Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 snoU13.11-201ENST00000459219 104 ntBASIC0.61□□□□□ -2.31
SHOX2O60902 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC0.61□□□□□ -2.31
SHOX2O60902 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC0.61□□□□□ -2.31
SHOX2O60902 RNU6-445P-201ENST00000516949 107 ntBASIC0.61□□□□□ -2.31
SHOX2O60902 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC0.61□□□□□ -2.31
SHOX2O60902 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC0.61□□□□□ -2.31
SHOX2O60902 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC0.61□□□□□ -2.31
SHOX2O60902 AC245884.10-201ENST00000597355 337 ntBASIC0.61□□□□□ -2.31
SHOX2O60902 MTRNR2L2-201ENST00000604882 87 ntBASIC0.61□□□□□ -2.31
SHOX2O60902 MIR6835-201ENST00000621552 64 ntBASIC0.61□□□□□ -2.31
SHOX2O60902 AC079248.2-201ENST00000623779 326 ntBASIC0.61□□□□□ -2.31
SHOX2O60902 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC0.6□□□□□ -2.31
SHOX2O60902 RNU6-1120P-201ENST00000362988 108 ntBASIC0.6□□□□□ -2.31
SHOX2O60902 RNA5SP98-201ENST00000363158 137 ntBASIC0.6□□□□□ -2.31
SHOX2O60902 SNORA67.2-201ENST00000384300 149 ntBASIC0.6□□□□□ -2.31
SHOX2O60902 SNORD73A-201ENST00000386062 65 ntBASIC0.6□□□□□ -2.31
SHOX2O60902 MIR942-201ENST00000401111 86 ntBASIC0.6□□□□□ -2.31
SHOX2O60902 AL451046.2-201ENST00000403074 277 ntBASIC0.6□□□□□ -2.31
SHOX2O60902 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC0.6□□□□□ -2.31
SHOX2O60902 SNRPGP12-201ENST00000449481 213 ntBASIC0.6□□□□□ -2.31
SHOX2O60902 HMGB1P29-201ENST00000505659 499 ntBASIC0.6□□□□□ -2.31
SHOX2O60902 RPL39P5-202ENST00000512505 151 ntBASIC0.6□□□□□ -2.31
SHOX2O60902 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC0.6□□□□□ -2.31
SHOX2O60902 RNU6-758P-201ENST00000516292 89 ntBASIC0.6□□□□□ -2.31
SHOX2O60902 AC090049.2-201ENST00000550377 109 ntBASIC0.6□□□□□ -2.31
SHOX2O60902 HIF1AP1-201ENST00000553642 175 ntBASIC0.6□□□□□ -2.31
SHOX2O60902 AC022432.1-201ENST00000595739 310 ntBASIC0.6□□□□□ -2.31
SHOX2O60902 SNORA28-201ENST00000606769 126 ntBASIC0.6□□□□□ -2.31
SHOX2O60902 AC087683.2-201ENST00000611384 326 ntBASIC0.6□□□□□ -2.31
SHOX2O60902 AC243829.3-201ENST00000622177 108 ntBASIC0.6□□□□□ -2.31
SHOX2O60902 AC106754.2-201ENST00000623006 233 ntBASIC0.6□□□□□ -2.31
SHOX2O60902 AC139792.3-201ENST00000623525 224 ntBASIC0.6□□□□□ -2.31
SHOX2O60902 RNU6-199P-201ENST00000362954 107 ntBASIC0.59□□□□□ -2.31
SHOX2O60902 RNU6-553P-201ENST00000364047 96 ntBASIC0.59□□□□□ -2.31
SHOX2O60902 MIR329-1-201ENST00000385028 80 ntBASIC0.59□□□□□ -2.31
SHOX2O60902 AF228730.1-201ENST00000397972 663 ntBASIC0.59□□□□□ -2.31
SHOX2O60902 RNU2-9P-201ENST00000410194 145 ntBASIC0.59□□□□□ -2.31
SHOX2O60902 CYCSP46-201ENST00000423569 204 ntBASIC0.59□□□□□ -2.31
SHOX2O60902 MTND3P9-201ENST00000429526 346 ntBASIC0.59□□□□□ -2.31
SHOX2O60902 CETN4P-201ENST00000432407 469 ntBASIC0.59□□□□□ -2.31
SHOX2O60902 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC0.59□□□□□ -2.31
SHOX2O60902 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.59□□□□□ -2.31
SHOX2O60902 RNU6-232P-201ENST00000517144 64 ntBASIC0.59□□□□□ -2.31
SHOX2O60902 MRPS36P4-201ENST00000534436 298 ntBASIC0.59□□□□□ -2.31
SHOX2O60902 AC122133.1-201ENST00000613964 233 ntBASIC0.59□□□□□ -2.31
SHOX2O60902 AC022960.3-201ENST00000619794 441 ntBASIC0.59□□□□□ -2.31
SHOX2O60902 AF246928.1-201ENST00000623768 87 ntBASIC0.59□□□□□ -2.31
SHOX2O60902 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC0.59□□□□□ -2.31
SHOX2O60902 SCARNA4-201ENST00000629045 128 ntBASIC0.59□□□□□ -2.31
SHOX2O60902 FGF7P2-201ENST00000332473 296 ntBASIC0.58□□□□□ -2.32
SHOX2O60902 RNU6-923P-201ENST00000364753 107 ntBASIC0.58□□□□□ -2.32
SHOX2O60902 MIR508-201ENST00000384857 115 ntBASIC0.58□□□□□ -2.32
SHOX2O60902 SNORD41-201ENST00000386967 70 ntBASIC0.58□□□□□ -2.32
SHOX2O60902 RNA5SP511-201ENST00000410487 115 ntBASIC0.58□□□□□ -2.32
SHOX2O60902 RNU6-248P-201ENST00000410720 107 ntBASIC0.58□□□□□ -2.32
SHOX2O60902 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.58□□□□□ -2.32
SHOX2O60902 BX295541.1-201ENST00000417774 250 ntBASIC0.58□□□□□ -2.32
SHOX2O60902 AL606489.2-201ENST00000433886 234 ntBASIC0.58□□□□□ -2.32
SHOX2O60902 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC0.58□□□□□ -2.32
SHOX2O60902 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.58□□□□□ -2.32
SHOX2O60902 SNORD57-201ENST00000448188 72 ntBASIC0.58□□□□□ -2.32
SHOX2O60902 SNORA14.1-201ENST00000516113 141 ntBASIC0.58□□□□□ -2.32
SHOX2O60902 AC004812.1-201ENST00000540773 146 ntBASIC0.58□□□□□ -2.32
SHOX2O60902 SUB1P2-201ENST00000556401 297 ntBASIC0.58□□□□□ -2.32
SHOX2O60902 AC009094.1-201ENST00000564443 426 ntBASIC0.58□□□□□ -2.32
SHOX2O60902 AC023932.2-201ENST00000603176 175 ntBASIC0.58□□□□□ -2.32
SHOX2O60902 AC008536.2-201ENST00000607284 349 ntBASIC0.58□□□□□ -2.32
SHOX2O60902 SNORD11B-201ENST00000607707 90 ntBASIC0.58□□□□□ -2.32
SHOX2O60902 AC067863.3-201ENST00000624172 122 ntBASIC0.58□□□□□ -2.32
SHOX2O60902 AL390237.1-201ENST00000404226 1415 ntBASIC0.57□□□□□ -2.32
SHOX2O60902 Y_RNA.123-201ENST00000363338 102 ntBASIC0.57□□□□□ -2.32
SHOX2O60902 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC0.57□□□□□ -2.32
SHOX2O60902 RNU6-245P-201ENST00000384020 107 ntBASIC0.57□□□□□ -2.32
SHOX2O60902 RNU6-110P-201ENST00000384508 104 ntBASIC0.57□□□□□ -2.32
SHOX2O60902 RNU6-297P-201ENST00000384636 107 ntBASIC0.57□□□□□ -2.32
SHOX2O60902 SNX3P1X-201ENST00000414887 175 ntBASIC0.57□□□□□ -2.32
SHOX2O60902 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC0.57□□□□□ -2.32
SHOX2O60902 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC0.57□□□□□ -2.32
SHOX2O60902 MTCO3P18-201ENST00000440206 761 ntBASIC0.57□□□□□ -2.32
SHOX2O60902 NDUFB4P10-201ENST00000452541 359 ntBASIC0.57□□□□□ -2.32
SHOX2O60902 RNU7-180P-201ENST00000459240 63 ntBASIC0.57□□□□□ -2.32
SHOX2O60902 RPS27P22-201ENST00000478056 241 ntBASIC0.57□□□□□ -2.32
SHOX2O60902 BET1P1-201ENST00000482276 359 ntBASIC0.57□□□□□ -2.32
SHOX2O60902 RNU7-99P-201ENST00000516271 62 ntBASIC0.57□□□□□ -2.32
SHOX2O60902 RNA5SP255-201ENST00000516370 107 ntBASIC0.57□□□□□ -2.32
SHOX2O60902 MTND4P7-201ENST00000523876 130 ntBASIC0.57□□□□□ -2.32
SHOX2O60902 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC0.57□□□□□ -2.32
SHOX2O60902 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC0.57□□□□□ -2.32
SHOX2O60902 MDM2-233ENST00000545204 398 ntTSL 5 BASIC0.57□□□□□ -2.32
SHOX2O60902 SCOCP1-201ENST00000554676 349 ntBASIC0.57□□□□□ -2.32
SHOX2O60902 uc_338.34-201ENST00000617467 174 ntBASIC0.57□□□□□ -2.32
SHOX2O60902 AC072046.2-201ENST00000618366 268 ntBASIC0.57□□□□□ -2.32
SHOX2O60902 uc_338.22-201ENST00000622722 187 ntBASIC0.57□□□□□ -2.32
SHOX2O60902 AC005609.4-201ENST00000625071 447 ntBASIC0.57□□□□□ -2.32
SHOX2O60902 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.57□□□□□ -2.32
SHOX2O60902 ELL2P3-201ENST00000457883 1602 ntBASIC0.56□□□□□ -2.32
SHOX2O60902 RNU6-1266P-201ENST00000362794 105 ntBASIC0.56□□□□□ -2.32
SHOX2O60902 Y_RNA.363-201ENST00000365529 113 ntBASIC0.56□□□□□ -2.32
SHOX2O60902 RNU6-969P-201ENST00000383900 105 ntBASIC0.56□□□□□ -2.32
SHOX2O60902 SNORA12.1-201ENST00000390873 148 ntBASIC0.56□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 87.9 ms