Protein–RNA interactions for Protein: O00555

CACNA1A, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, humanhuman

Predictions only

Length 2,505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1AO00555 AK6P2-201ENST00000549020 471 ntBASIC-0.19□□□□□ -2.44
CACNA1AO00555 EIF1AXP2-201ENST00000555940 413 ntBASIC-0.19□□□□□ -2.44
CACNA1AO00555 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC-0.19□□□□□ -2.44
CACNA1AO00555 AC122134.1-202ENST00000569111 1201 ntBASIC-0.19□□□□□ -2.44
CACNA1AO00555 MIR4300-201ENST00000581016 96 ntBASIC-0.19□□□□□ -2.44
CACNA1AO00555 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC-0.19□□□□□ -2.44
CACNA1AO00555 AL139418.1-201ENST00000613613 177 ntBASIC-0.19□□□□□ -2.44
CACNA1AO00555 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC-0.19□□□□□ -2.44
CACNA1AO00555 MTND5P42-201ENST00000637720 498 ntBASIC-0.19□□□□□ -2.44
CACNA1AO00555 MIR4788-201ENST00000639104 80 ntBASIC-0.19□□□□□ -2.44
CACNA1AO00555 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC-0.19□□□□□ -2.44
CACNA1AO00555 RNU6-161P-201ENST00000363051 106 ntBASIC-0.19□□□□□ -2.44
CACNA1AO00555 RNA5SP517-201ENST00000364724 117 ntBASIC-0.19□□□□□ -2.44
CACNA1AO00555 RNU6-756P-201ENST00000383997 107 ntBASIC-0.19□□□□□ -2.44
CACNA1AO00555 RNU6-481P-201ENST00000384194 107 ntBASIC-0.19□□□□□ -2.44
CACNA1AO00555 MIR106A-201ENST00000384870 81 ntBASIC-0.19□□□□□ -2.44
CACNA1AO00555 MIR643-201ENST00000385267 97 ntBASIC-0.19□□□□□ -2.44
CACNA1AO00555 SNORD41-201ENST00000386967 70 ntBASIC-0.19□□□□□ -2.44
CACNA1AO00555 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC-0.19□□□□□ -2.44
CACNA1AO00555 RNU2-3P-201ENST00000410144 191 ntBASIC-0.19□□□□□ -2.44
CACNA1AO00555 AC004866.1-201ENST00000411748 78 ntBASIC-0.19□□□□□ -2.44
CACNA1AO00555 AL133396.1-201ENST00000432048 687 ntBASIC-0.19□□□□□ -2.44
CACNA1AO00555 ZNF736P5Y-201ENST00000451173 805 ntBASIC-0.19□□□□□ -2.44
CACNA1AO00555 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC-0.19□□□□□ -2.44
CACNA1AO00555 HMGN2P26-201ENST00000463169 339 ntBASIC-0.19□□□□□ -2.44
CACNA1AO00555 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC-0.19□□□□□ -2.44
CACNA1AO00555 RNU6-983P-201ENST00000516004 103 ntBASIC-0.19□□□□□ -2.44
CACNA1AO00555 SNORA70.12-201ENST00000516084 153 ntBASIC-0.19□□□□□ -2.44
CACNA1AO00555 RNU6-320P-201ENST00000516511 106 ntBASIC-0.19□□□□□ -2.44
CACNA1AO00555 AC022616.3-201ENST00000523940 148 ntBASIC-0.19□□□□□ -2.44
CACNA1AO00555 DEFB131C-201ENST00000528817 165 ntBASIC-0.19□□□□□ -2.44
CACNA1AO00555 SLC2A13P1-201ENST00000531560 322 ntBASIC-0.19□□□□□ -2.44
CACNA1AO00555 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC-0.19□□□□□ -2.44
CACNA1AO00555 AC023827.1-201ENST00000569247 97 ntBASIC-0.19□□□□□ -2.44
CACNA1AO00555 AC010525.2-201ENST00000590920 195 ntBASIC-0.19□□□□□ -2.44
CACNA1AO00555 AL356596.1-201ENST00000624230 379 ntBASIC-0.19□□□□□ -2.44
CACNA1AO00555 AL391099.1-201ENST00000624635 187 ntBASIC-0.19□□□□□ -2.44
CACNA1AO00555 RNU4-84P-201ENST00000364200 139 ntBASIC-0.2□□□□□ -2.44
CACNA1AO00555 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC-0.2□□□□□ -2.44
CACNA1AO00555 RNU6-1179P-201ENST00000384667 107 ntBASIC-0.2□□□□□ -2.44
CACNA1AO00555 RNU6-269P-201ENST00000391077 97 ntBASIC-0.2□□□□□ -2.44
CACNA1AO00555 RNU6-796P-201ENST00000391086 107 ntBASIC-0.2□□□□□ -2.44
CACNA1AO00555 U8.16-201ENST00000391279 133 ntBASIC-0.2□□□□□ -2.44
CACNA1AO00555 SNORD111-201ENST00000408139 94 ntBASIC-0.2□□□□□ -2.44
CACNA1AO00555 MIR320C1-201ENST00000408566 88 ntBASIC-0.2□□□□□ -2.44
CACNA1AO00555 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC-0.2□□□□□ -2.44
CACNA1AO00555 MTATP6P16-201ENST00000434543 526 ntBASIC-0.2□□□□□ -2.44
CACNA1AO00555 RNU7-14P-201ENST00000459331 62 ntBASIC-0.2□□□□□ -2.44
CACNA1AO00555 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC-0.2□□□□□ -2.44
CACNA1AO00555 RNU6-848P-201ENST00000515948 107 ntBASIC-0.2□□□□□ -2.44
CACNA1AO00555 RNU6-475P-201ENST00000516073 104 ntBASIC-0.2□□□□□ -2.44
CACNA1AO00555 RNU6-1278P-201ENST00000516130 107 ntBASIC-0.2□□□□□ -2.44
CACNA1AO00555 RNU6-617P-201ENST00000516147 107 ntBASIC-0.2□□□□□ -2.44
CACNA1AO00555 RNU6-473P-201ENST00000516164 107 ntBASIC-0.2□□□□□ -2.44
CACNA1AO00555 RNU6-1049P-201ENST00000516414 107 ntBASIC-0.2□□□□□ -2.44
CACNA1AO00555 SNORA31.10-201ENST00000516482 106 ntBASIC-0.2□□□□□ -2.44
CACNA1AO00555 RNU6-1261P-201ENST00000517194 104 ntBASIC-0.2□□□□□ -2.44
CACNA1AO00555 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC-0.2□□□□□ -2.44
CACNA1AO00555 MIR4778-201ENST00000577635 80 ntBASIC-0.2□□□□□ -2.44
CACNA1AO00555 MIR4743-201ENST00000584576 69 ntBASIC-0.2□□□□□ -2.44
CACNA1AO00555 AL138889.2-201ENST00000603883 242 ntBASIC-0.2□□□□□ -2.44
CACNA1AO00555 AC012467.1-201ENST00000607740 256 ntBASIC-0.2□□□□□ -2.44
CACNA1AO00555 SNORD114-11-201ENST00000363738 75 ntBASIC-0.2□□□□□ -2.44
CACNA1AO00555 Y_RNA.362-201ENST00000365518 110 ntBASIC-0.2□□□□□ -2.44
CACNA1AO00555 MIR558-201ENST00000384920 94 ntBASIC-0.2□□□□□ -2.44
CACNA1AO00555 SSR1P2-201ENST00000415208 787 ntBASIC-0.2□□□□□ -2.44
CACNA1AO00555 DEFB130D-201ENST00000426866 237 ntBASIC-0.2□□□□□ -2.44
CACNA1AO00555 MRPS10P2-201ENST00000431226 381 ntBASIC-0.2□□□□□ -2.44
CACNA1AO00555 MTCO3P43-201ENST00000440974 771 ntBASIC-0.2□□□□□ -2.44
CACNA1AO00555 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC-0.2□□□□□ -2.44
CACNA1AO00555 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC-0.2□□□□□ -2.44
CACNA1AO00555 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC-0.2□□□□□ -2.44
CACNA1AO00555 AL139824.2-201ENST00000458731 1095 ntBASIC-0.2□□□□□ -2.44
CACNA1AO00555 SCARNA18-201ENST00000459004 134 ntBASIC-0.2□□□□□ -2.44
CACNA1AO00555 MIR4293-201ENST00000584305 78 ntBASIC-0.2□□□□□ -2.44
CACNA1AO00555 AC090186.1-201ENST00000605991 572 ntBASIC-0.2□□□□□ -2.44
CACNA1AO00555 AL354696.1-201ENST00000614652 497 ntBASIC-0.2□□□□□ -2.44
CACNA1AO00555 FER-210ENST00000628534 558 ntTSL 5 BASIC-0.2□□□□□ -2.44
CACNA1AO00555 AL450472.1-202ENST00000637286 180 ntBASIC-0.2□□□□□ -2.44
CACNA1AO00555 Y_RNA.13-201ENST00000362403 112 ntBASIC-0.21□□□□□ -2.44
CACNA1AO00555 U3.4-201ENST00000363352 213 ntBASIC-0.21□□□□□ -2.44
CACNA1AO00555 RNU6-1285P-201ENST00000363480 105 ntBASIC-0.21□□□□□ -2.44
CACNA1AO00555 RNA5SP48-201ENST00000363969 126 ntBASIC-0.21□□□□□ -2.44
CACNA1AO00555 RNU6-777P-201ENST00000364265 104 ntBASIC-0.21□□□□□ -2.44
CACNA1AO00555 RNU6-127P-201ENST00000390897 107 ntBASIC-0.21□□□□□ -2.44
CACNA1AO00555 MIR1253-201ENST00000408273 105 ntBASIC-0.21□□□□□ -2.44
CACNA1AO00555 MTCO1P20-201ENST00000425366 358 ntBASIC-0.21□□□□□ -2.44
CACNA1AO00555 TIMM9P3-201ENST00000428659 274 ntBASIC-0.21□□□□□ -2.44
CACNA1AO00555 NDUFB1P2-201ENST00000449477 176 ntBASIC-0.21□□□□□ -2.44
CACNA1AO00555 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC-0.21□□□□□ -2.44
CACNA1AO00555 HSFY5P-201ENST00000453726 309 ntBASIC-0.21□□□□□ -2.44
CACNA1AO00555 AC091885.1-201ENST00000506658 268 ntBASIC-0.21□□□□□ -2.44
CACNA1AO00555 SUMO2P5-201ENST00000506790 245 ntBASIC-0.21□□□□□ -2.44
CACNA1AO00555 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC-0.21□□□□□ -2.44
CACNA1AO00555 RNY4P37-201ENST00000516225 96 ntBASIC-0.21□□□□□ -2.44
CACNA1AO00555 RNU6-448P-201ENST00000517052 107 ntBASIC-0.21□□□□□ -2.44
CACNA1AO00555 RNU6-64P-201ENST00000517119 105 ntBASIC-0.21□□□□□ -2.44
CACNA1AO00555 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC-0.21□□□□□ -2.44
CACNA1AO00555 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC-0.21□□□□□ -2.44
CACNA1AO00555 RPL21P9-201ENST00000556149 474 ntBASIC-0.21□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms