Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.73□□□□□ -1.97
TRIM38O00635 MIR3605-201ENST00000583214 100 ntBASIC2.73□□□□□ -1.97
TRIM38O00635 AC010928.2-201ENST00000588017 287 ntBASIC2.73□□□□□ -1.97
TRIM38O00635 AL355297.2-201ENST00000604792 129 ntBASIC2.73□□□□□ -1.97
TRIM38O00635 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.73□□□□□ -1.97
TRIM38O00635 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
TRIM38O00635 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.72□□□□□ -1.97
TRIM38O00635 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
TRIM38O00635 RNU6-859P-201ENST00000362728 107 ntBASIC2.72□□□□□ -1.97
TRIM38O00635 Y_RNA.275-201ENST00000364726 110 ntBASIC2.72□□□□□ -1.97
TRIM38O00635 RNU6-923P-201ENST00000364753 107 ntBASIC2.72□□□□□ -1.97
TRIM38O00635 Y_RNA.304-201ENST00000365011 112 ntBASIC2.72□□□□□ -1.97
TRIM38O00635 RNU6-326P-201ENST00000365480 107 ntBASIC2.72□□□□□ -1.97
TRIM38O00635 RNU6-318P-201ENST00000384283 103 ntBASIC2.72□□□□□ -1.97
TRIM38O00635 RNU6-1117P-201ENST00000384525 104 ntBASIC2.72□□□□□ -1.97
TRIM38O00635 SNORA46.1-201ENST00000391069 153 ntBASIC2.72□□□□□ -1.97
TRIM38O00635 RNU2-51P-201ENST00000410708 197 ntBASIC2.72□□□□□ -1.97
TRIM38O00635 RNU7-26P-201ENST00000458980 63 ntBASIC2.72□□□□□ -1.97
TRIM38O00635 RNU6-1219P-201ENST00000516143 112 ntBASIC2.72□□□□□ -1.97
TRIM38O00635 RNU2-31P-201ENST00000516954 155 ntBASIC2.72□□□□□ -1.97
TRIM38O00635 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.72□□□□□ -1.97
TRIM38O00635 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.71□□□□□ -1.98
TRIM38O00635 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.71□□□□□ -1.98
TRIM38O00635 Y_RNA.418-201ENST00000384029 102 ntBASIC2.71□□□□□ -1.98
TRIM38O00635 RNU6-22P-201ENST00000384355 107 ntBASIC2.71□□□□□ -1.98
TRIM38O00635 MIR9-1-201ENST00000385198 89 ntBASIC2.71□□□□□ -1.98
TRIM38O00635 MIR561-201ENST00000385216 97 ntBASIC2.71□□□□□ -1.98
TRIM38O00635 SNORA53-201ENST00000391141 249 ntBASIC2.71□□□□□ -1.98
TRIM38O00635 HMGN2P35-201ENST00000412164 270 ntBASIC2.71□□□□□ -1.98
TRIM38O00635 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.71□□□□□ -1.98
TRIM38O00635 AC087477.1-201ENST00000465747 340 ntBASIC2.71□□□□□ -1.98
TRIM38O00635 AC003982.1-202ENST00000469928 248 ntBASIC2.71□□□□□ -1.98
TRIM38O00635 RPL23AP75-201ENST00000491601 451 ntBASIC2.71□□□□□ -1.98
TRIM38O00635 AF186996.7-201ENST00000492781 209 ntBASIC2.71□□□□□ -1.98
TRIM38O00635 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.71□□□□□ -1.98
TRIM38O00635 AC004486.1-201ENST00000546846 233 ntBASIC2.71□□□□□ -1.98
TRIM38O00635 AC091544.4-201ENST00000555268 342 ntBASIC2.71□□□□□ -1.98
TRIM38O00635 MIR4308-201ENST00000580634 81 ntBASIC2.71□□□□□ -1.98
TRIM38O00635 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.71□□□□□ -1.98
TRIM38O00635 MIR3670-2-201ENST00000582974 65 ntBASIC2.71□□□□□ -1.98
TRIM38O00635 MIR3670-1-201ENST00000584160 65 ntBASIC2.71□□□□□ -1.98
TRIM38O00635 MIR3670-3-201ENST00000584855 65 ntBASIC2.71□□□□□ -1.98
TRIM38O00635 MIR3670-4-201ENST00000612260 65 ntBASIC2.71□□□□□ -1.98
TRIM38O00635 PCGEM1.1-201ENST00000613431 131 ntBASIC2.71□□□□□ -1.98
TRIM38O00635 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.71□□□□□ -1.98
TRIM38O00635 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
TRIM38O00635 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.71□□□□□ -1.98
TRIM38O00635 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.71□□□□□ -1.98
TRIM38O00635 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
TRIM38O00635 AC092593.1-201ENST00000515413 1815 ntBASIC2.7□□□□□ -1.98
TRIM38O00635 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
TRIM38O00635 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.7□□□□□ -1.98
TRIM38O00635 U3.9-201ENST00000363823 204 ntBASIC2.7□□□□□ -1.98
TRIM38O00635 SNORD32B-201ENST00000364460 84 ntBASIC2.7□□□□□ -1.98
TRIM38O00635 RNU6-1072P-201ENST00000384703 107 ntBASIC2.7□□□□□ -1.98
TRIM38O00635 RNU6-443P-201ENST00000384780 107 ntBASIC2.7□□□□□ -1.98
TRIM38O00635 Y_RNA.590-201ENST00000410140 107 ntBASIC2.7□□□□□ -1.98
TRIM38O00635 RNA5SP21-201ENST00000410917 96 ntBASIC2.7□□□□□ -1.98
TRIM38O00635 RNU2-61P-201ENST00000411069 191 ntBASIC2.7□□□□□ -1.98
TRIM38O00635 RNU5E-9P-201ENST00000411164 104 ntBASIC2.7□□□□□ -1.98
TRIM38O00635 AC112220.1-201ENST00000434628 355 ntBASIC2.7□□□□□ -1.98
TRIM38O00635 AP000705.1-201ENST00000454567 350 ntBASIC2.7□□□□□ -1.98
TRIM38O00635 Y_RNA.638-201ENST00000459374 113 ntBASIC2.7□□□□□ -1.98
TRIM38O00635 RPL17P51-201ENST00000605218 238 ntBASIC2.7□□□□□ -1.98
TRIM38O00635 SNORD113-5-201ENST00000607261 78 ntBASIC2.7□□□□□ -1.98
TRIM38O00635 RMST_6.1-201ENST00000611980 203 ntBASIC2.7□□□□□ -1.98
TRIM38O00635 RNA5SP361-201ENST00000362686 118 ntBASIC2.69□□□□□ -1.98
TRIM38O00635 Y_RNA.82-201ENST00000363000 102 ntBASIC2.69□□□□□ -1.98
TRIM38O00635 Y_RNA.92-201ENST00000363043 102 ntBASIC2.69□□□□□ -1.98
TRIM38O00635 SNORA38-201ENST00000363946 132 ntBASIC2.69□□□□□ -1.98
TRIM38O00635 Y_RNA.235-201ENST00000364412 102 ntBASIC2.69□□□□□ -1.98
TRIM38O00635 Y_RNA.306-201ENST00000365015 102 ntBASIC2.69□□□□□ -1.98
TRIM38O00635 Y_RNA.312-201ENST00000365089 102 ntBASIC2.69□□□□□ -1.98
TRIM38O00635 Y_RNA.322-201ENST00000365151 102 ntBASIC2.69□□□□□ -1.98
TRIM38O00635 RNU6-1130P-201ENST00000365434 107 ntBASIC2.69□□□□□ -1.98
TRIM38O00635 Y_RNA.446-201ENST00000384178 104 ntBASIC2.69□□□□□ -1.98
TRIM38O00635 Y_RNA.569-201ENST00000384749 103 ntBASIC2.69□□□□□ -1.98
TRIM38O00635 RNA5SP213-201ENST00000391031 106 ntBASIC2.69□□□□□ -1.98
TRIM38O00635 MIR208B-201ENST00000401172 77 ntBASIC2.69□□□□□ -1.98
TRIM38O00635 AL139095.1-201ENST00000404326 391 ntBASIC2.69□□□□□ -1.98
TRIM38O00635 RNA5SP508-201ENST00000411327 119 ntBASIC2.69□□□□□ -1.98
TRIM38O00635 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC2.69□□□□□ -1.98
TRIM38O00635 snoU13.30-201ENST00000458951 104 ntBASIC2.69□□□□□ -1.98
TRIM38O00635 Y_RNA.650-201ENST00000459002 102 ntBASIC2.69□□□□□ -1.98
TRIM38O00635 RPL26P26-201ENST00000480251 434 ntBASIC2.69□□□□□ -1.98
TRIM38O00635 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC2.69□□□□□ -1.98
TRIM38O00635 Y_RNA.777-201ENST00000516982 102 ntBASIC2.69□□□□□ -1.98
TRIM38O00635 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
TRIM38O00635 EIF4A1P12-201ENST00000551910 141 ntBASIC2.69□□□□□ -1.98
TRIM38O00635 AC027288.2-201ENST00000553028 243 ntBASIC2.69□□□□□ -1.98
TRIM38O00635 MIR4423-201ENST00000580922 80 ntBASIC2.69□□□□□ -1.98
TRIM38O00635 Y_RNA.771-201ENST00000598668 102 ntBASIC2.69□□□□□ -1.98
TRIM38O00635 Y_RNA.789-201ENST00000622480 102 ntBASIC2.69□□□□□ -1.98
TRIM38O00635 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.69□□□□□ -1.98
TRIM38O00635 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
TRIM38O00635 MIR26A1-201ENST00000362205 77 ntBASIC2.68□□□□□ -1.98
TRIM38O00635 RNA5SP68-201ENST00000363885 119 ntBASIC2.68□□□□□ -1.98
TRIM38O00635 RNU6-17P-201ENST00000384245 107 ntBASIC2.68□□□□□ -1.98
TRIM38O00635 RNU6-18P-201ENST00000384527 107 ntBASIC2.68□□□□□ -1.98
TRIM38O00635 RNU6-959P-201ENST00000384671 107 ntBASIC2.68□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms