Protein–RNA interactions for Protein: O60391

GRIN3B, Glutamate receptor ionotropic, NMDA 3B, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN3BO60391 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.59□□□□□ -1.83
GRIN3BO60391 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
GRIN3BO60391 RNU6-1325P-201ENST00000364905 105 ntBASIC3.59□□□□□ -1.83
GRIN3BO60391 Y_RNA.400-201ENST00000383963 111 ntBASIC3.59□□□□□ -1.83
GRIN3BO60391 RNA5SP504-201ENST00000410676 117 ntBASIC3.59□□□□□ -1.83
GRIN3BO60391 AC097463.2-201ENST00000421074 142 ntBASIC3.59□□□□□ -1.83
GRIN3BO60391 AC008267.6-201ENST00000441664 139 ntBASIC3.59□□□□□ -1.83
GRIN3BO60391 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC3.59□□□□□ -1.83
GRIN3BO60391 RNA5SP458-201ENST00000516188 119 ntBASIC3.59□□□□□ -1.83
GRIN3BO60391 RNA5SP148-201ENST00000516527 94 ntBASIC3.59□□□□□ -1.83
GRIN3BO60391 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC3.59□□□□□ -1.83
GRIN3BO60391 MIR5006-201ENST00000583027 110 ntBASIC3.59□□□□□ -1.83
GRIN3BO60391 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.59□□□□□ -1.84
GRIN3BO60391 AL391516.1-201ENST00000554380 2449 ntBASIC3.59□□□□□ -1.84
GRIN3BO60391 MAPK10-322ENST00000641485 4530 ntBASIC3.58□□□□□ -1.84
GRIN3BO60391 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
GRIN3BO60391 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC3.58□□□□□ -1.84
GRIN3BO60391 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
GRIN3BO60391 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
GRIN3BO60391 SNORA18.2-201ENST00000383865 132 ntBASIC3.58□□□□□ -1.84
GRIN3BO60391 MIR569-201ENST00000385228 96 ntBASIC3.58□□□□□ -1.84
GRIN3BO60391 RNU6ATAC37P-201ENST00000408328 131 ntBASIC3.58□□□□□ -1.84
GRIN3BO60391 EIF4EP4-201ENST00000424916 578 ntBASIC3.58□□□□□ -1.84
GRIN3BO60391 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC3.58□□□□□ -1.84
GRIN3BO60391 RPL31P41-201ENST00000477967 372 ntBASIC3.58□□□□□ -1.84
GRIN3BO60391 TRAPPC2P7-201ENST00000509650 231 ntBASIC3.58□□□□□ -1.84
GRIN3BO60391 RNU2-44P-201ENST00000516795 194 ntBASIC3.58□□□□□ -1.84
GRIN3BO60391 MIR4648-201ENST00000580107 72 ntBASIC3.58□□□□□ -1.84
GRIN3BO60391 AC005828.6-201ENST00000606610 232 ntBASIC3.58□□□□□ -1.84
GRIN3BO60391 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC3.58□□□□□ -1.84
GRIN3BO60391 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
GRIN3BO60391 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC3.57□□□□□ -1.84
GRIN3BO60391 RNA5SP99-201ENST00000364020 114 ntBASIC3.57□□□□□ -1.84
GRIN3BO60391 Y_RNA.215-201ENST00000364204 112 ntBASIC3.57□□□□□ -1.84
GRIN3BO60391 RNU6-454P-201ENST00000364292 107 ntBASIC3.57□□□□□ -1.84
GRIN3BO60391 Y_RNA.343-201ENST00000365354 112 ntBASIC3.57□□□□□ -1.84
GRIN3BO60391 SNORA9.2-201ENST00000365361 133 ntBASIC3.57□□□□□ -1.84
GRIN3BO60391 SNORA67.2-201ENST00000384300 149 ntBASIC3.57□□□□□ -1.84
GRIN3BO60391 Y_RNA.488-201ENST00000384403 102 ntBASIC3.57□□□□□ -1.84
GRIN3BO60391 TOMM22P2-201ENST00000430735 237 ntBASIC3.57□□□□□ -1.84
GRIN3BO60391 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC3.57□□□□□ -1.84
GRIN3BO60391 MIR3145-201ENST00000580727 82 ntBASIC3.57□□□□□ -1.84
GRIN3BO60391 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC3.57□□□□□ -1.84
GRIN3BO60391 DEFB117-201ENST00000602356 141 ntBASIC3.57□□□□□ -1.84
GRIN3BO60391 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.57□□□□□ -1.84
GRIN3BO60391 AC008873.1-201ENST00000625051 138 ntBASIC3.57□□□□□ -1.84
GRIN3BO60391 MTND1P7-201ENST00000632801 297 ntBASIC3.57□□□□□ -1.84
GRIN3BO60391 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
GRIN3BO60391 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.57□□□□□ -1.84
GRIN3BO60391 AC103988.1-201ENST00000566382 2177 ntBASIC3.56□□□□□ -1.84
GRIN3BO60391 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.56□□□□□ -1.84
GRIN3BO60391 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
GRIN3BO60391 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.56□□□□□ -1.84
GRIN3BO60391 snoU2_19.1-201ENST00000362361 80 ntBASIC3.56□□□□□ -1.84
GRIN3BO60391 SNORA63.4-201ENST00000362763 126 ntBASIC3.56□□□□□ -1.84
GRIN3BO60391 RNU6-1272P-201ENST00000362776 107 ntBASIC3.56□□□□□ -1.84
GRIN3BO60391 Y_RNA.262-201ENST00000364641 102 ntBASIC3.56□□□□□ -1.84
GRIN3BO60391 RNA5SP354-201ENST00000391247 136 ntBASIC3.56□□□□□ -1.84
GRIN3BO60391 MIR1289-2-201ENST00000408360 111 ntBASIC3.56□□□□□ -1.84
GRIN3BO60391 RNA5SP425-201ENST00000410336 112 ntBASIC3.56□□□□□ -1.84
GRIN3BO60391 Z98742.3-201ENST00000418637 326 ntBASIC3.56□□□□□ -1.84
GRIN3BO60391 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC3.56□□□□□ -1.84
GRIN3BO60391 RNU6-436P-201ENST00000516171 114 ntBASIC3.56□□□□□ -1.84
GRIN3BO60391 SNORD116-25-201ENST00000516517 92 ntBASIC3.56□□□□□ -1.84
GRIN3BO60391 RNA5SP170-201ENST00000517150 101 ntBASIC3.56□□□□□ -1.84
GRIN3BO60391 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.56□□□□□ -1.84
GRIN3BO60391 MIR5692C2-201ENST00000577959 77 ntBASIC3.56□□□□□ -1.84
GRIN3BO60391 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.56□□□□□ -1.84
GRIN3BO60391 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC3.56□□□□□ -1.84
GRIN3BO60391 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
GRIN3BO60391 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.55□□□□□ -1.84
GRIN3BO60391 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC3.55□□□□□ -1.84
GRIN3BO60391 MAPK10-362ENST00000641864 4484 ntBASIC3.55□□□□□ -1.84
GRIN3BO60391 Y_RNA.4-201ENST00000362333 112 ntBASIC3.55□□□□□ -1.84
GRIN3BO60391 Y_RNA.127-201ENST00000363386 109 ntBASIC3.55□□□□□ -1.84
GRIN3BO60391 RNA5SP139-201ENST00000364340 117 ntBASIC3.55□□□□□ -1.84
GRIN3BO60391 SNORD32B-201ENST00000364460 84 ntBASIC3.55□□□□□ -1.84
GRIN3BO60391 RNU6-211P-201ENST00000384047 107 ntBASIC3.55□□□□□ -1.84
GRIN3BO60391 MIR29B2-201ENST00000385055 81 ntBASIC3.55□□□□□ -1.84
GRIN3BO60391 U3.40-201ENST00000408706 208 ntBASIC3.55□□□□□ -1.84
GRIN3BO60391 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.55□□□□□ -1.84
GRIN3BO60391 AC024067.1-201ENST00000426199 223 ntBASIC3.55□□□□□ -1.84
GRIN3BO60391 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.55□□□□□ -1.84
GRIN3BO60391 RNA5SP112-201ENST00000515937 99 ntBASIC3.55□□□□□ -1.84
GRIN3BO60391 RNU6-1333P-201ENST00000516162 93 ntBASIC3.55□□□□□ -1.84
GRIN3BO60391 RNU6-107P-201ENST00000516643 102 ntBASIC3.55□□□□□ -1.84
GRIN3BO60391 CTSLP2-204ENST00000629029 392 ntBASIC3.55□□□□□ -1.84
GRIN3BO60391 snoU18.1-201ENST00000629629 71 ntBASIC3.55□□□□□ -1.84
GRIN3BO60391 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
GRIN3BO60391 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC3.55□□□□□ -1.84
GRIN3BO60391 U3.8-201ENST00000363675 217 ntBASIC3.54□□□□□ -1.84
GRIN3BO60391 Y_RNA.164-201ENST00000363709 102 ntBASIC3.54□□□□□ -1.84
GRIN3BO60391 RNU6-151P-201ENST00000364158 107 ntBASIC3.54□□□□□ -1.84
GRIN3BO60391 SNORD87-201ENST00000364849 89 ntBASIC3.54□□□□□ -1.84
GRIN3BO60391 Y_RNA.308-201ENST00000365043 101 ntBASIC3.54□□□□□ -1.84
GRIN3BO60391 Y_RNA.329-201ENST00000365209 107 ntBASIC3.54□□□□□ -1.84
GRIN3BO60391 RNU6-1083P-201ENST00000384022 107 ntBASIC3.54□□□□□ -1.84
GRIN3BO60391 5S_rRNA.2-201ENST00000391293 112 ntBASIC3.54□□□□□ -1.84
GRIN3BO60391 AL135786.1-201ENST00000415892 214 ntBASIC3.54□□□□□ -1.84
GRIN3BO60391 Z98742.2-201ENST00000431564 187 ntBASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms