Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 RNU6-945P-201ENST00000383947 107 ntBASIC0.38□□□□□ -2.35
SGCEO43556 MTATP6P18-201ENST00000417994 673 ntBASIC0.38□□□□□ -2.35
SGCEO43556 AC244023.1-201ENST00000426884 112 ntBASIC0.38□□□□□ -2.35
SGCEO43556 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC0.38□□□□□ -2.35
SGCEO43556 AC093850.1-201ENST00000454121 251 ntBASIC0.38□□□□□ -2.35
SGCEO43556 MTCO3P38-201ENST00000468910 766 ntBASIC0.38□□□□□ -2.35
SGCEO43556 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC0.38□□□□□ -2.35
SGCEO43556 AC022868.1-201ENST00000517767 391 ntBASIC0.38□□□□□ -2.35
SGCEO43556 AC104576.1-201ENST00000524225 88 ntBASIC0.38□□□□□ -2.35
SGCEO43556 AC242498.1-201ENST00000604134 111 ntBASIC0.38□□□□□ -2.35
SGCEO43556 AC005014.3-201ENST00000605985 190 ntBASIC0.38□□□□□ -2.35
SGCEO43556 AC122133.1-201ENST00000613964 233 ntBASIC0.38□□□□□ -2.35
SGCEO43556 AC072046.2-201ENST00000618366 268 ntBASIC0.38□□□□□ -2.35
SGCEO43556 AC243994.1-201ENST00000618627 109 ntBASIC0.38□□□□□ -2.35
SGCEO43556 AF246928.1-201ENST00000623768 87 ntBASIC0.38□□□□□ -2.35
SGCEO43556 AC079248.2-201ENST00000623779 326 ntBASIC0.38□□□□□ -2.35
SGCEO43556 AC005609.4-201ENST00000625071 447 ntBASIC0.38□□□□□ -2.35
SGCEO43556 MIR6079-201ENST00000635807 62 ntBASIC0.38□□□□□ -2.35
SGCEO43556 SNORD115-8-201ENST00000363856 82 ntBASIC0.37□□□□□ -2.35
SGCEO43556 SNORD115-38-201ENST00000365037 82 ntBASIC0.37□□□□□ -2.35
SGCEO43556 SNORD89-201ENST00000390981 114 ntBASIC0.37□□□□□ -2.35
SGCEO43556 RNU6-248P-201ENST00000410720 107 ntBASIC0.37□□□□□ -2.35
SGCEO43556 RNA5SP247-201ENST00000411181 105 ntBASIC0.37□□□□□ -2.35
SGCEO43556 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC0.37□□□□□ -2.35
SGCEO43556 AC098934.3-201ENST00000430450 190 ntBASIC0.37□□□□□ -2.35
SGCEO43556 AC104332.1-201ENST00000440471 797 ntBASIC0.37□□□□□ -2.35
SGCEO43556 AC093019.1-201ENST00000443135 252 ntBASIC0.37□□□□□ -2.35
SGCEO43556 RNU7-63P-201ENST00000459054 62 ntBASIC0.37□□□□□ -2.35
SGCEO43556 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC0.37□□□□□ -2.35
SGCEO43556 RNU6-189P-201ENST00000516120 101 ntBASIC0.37□□□□□ -2.35
SGCEO43556 RNU2-56P-201ENST00000516826 190 ntBASIC0.37□□□□□ -2.35
SGCEO43556 RNU6-58P-201ENST00000517143 103 ntBASIC0.37□□□□□ -2.35
SGCEO43556 RNU6-232P-201ENST00000517144 64 ntBASIC0.37□□□□□ -2.35
SGCEO43556 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC0.37□□□□□ -2.35
SGCEO43556 AC004223.2-201ENST00000590309 544 ntBASIC0.37□□□□□ -2.35
SGCEO43556 AL096861.1-201ENST00000610899 123 ntBASIC0.37□□□□□ -2.35
SGCEO43556 AC068787.1-201ENST00000623908 691 ntBASIC0.37□□□□□ -2.35
SGCEO43556 SRP54-214ENST00000630962 162 ntTSL 5 BASIC0.37□□□□□ -2.35
SGCEO43556 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.37□□□□□ -2.35
SGCEO43556 RNU6-82P-201ENST00000363970 107 ntBASIC0.36□□□□□ -2.35
SGCEO43556 RNU6-1335P-201ENST00000365426 107 ntBASIC0.36□□□□□ -2.35
SGCEO43556 RNU6-996P-201ENST00000365438 107 ntBASIC0.36□□□□□ -2.35
SGCEO43556 MIR521-1-201ENST00000384902 87 ntBASIC0.36□□□□□ -2.35
SGCEO43556 AL606923.1-201ENST00000406616 190 ntBASIC0.36□□□□□ -2.35
SGCEO43556 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.36□□□□□ -2.35
SGCEO43556 MTCYBP8-201ENST00000422855 651 ntBASIC0.36□□□□□ -2.35
SGCEO43556 RPL23AP50-201ENST00000434149 455 ntBASIC0.36□□□□□ -2.35
SGCEO43556 MTND2P39-201ENST00000457230 764 ntBASIC0.36□□□□□ -2.35
SGCEO43556 OR9P1P-201ENST00000496431 281 ntBASIC0.36□□□□□ -2.35
SGCEO43556 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC0.36□□□□□ -2.35
SGCEO43556 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC0.36□□□□□ -2.35
SGCEO43556 RNA5SP220-201ENST00000516298 104 ntBASIC0.36□□□□□ -2.35
SGCEO43556 SNORD111.1-201ENST00000516421 86 ntBASIC0.36□□□□□ -2.35
SGCEO43556 RNU6-1110P-201ENST00000516462 101 ntBASIC0.36□□□□□ -2.35
SGCEO43556 SNORA25.14-201ENST00000516481 132 ntBASIC0.36□□□□□ -2.35
SGCEO43556 RPL21P9-201ENST00000556149 474 ntBASIC0.36□□□□□ -2.35
SGCEO43556 AL136317.1-201ENST00000612653 226 ntBASIC0.36□□□□□ -2.35
SGCEO43556 MIR6513-201ENST00000621188 64 ntBASIC0.36□□□□□ -2.35
SGCEO43556 MIR5087-201ENST00000635826 76 ntBASIC0.36□□□□□ -2.35
SGCEO43556 FGF7P2-201ENST00000332473 296 ntBASIC0.35□□□□□ -2.35
SGCEO43556 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.35□□□□□ -2.35
SGCEO43556 RNU6-553P-201ENST00000364047 96 ntBASIC0.35□□□□□ -2.35
SGCEO43556 SNORD87-201ENST00000364849 89 ntBASIC0.35□□□□□ -2.35
SGCEO43556 RNU1-133P-201ENST00000364867 167 ntBASIC0.35□□□□□ -2.35
SGCEO43556 Y_RNA.330-201ENST00000365230 109 ntBASIC0.35□□□□□ -2.35
SGCEO43556 RNU6-1067P-201ENST00000384752 107 ntBASIC0.35□□□□□ -2.35
SGCEO43556 RNU6-1237P-201ENST00000384777 107 ntBASIC0.35□□□□□ -2.35
SGCEO43556 RNA5SP482-201ENST00000391269 118 ntBASIC0.35□□□□□ -2.35
SGCEO43556 MIR450B-201ENST00000401182 78 ntBASIC0.35□□□□□ -2.35
SGCEO43556 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC0.35□□□□□ -2.35
SGCEO43556 MTCO2P11-201ENST00000431069 680 ntBASIC0.35□□□□□ -2.35
SGCEO43556 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC0.35□□□□□ -2.35
SGCEO43556 MRPS10P1-201ENST00000448483 130 ntBASIC0.35□□□□□ -2.35
SGCEO43556 RNU7-125P-201ENST00000458760 62 ntBASIC0.35□□□□□ -2.35
SGCEO43556 AL157687.1-201ENST00000554853 619 ntBASIC0.35□□□□□ -2.35
SGCEO43556 MIR3913-1-201ENST00000577744 102 ntBASIC0.35□□□□□ -2.35
SGCEO43556 AC131055.1-201ENST00000584626 316 ntBASIC0.35□□□□□ -2.35
SGCEO43556 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC0.35□□□□□ -2.35
SGCEO43556 AC103705.1-201ENST00000619013 241 ntBASIC0.35□□□□□ -2.35
SGCEO43556 RNA5SP264-201ENST00000363115 107 ntBASIC0.34□□□□□ -2.36
SGCEO43556 Y_RNA.226-201ENST00000364337 114 ntBASIC0.34□□□□□ -2.36
SGCEO43556 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.34□□□□□ -2.36
SGCEO43556 SNORA50A-201ENST00000384225 134 ntBASIC0.34□□□□□ -2.36
SGCEO43556 RNU6-933P-201ENST00000384424 107 ntBASIC0.34□□□□□ -2.36
SGCEO43556 MIR487A-201ENST00000385009 80 ntBASIC0.34□□□□□ -2.36
SGCEO43556 RNU6-325P-201ENST00000411132 105 ntBASIC0.34□□□□□ -2.36
SGCEO43556 AL663109.1-201ENST00000411498 844 ntBASIC0.34□□□□□ -2.36
SGCEO43556 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC0.34□□□□□ -2.36
SGCEO43556 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC0.34□□□□□ -2.36
SGCEO43556 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC0.34□□□□□ -2.36
SGCEO43556 MTCO2P18-201ENST00000457151 658 ntBASIC0.34□□□□□ -2.36
SGCEO43556 TPTE2P5-203ENST00000458118 728 ntBASIC0.34□□□□□ -2.36
SGCEO43556 SNORD65B-201ENST00000459126 73 ntBASIC0.34□□□□□ -2.36
SGCEO43556 CCDC34P1-201ENST00000507441 517 ntBASIC0.34□□□□□ -2.36
SGCEO43556 RNU4ATAC8P-201ENST00000516196 109 ntBASIC0.34□□□□□ -2.36
SGCEO43556 CPDP1-201ENST00000579660 283 ntBASIC0.34□□□□□ -2.36
SGCEO43556 AC087683.1-201ENST00000591187 441 ntBASIC0.34□□□□□ -2.36
SGCEO43556 7SK.10-201ENST00000621414 298 ntBASIC0.34□□□□□ -2.36
SGCEO43556 AC243829.3-201ENST00000622177 108 ntBASIC0.34□□□□□ -2.36
SGCEO43556 AC068137.4-201ENST00000638485 296 ntBASIC0.34□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms