Protein–RNA interactions for Protein: O75127

PTCD1, Pentatricopeptide repeat-containing protein 1, mitochondrial, humanhuman

Known RBP Predictions only

Length 700 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1O75127 RNU6-1007P-201ENST00000516586 107 ntBASIC3.98□□□□□ -1.77
PTCD1O75127 RNU6-1098P-201ENST00000516772 96 ntBASIC3.98□□□□□ -1.77
PTCD1O75127 NDUFB9P3-201ENST00000521269 501 ntBASIC3.98□□□□□ -1.77
PTCD1O75127 RPL17P51-201ENST00000605218 238 ntBASIC3.98□□□□□ -1.77
PTCD1O75127 AL078604.3-201ENST00000615580 211 ntBASIC3.98□□□□□ -1.77
PTCD1O75127 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
PTCD1O75127 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
PTCD1O75127 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
PTCD1O75127 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
PTCD1O75127 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
PTCD1O75127 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
PTCD1O75127 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC3.97□□□□□ -1.77
PTCD1O75127 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
PTCD1O75127 Y_RNA.24-201ENST00000362508 103 ntBASIC3.97□□□□□ -1.77
PTCD1O75127 Y_RNA.251-201ENST00000364551 99 ntBASIC3.97□□□□□ -1.77
PTCD1O75127 SNORA14A-201ENST00000364773 135 ntBASIC3.97□□□□□ -1.77
PTCD1O75127 RNU6-1180P-201ENST00000364935 107 ntBASIC3.97□□□□□ -1.77
PTCD1O75127 Y_RNA.341-201ENST00000365341 102 ntBASIC3.97□□□□□ -1.77
PTCD1O75127 MT-TT-201ENST00000387460 66 ntBASIC3.97□□□□□ -1.77
PTCD1O75127 RNU6-588P-201ENST00000410281 105 ntBASIC3.97□□□□□ -1.77
PTCD1O75127 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.97□□□□□ -1.77
PTCD1O75127 AC245047.8-201ENST00000456455 284 ntBASIC3.97□□□□□ -1.77
PTCD1O75127 MIR449C-201ENST00000516047 92 ntBASIC3.97□□□□□ -1.77
PTCD1O75127 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC3.97□□□□□ -1.77
PTCD1O75127 AP001328.1-201ENST00000528550 176 ntBASIC3.97□□□□□ -1.77
PTCD1O75127 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC3.97□□□□□ -1.77
PTCD1O75127 MIR4474-201ENST00000579189 78 ntBASIC3.97□□□□□ -1.77
PTCD1O75127 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.97□□□□□ -1.77
PTCD1O75127 AC108081.1-201ENST00000604358 221 ntBASIC3.97□□□□□ -1.77
PTCD1O75127 AC013791.1-201ENST00000616619 62 ntBASIC3.97□□□□□ -1.77
PTCD1O75127 AP001340.1-201ENST00000624405 217 ntBASIC3.97□□□□□ -1.77
PTCD1O75127 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.97□□□□□ -1.77
PTCD1O75127 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.97□□□□□ -1.77
PTCD1O75127 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC3.96□□□□□ -1.77
PTCD1O75127 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.96□□□□□ -1.78
PTCD1O75127 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.96□□□□□ -1.78
PTCD1O75127 RNU6-103P-201ENST00000363686 107 ntBASIC3.96□□□□□ -1.78
PTCD1O75127 SNORD32B-201ENST00000364460 84 ntBASIC3.96□□□□□ -1.78
PTCD1O75127 SNORA51.4-201ENST00000364993 124 ntBASIC3.96□□□□□ -1.78
PTCD1O75127 RNU6-376P-201ENST00000384731 106 ntBASIC3.96□□□□□ -1.78
PTCD1O75127 MIR3074-201ENST00000384885 81 ntBASIC3.96□□□□□ -1.78
PTCD1O75127 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
PTCD1O75127 AL135938.1-201ENST00000443141 297 ntBASIC3.96□□□□□ -1.78
PTCD1O75127 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC3.96□□□□□ -1.78
PTCD1O75127 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC3.96□□□□□ -1.78
PTCD1O75127 MRPS36P2-201ENST00000512569 299 ntBASIC3.96□□□□□ -1.78
PTCD1O75127 RN7SKP132-201ENST00000516001 208 ntBASIC3.96□□□□□ -1.78
PTCD1O75127 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC3.96□□□□□ -1.78
PTCD1O75127 UCA1.1-201ENST00000620952 75 ntBASIC3.96□□□□□ -1.78
PTCD1O75127 AC012640.5-201ENST00000623897 319 ntBASIC3.96□□□□□ -1.78
PTCD1O75127 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.96□□□□□ -1.78
PTCD1O75127 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.95□□□□□ -1.78
PTCD1O75127 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
PTCD1O75127 SNORA72.4-201ENST00000384174 132 ntBASIC3.95□□□□□ -1.78
PTCD1O75127 MIR586-201ENST00000385035 97 ntBASIC3.95□□□□□ -1.78
PTCD1O75127 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC3.95□□□□□ -1.78
PTCD1O75127 RN7SL429P-201ENST00000479090 223 ntBASIC3.95□□□□□ -1.78
PTCD1O75127 RN7SL489P-201ENST00000486185 223 ntBASIC3.95□□□□□ -1.78
PTCD1O75127 RN7SL327P-201ENST00000488659 223 ntBASIC3.95□□□□□ -1.78
PTCD1O75127 SCARNA17.1-201ENST00000516211 143 ntBASIC3.95□□□□□ -1.78
PTCD1O75127 SCARNA17.2-201ENST00000516334 143 ntBASIC3.95□□□□□ -1.78
PTCD1O75127 MIR2114-201ENST00000516645 80 ntBASIC3.95□□□□□ -1.78
PTCD1O75127 U7.2-201ENST00000607576 63 ntBASIC3.95□□□□□ -1.78
PTCD1O75127 SCARNA17.4-201ENST00000614296 143 ntBASIC3.95□□□□□ -1.78
PTCD1O75127 RN7SL853P-201ENST00000617250 223 ntBASIC3.95□□□□□ -1.78
PTCD1O75127 MIR3914-2-201ENST00000637339 95 ntBASIC3.95□□□□□ -1.78
PTCD1O75127 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
PTCD1O75127 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
PTCD1O75127 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
PTCD1O75127 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
PTCD1O75127 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
PTCD1O75127 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.94□□□□□ -1.78
PTCD1O75127 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
PTCD1O75127 SNORA25.7-201ENST00000364375 127 ntBASIC3.94□□□□□ -1.78
PTCD1O75127 RNU6-915P-201ENST00000364943 103 ntBASIC3.94□□□□□ -1.78
PTCD1O75127 RNA5SP126-201ENST00000365092 109 ntBASIC3.94□□□□□ -1.78
PTCD1O75127 AP002088.1-201ENST00000382740 395 ntBASIC3.94□□□□□ -1.78
PTCD1O75127 RNU6-1083P-201ENST00000384022 107 ntBASIC3.94□□□□□ -1.78
PTCD1O75127 SNORA48.8-201ENST00000391324 134 ntBASIC3.94□□□□□ -1.78
PTCD1O75127 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.94□□□□□ -1.78
PTCD1O75127 RNU7-14P-201ENST00000459331 62 ntBASIC3.94□□□□□ -1.78
PTCD1O75127 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC3.94□□□□□ -1.78
PTCD1O75127 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.94□□□□□ -1.78
PTCD1O75127 RNU6-772P-201ENST00000516042 105 ntBASIC3.94□□□□□ -1.78
PTCD1O75127 RN7SKP179-201ENST00000516126 217 ntBASIC3.94□□□□□ -1.78
PTCD1O75127 SNORD33.1-201ENST00000516213 88 ntBASIC3.94□□□□□ -1.78
PTCD1O75127 AC090049.2-201ENST00000550377 109 ntBASIC3.94□□□□□ -1.78
PTCD1O75127 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.94□□□□□ -1.78
PTCD1O75127 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.94□□□□□ -1.78
PTCD1O75127 AC110079.1-202ENST00000635213 138 ntBASIC3.94□□□□□ -1.78
PTCD1O75127 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
PTCD1O75127 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
PTCD1O75127 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.94□□□□□ -1.78
PTCD1O75127 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
PTCD1O75127 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.93□□□□□ -1.78
PTCD1O75127 AL353746.1-201ENST00000566293 6881 ntBASIC3.93□□□□□ -1.78
PTCD1O75127 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
PTCD1O75127 RNU6-969P-201ENST00000383900 105 ntBASIC3.93□□□□□ -1.78
PTCD1O75127 RNU6-643P-201ENST00000384018 107 ntBASIC3.93□□□□□ -1.78
PTCD1O75127 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms