73
RNF40O75150 MIR3163-201ENST00000581592 73 ntBASIC4.27□□□□□ -1.73
RNF40O75150 AC244205.2-202ENST00000635781 342 ntBASIC4.27□□□□□ -1.73
RNF40O75150 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
RNF40O75150 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
RNF40O75150 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
RNF40O75150 RNU6-1099P-201ENST00000363533 107 ntBASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms