Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 TOMM20P2-201ENST00000540082 421 ntBASIC4.25□□□□□ -1.73
ACTN4O43707 RN7SL703P-201ENST00000578485 302 ntBASIC4.25□□□□□ -1.73
ACTN4O43707 MIR4697-201ENST00000582977 78 ntBASIC4.25□□□□□ -1.73
ACTN4O43707 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC4.25□□□□□ -1.73
ACTN4O43707 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
ACTN4O43707 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
ACTN4O43707 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC4.24□□□□□ -1.73
ACTN4O43707 RNU6-690P-201ENST00000365242 106 ntBASIC4.24□□□□□ -1.73
ACTN4O43707 RNU6-813P-201ENST00000384691 107 ntBASIC4.24□□□□□ -1.73
ACTN4O43707 AL117339.2-201ENST00000430475 180 ntBASIC4.24□□□□□ -1.73
ACTN4O43707 AL162151.2-201ENST00000448875 158 ntBASIC4.24□□□□□ -1.73
ACTN4O43707 RPL32P34-201ENST00000486380 400 ntBASIC4.24□□□□□ -1.73
ACTN4O43707 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC4.24□□□□□ -1.73
ACTN4O43707 MIR6810-201ENST00000622701 70 ntBASIC4.24□□□□□ -1.73
ACTN4O43707 AC244205.2-202ENST00000635781 342 ntBASIC4.24□□□□□ -1.73
ACTN4O43707 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
ACTN4O43707 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
ACTN4O43707 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
ACTN4O43707 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC4.23□□□□□ -1.73
ACTN4O43707 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
ACTN4O43707 RNA5SP97-201ENST00000365006 84 ntBASIC4.23□□□□□ -1.73
ACTN4O43707 RN7SL385P-201ENST00000468873 276 ntBASIC4.23□□□□□ -1.73
ACTN4O43707 RN7SKP83-201ENST00000516512 178 ntBASIC4.23□□□□□ -1.73
ACTN4O43707 RNU6-1096P-201ENST00000517089 102 ntBASIC4.23□□□□□ -1.73
ACTN4O43707 AC022695.1-201ENST00000522089 237 ntBASIC4.23□□□□□ -1.73
ACTN4O43707 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC4.23□□□□□ -1.73
ACTN4O43707 AC244505.7-201ENST00000599675 272 ntBASIC4.23□□□□□ -1.73
ACTN4O43707 RNA5SP196-201ENST00000625967 102 ntBASIC4.23□□□□□ -1.73
ACTN4O43707 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC4.23□□□□□ -1.73
ACTN4O43707 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC4.23□□□□□ -1.73
ACTN4O43707 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
ACTN4O43707 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
ACTN4O43707 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
ACTN4O43707 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
ACTN4O43707 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
ACTN4O43707 SPRR2C-201ENST00000290702 219 ntBASIC4.22□□□□□ -1.73
ACTN4O43707 RNU6-486P-201ENST00000363116 107 ntBASIC4.22□□□□□ -1.73
ACTN4O43707 Y_RNA.344-201ENST00000365381 112 ntBASIC4.22□□□□□ -1.73
ACTN4O43707 Y_RNA.593-201ENST00000410292 98 ntBASIC4.22□□□□□ -1.73
ACTN4O43707 Z98742.2-201ENST00000431564 187 ntBASIC4.22□□□□□ -1.73
ACTN4O43707 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC4.22□□□□□ -1.73
ACTN4O43707 RNU6-893P-201ENST00000458841 100 ntBASIC4.22□□□□□ -1.73
ACTN4O43707 RN7SKP282-201ENST00000516824 299 ntBASIC4.22□□□□□ -1.73
ACTN4O43707 AC068657.1-201ENST00000520807 306 ntBASIC4.22□□□□□ -1.73
ACTN4O43707 MIR3202-2-201ENST00000635980 79 ntBASIC4.22□□□□□ -1.73
ACTN4O43707 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
ACTN4O43707 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
ACTN4O43707 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
ACTN4O43707 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC4.22□□□□□ -1.73
ACTN4O43707 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC4.21□□□□□ -1.73
ACTN4O43707 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
ACTN4O43707 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
ACTN4O43707 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC4.21□□□□□ -1.74
ACTN4O43707 Y_RNA.17-201ENST00000362433 111 ntBASIC4.21□□□□□ -1.74
ACTN4O43707 SNORA70.2-201ENST00000364506 135 ntBASIC4.21□□□□□ -1.74
ACTN4O43707 RNU6-283P-201ENST00000364788 107 ntBASIC4.21□□□□□ -1.74
ACTN4O43707 RNU6-438P-201ENST00000365561 103 ntBASIC4.21□□□□□ -1.74
ACTN4O43707 MIR548A2-201ENST00000384956 97 ntBASIC4.21□□□□□ -1.74
ACTN4O43707 MT-TI-201ENST00000387365 69 ntBASIC4.21□□□□□ -1.74
ACTN4O43707 DBIP2-201ENST00000419076 262 ntBASIC4.21□□□□□ -1.74
ACTN4O43707 SNRPGP10-201ENST00000432323 225 ntBASIC4.21□□□□□ -1.74
ACTN4O43707 SNRPGP13-201ENST00000442212 177 ntBASIC4.21□□□□□ -1.74
ACTN4O43707 HMGN1P7-201ENST00000491722 313 ntBASIC4.21□□□□□ -1.74
ACTN4O43707 RNU2-58P-201ENST00000516403 183 ntBASIC4.21□□□□□ -1.74
ACTN4O43707 PARP1P2-201ENST00000556806 195 ntBASIC4.21□□□□□ -1.74
ACTN4O43707 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC4.21□□□□□ -1.74
ACTN4O43707 MIR5197-201ENST00000583721 112 ntBASIC4.21□□□□□ -1.74
ACTN4O43707 AC002076.2-201ENST00000617362 122 ntBASIC4.21□□□□□ -1.74
ACTN4O43707 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC4.21□□□□□ -1.74
ACTN4O43707 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
ACTN4O43707 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC4.2□□□□□ -1.74
ACTN4O43707 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
ACTN4O43707 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
ACTN4O43707 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
ACTN4O43707 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC4.2□□□□□ -1.74
ACTN4O43707 RNA5SP283-201ENST00000365604 119 ntBASIC4.2□□□□□ -1.74
ACTN4O43707 MIR548D2-201ENST00000384955 97 ntBASIC4.2□□□□□ -1.74
ACTN4O43707 MIR520G-201ENST00000385064 90 ntBASIC4.2□□□□□ -1.74
ACTN4O43707 RPL39P25-201ENST00000449384 154 ntBASIC4.2□□□□□ -1.74
ACTN4O43707 DEFB131E-201ENST00000532329 154 ntBASIC4.2□□□□□ -1.74
ACTN4O43707 AC021443.1-201ENST00000604478 211 ntBASIC4.2□□□□□ -1.74
ACTN4O43707 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC4.2□□□□□ -1.74
ACTN4O43707 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC4.19□□□□□ -1.74
ACTN4O43707 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.19□□□□□ -1.74
ACTN4O43707 IDE-202ENST00000371581 4480 ntTSL 2 BASIC4.19□□□□□ -1.74
ACTN4O43707 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
ACTN4O43707 RNU4-36P-201ENST00000364294 144 ntBASIC4.19□□□□□ -1.74
ACTN4O43707 RNA5SP424-201ENST00000390988 115 ntBASIC4.19□□□□□ -1.74
ACTN4O43707 Z98941.1-201ENST00000407764 100 ntBASIC4.19□□□□□ -1.74
ACTN4O43707 MIR1255A-201ENST00000408338 113 ntBASIC4.19□□□□□ -1.74
ACTN4O43707 AL133162.1-201ENST00000463228 453 ntBASIC4.19□□□□□ -1.74
ACTN4O43707 RNU2-34P-201ENST00000516534 121 ntBASIC4.19□□□□□ -1.74
ACTN4O43707 SUMO2P16-201ENST00000519475 264 ntBASIC4.19□□□□□ -1.74
ACTN4O43707 AC008507.4-201ENST00000585464 127 ntBASIC4.19□□□□□ -1.74
ACTN4O43707 AL606490.9-201ENST00000603331 271 ntBASIC4.19□□□□□ -1.74
ACTN4O43707 AF117829.1-206ENST00000621883 3802 ntBASIC4.19□□□□□ -1.74
ACTN4O43707 MIR376A2-201ENST00000636782 80 ntBASIC4.19□□□□□ -1.74
ACTN4O43707 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC4.19□□□□□ -1.74
ACTN4O43707 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
ACTN4O43707 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms