Protein–RNA interactions for Protein: O15297

PPM1D, Protein phosphatase 1D, humanhuman

Predictions only

Length 605 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1DO15297 RNU6-461P-201ENST00000364195 107 ntBASIC2.58□□□□□ -2
PPM1DO15297 RNU6-234P-201ENST00000365229 104 ntBASIC2.58□□□□□ -2
PPM1DO15297 MIR627-201ENST00000384979 97 ntBASIC2.58□□□□□ -2
PPM1DO15297 MIR548B-201ENST00000385247 97 ntBASIC2.58□□□□□ -2
PPM1DO15297 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.58□□□□□ -2
PPM1DO15297 MIR300-201ENST00000401138 83 ntBASIC2.58□□□□□ -2
PPM1DO15297 RNU2-14P-201ENST00000411053 191 ntBASIC2.58□□□□□ -2
PPM1DO15297 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.58□□□□□ -2
PPM1DO15297 MTCO1P5-201ENST00000433573 344 ntBASIC2.58□□□□□ -2
PPM1DO15297 MRPS10P1-201ENST00000448483 130 ntBASIC2.58□□□□□ -2
PPM1DO15297 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC2.58□□□□□ -2
PPM1DO15297 AC023141.11-201ENST00000508864 202 ntBASIC2.58□□□□□ -2
PPM1DO15297 MIR449C-201ENST00000516047 92 ntBASIC2.58□□□□□ -2
PPM1DO15297 RNU4-71P-201ENST00000516258 113 ntBASIC2.58□□□□□ -2
PPM1DO15297 RNU6-155P-201ENST00000516347 100 ntBASIC2.58□□□□□ -2
PPM1DO15297 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.58□□□□□ -2
PPM1DO15297 MIR3605-201ENST00000583214 100 ntBASIC2.58□□□□□ -2
PPM1DO15297 AC009779.6-201ENST00000603972 165 ntBASIC2.58□□□□□ -2
PPM1DO15297 MIR6817-201ENST00000615588 66 ntBASIC2.58□□□□□ -2
PPM1DO15297 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC2.58□□□□□ -2
PPM1DO15297 AC010297.1-201ENST00000623948 149 ntBASIC2.58□□□□□ -2
PPM1DO15297 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.57□□□□□ -2
PPM1DO15297 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.57□□□□□ -2
PPM1DO15297 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.57□□□□□ -2
PPM1DO15297 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.57□□□□□ -2
PPM1DO15297 SNORA25.1-201ENST00000362326 128 ntBASIC2.57□□□□□ -2
PPM1DO15297 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.57□□□□□ -2
PPM1DO15297 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.57□□□□□ -2
PPM1DO15297 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.57□□□□□ -2
PPM1DO15297 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.57□□□□□ -2
PPM1DO15297 AL161788.1-201ENST00000441805 169 ntBASIC2.57□□□□□ -2
PPM1DO15297 AL139109.1-201ENST00000455491 297 ntBASIC2.57□□□□□ -2
PPM1DO15297 CYP2C59P-201ENST00000457790 269 ntBASIC2.57□□□□□ -2
PPM1DO15297 RNU7-14P-201ENST00000459331 62 ntBASIC2.57□□□□□ -2
PPM1DO15297 HMGN2P9-201ENST00000476875 229 ntBASIC2.57□□□□□ -2
PPM1DO15297 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC2.57□□□□□ -2
PPM1DO15297 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.57□□□□□ -2
PPM1DO15297 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.57□□□□□ -2
PPM1DO15297 RNA5SP148-201ENST00000516527 94 ntBASIC2.57□□□□□ -2
PPM1DO15297 AC109329.2-201ENST00000519658 482 ntBASIC2.57□□□□□ -2
PPM1DO15297 MIR3670-2-201ENST00000582974 65 ntBASIC2.57□□□□□ -2
PPM1DO15297 MIR3670-1-201ENST00000584160 65 ntBASIC2.57□□□□□ -2
PPM1DO15297 MIR3670-3-201ENST00000584855 65 ntBASIC2.57□□□□□ -2
PPM1DO15297 AL356280.1-201ENST00000603614 379 ntBASIC2.57□□□□□ -2
PPM1DO15297 MIR3670-4-201ENST00000612260 65 ntBASIC2.57□□□□□ -2
PPM1DO15297 AL442067.1-201ENST00000613261 223 ntBASIC2.57□□□□□ -2
PPM1DO15297 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.57□□□□□ -2
PPM1DO15297 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.56□□□□□ -2
PPM1DO15297 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
PPM1DO15297 RNU6-1305P-201ENST00000364353 104 ntBASIC2.56□□□□□ -2
PPM1DO15297 Z98949.2-201ENST00000440996 144 ntBASIC2.56□□□□□ -2
PPM1DO15297 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.56□□□□□ -2
PPM1DO15297 AC091959.1-201ENST00000495857 238 ntBASIC2.56□□□□□ -2
PPM1DO15297 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.56□□□□□ -2
PPM1DO15297 ATP5EP1-201ENST00000510257 156 ntBASIC2.56□□□□□ -2
PPM1DO15297 SNORA9.3-201ENST00000516383 129 ntBASIC2.56□□□□□ -2
PPM1DO15297 SNORA27.4-201ENST00000516650 95 ntBASIC2.56□□□□□ -2
PPM1DO15297 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC2.56□□□□□ -2
PPM1DO15297 AC006380.1-201ENST00000603598 186 ntBASIC2.56□□□□□ -2
PPM1DO15297 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.56□□□□□ -2
PPM1DO15297 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
PPM1DO15297 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
PPM1DO15297 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
PPM1DO15297 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.55□□□□□ -2
PPM1DO15297 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.55□□□□□ -2
PPM1DO15297 RNU6-545P-201ENST00000362681 104 ntBASIC2.55□□□□□ -2
PPM1DO15297 Y_RNA.65-201ENST00000362846 100 ntBASIC2.55□□□□□ -2
PPM1DO15297 Y_RNA.269-201ENST00000364685 89 ntBASIC2.55□□□□□ -2
PPM1DO15297 Y_RNA.275-201ENST00000364726 110 ntBASIC2.55□□□□□ -2
PPM1DO15297 RNU6-200P-201ENST00000364743 107 ntBASIC2.55□□□□□ -2
PPM1DO15297 RNA5SP240-201ENST00000365355 128 ntBASIC2.55□□□□□ -2
PPM1DO15297 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
PPM1DO15297 RNU6-514P-201ENST00000384208 107 ntBASIC2.55□□□□□ -2
PPM1DO15297 MT-TR-201ENST00000387439 65 ntBASIC2.55□□□□□ -2
PPM1DO15297 RNU6-220P-201ENST00000390919 107 ntBASIC2.55□□□□□ -2
PPM1DO15297 MIR1283-1-201ENST00000408494 87 ntBASIC2.55□□□□□ -2
PPM1DO15297 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.55□□□□□ -2
PPM1DO15297 SRIP1-201ENST00000489235 288 ntBASIC2.55□□□□□ -2
PPM1DO15297 SNORA48.11-201ENST00000517015 89 ntBASIC2.55□□□□□ -2
PPM1DO15297 MIR4446-201ENST00000578505 67 ntBASIC2.55□□□□□ -2
PPM1DO15297 MIR4635-201ENST00000583759 79 ntBASIC2.55□□□□□ -2
PPM1DO15297 AC104984.5-201ENST00000586878 94 ntBASIC2.55□□□□□ -2
PPM1DO15297 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC2.55□□□□□ -2
PPM1DO15297 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
PPM1DO15297 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
PPM1DO15297 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.54□□□□□ -2
PPM1DO15297 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
PPM1DO15297 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.54□□□□□ -2
PPM1DO15297 SNORD115-30-201ENST00000364117 82 ntBASIC2.54□□□□□ -2
PPM1DO15297 Y_RNA.243-201ENST00000364481 109 ntBASIC2.54□□□□□ -2
PPM1DO15297 RNU6-740P-201ENST00000364734 105 ntBASIC2.54□□□□□ -2
PPM1DO15297 SNORD31B-201ENST00000364977 69 ntBASIC2.54□□□□□ -2
PPM1DO15297 MIR1185-2-201ENST00000408687 86 ntBASIC2.54□□□□□ -2
PPM1DO15297 U3.40-201ENST00000408706 208 ntBASIC2.54□□□□□ -2
PPM1DO15297 RNU2-64P-201ENST00000411315 191 ntBASIC2.54□□□□□ -2
PPM1DO15297 AL139156.1-201ENST00000412785 841 ntBASIC2.54□□□□□ -2
PPM1DO15297 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC2.54□□□□□ -2
PPM1DO15297 AC092427.1-202ENST00000430569 476 ntBASIC2.54□□□□□ -2
PPM1DO15297 AL513328.1-201ENST00000446460 224 ntBASIC2.54□□□□□ -2
PPM1DO15297 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 255.3 ms