Protein–RNA interactions for Protein: B2RPK0

HMGB1P1, Putative high mobility group protein B1-like 1, humanhuman

Predicted RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1B2RPK0 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.53□□□□□ -2.16
HMGB1P1B2RPK0 RNU6-281P-201ENST00000384212 103 ntBASIC1.52□□□□□ -2.17
HMGB1P1B2RPK0 Z92545.1-201ENST00000411782 234 ntBASIC1.52□□□□□ -2.17
HMGB1P1B2RPK0 Z98742.3-201ENST00000418637 326 ntBASIC1.52□□□□□ -2.17
HMGB1P1B2RPK0 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC1.52□□□□□ -2.17
HMGB1P1B2RPK0 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.52□□□□□ -2.17
HMGB1P1B2RPK0 RNU7-87P-201ENST00000459343 62 ntBASIC1.52□□□□□ -2.17
HMGB1P1B2RPK0 RNU7-94P-201ENST00000459576 63 ntBASIC1.52□□□□□ -2.17
HMGB1P1B2RPK0 AC018710.1-201ENST00000506509 158 ntBASIC1.52□□□□□ -2.17
HMGB1P1B2RPK0 RNU6-1114P-201ENST00000516022 107 ntBASIC1.52□□□□□ -2.17
HMGB1P1B2RPK0 RNA5SP61-201ENST00000516453 100 ntBASIC1.52□□□□□ -2.17
HMGB1P1B2RPK0 MIR4790-201ENST00000577799 79 ntBASIC1.52□□□□□ -2.17
HMGB1P1B2RPK0 MIR4255-201ENST00000579351 72 ntBASIC1.52□□□□□ -2.17
HMGB1P1B2RPK0 AL513423.1-201ENST00000621695 132 ntBASIC1.52□□□□□ -2.17
HMGB1P1B2RPK0 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.52□□□□□ -2.17
HMGB1P1B2RPK0 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
HMGB1P1B2RPK0 Y_RNA.265-201ENST00000364677 108 ntBASIC1.51□□□□□ -2.17
HMGB1P1B2RPK0 Y_RNA.267-201ENST00000364679 109 ntBASIC1.51□□□□□ -2.17
HMGB1P1B2RPK0 RNU6-407P-201ENST00000365280 104 ntBASIC1.51□□□□□ -2.17
HMGB1P1B2RPK0 MIR660-201ENST00000385235 97 ntBASIC1.51□□□□□ -2.17
HMGB1P1B2RPK0 AL355796.1-201ENST00000406706 323 ntBASIC1.51□□□□□ -2.17
HMGB1P1B2RPK0 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.51□□□□□ -2.17
HMGB1P1B2RPK0 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC1.51□□□□□ -2.17
HMGB1P1B2RPK0 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC1.51□□□□□ -2.17
HMGB1P1B2RPK0 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.51□□□□□ -2.17
HMGB1P1B2RPK0 AC008549.1-201ENST00000512900 643 ntBASIC1.51□□□□□ -2.17
HMGB1P1B2RPK0 RNU4-49P-201ENST00000516080 140 ntBASIC1.51□□□□□ -2.17
HMGB1P1B2RPK0 RNU6-250P-201ENST00000516958 103 ntBASIC1.51□□□□□ -2.17
HMGB1P1B2RPK0 RNU7-172P-201ENST00000517125 64 ntBASIC1.51□□□□□ -2.17
HMGB1P1B2RPK0 BX248123.2-201ENST00000606318 124 ntBASIC1.51□□□□□ -2.17
HMGB1P1B2RPK0 AC100812.1-201ENST00000607622 580 ntBASIC1.51□□□□□ -2.17
HMGB1P1B2RPK0 MIR6079-201ENST00000635807 62 ntBASIC1.51□□□□□ -2.17
HMGB1P1B2RPK0 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
HMGB1P1B2RPK0 Y_RNA.3-201ENST00000362331 103 ntBASIC1.5□□□□□ -2.17
HMGB1P1B2RPK0 SNORD115-47-201ENST00000391226 86 ntBASIC1.5□□□□□ -2.17
HMGB1P1B2RPK0 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC1.5□□□□□ -2.17
HMGB1P1B2RPK0 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC1.5□□□□□ -2.17
HMGB1P1B2RPK0 CALM2P4-201ENST00000430810 426 ntBASIC1.5□□□□□ -2.17
HMGB1P1B2RPK0 AC093850.1-201ENST00000454121 251 ntBASIC1.5□□□□□ -2.17
HMGB1P1B2RPK0 AC092989.1-201ENST00000481235 277 ntBASIC1.5□□□□□ -2.17
HMGB1P1B2RPK0 AC010598.1-201ENST00000510378 103 ntBASIC1.5□□□□□ -2.17
HMGB1P1B2RPK0 Y_RNA.682-201ENST00000516457 100 ntBASIC1.5□□□□□ -2.17
HMGB1P1B2RPK0 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.5□□□□□ -2.17
HMGB1P1B2RPK0 AC006026.1-201ENST00000444025 1803 ntBASIC1.5□□□□□ -2.17
HMGB1P1B2RPK0 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
HMGB1P1B2RPK0 RNU6-457P-201ENST00000363999 107 ntBASIC1.49□□□□□ -2.17
HMGB1P1B2RPK0 RNU6-596P-201ENST00000365395 98 ntBASIC1.49□□□□□ -2.17
HMGB1P1B2RPK0 SNORA20B-201ENST00000384220 132 ntBASIC1.49□□□□□ -2.17
HMGB1P1B2RPK0 Y_RNA.453-201ENST00000384223 109 ntBASIC1.49□□□□□ -2.17
HMGB1P1B2RPK0 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.49□□□□□ -2.17
HMGB1P1B2RPK0 UQCRBP2-201ENST00000447827 297 ntBASIC1.49□□□□□ -2.17
HMGB1P1B2RPK0 MTND1P17-201ENST00000448961 204 ntBASIC1.49□□□□□ -2.17
HMGB1P1B2RPK0 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.49□□□□□ -2.17
HMGB1P1B2RPK0 AC116337.1-201ENST00000509680 687 ntBASIC1.49□□□□□ -2.17
HMGB1P1B2RPK0 SNORA31.2-201ENST00000516019 134 ntBASIC1.49□□□□□ -2.17
HMGB1P1B2RPK0 RNA5SP168-201ENST00000516642 112 ntBASIC1.49□□□□□ -2.17
HMGB1P1B2RPK0 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC1.49□□□□□ -2.17
HMGB1P1B2RPK0 MIR502-201ENST00000606349 86 ntBASIC1.49□□□□□ -2.17
HMGB1P1B2RPK0 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
HMGB1P1B2RPK0 Y_RNA.573-201ENST00000384763 105 ntBASIC1.48□□□□□ -2.17
HMGB1P1B2RPK0 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
HMGB1P1B2RPK0 AC091021.1-201ENST00000468051 388 ntBASIC1.48□□□□□ -2.17
HMGB1P1B2RPK0 AC048334.1-201ENST00000477975 159 ntBASIC1.48□□□□□ -2.17
HMGB1P1B2RPK0 AC097462.1-201ENST00000514125 324 ntBASIC1.48□□□□□ -2.17
HMGB1P1B2RPK0 SNORA70.22-201ENST00000517160 124 ntBASIC1.48□□□□□ -2.17
HMGB1P1B2RPK0 CYCSP23-201ENST00000519781 313 ntBASIC1.48□□□□□ -2.17
HMGB1P1B2RPK0 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.48□□□□□ -2.17
HMGB1P1B2RPK0 AC027335.2-201ENST00000624030 375 ntBASIC1.48□□□□□ -2.17
HMGB1P1B2RPK0 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.48□□□□□ -2.17
HMGB1P1B2RPK0 MIR483-201ENST00000385070 76 ntBASIC1.47□□□□□ -2.17
HMGB1P1B2RPK0 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
HMGB1P1B2RPK0 RNU2-56P-201ENST00000516826 190 ntBASIC1.47□□□□□ -2.17
HMGB1P1B2RPK0 AC125232.2-201ENST00000592457 143 ntBASIC1.47□□□□□ -2.17
HMGB1P1B2RPK0 AL162424.1-201ENST00000602325 221 ntBASIC1.47□□□□□ -2.17
HMGB1P1B2RPK0 AL357075.2-201ENST00000614906 189 ntBASIC1.47□□□□□ -2.17
HMGB1P1B2RPK0 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
HMGB1P1B2RPK0 Y_RNA.2-201ENST00000362330 96 ntBASIC1.46□□□□□ -2.18
HMGB1P1B2RPK0 RNU1-22P-201ENST00000363334 158 ntBASIC1.46□□□□□ -2.18
HMGB1P1B2RPK0 Y_RNA.157-201ENST00000363638 102 ntBASIC1.46□□□□□ -2.18
HMGB1P1B2RPK0 Y_RNA.301-201ENST00000364990 103 ntBASIC1.46□□□□□ -2.18
HMGB1P1B2RPK0 Y_RNA.516-201ENST00000384541 124 ntBASIC1.46□□□□□ -2.18
HMGB1P1B2RPK0 RNU6-910P-201ENST00000390844 107 ntBASIC1.46□□□□□ -2.18
HMGB1P1B2RPK0 SNORA40.18-201ENST00000391200 128 ntBASIC1.46□□□□□ -2.18
HMGB1P1B2RPK0 U8.16-201ENST00000391279 133 ntBASIC1.46□□□□□ -2.18
HMGB1P1B2RPK0 RNU1-139P-201ENST00000391307 165 ntBASIC1.46□□□□□ -2.18
HMGB1P1B2RPK0 Y_RNA.595-201ENST00000410403 105 ntBASIC1.46□□□□□ -2.18
HMGB1P1B2RPK0 AL139396.1-201ENST00000421137 167 ntBASIC1.46□□□□□ -2.18
HMGB1P1B2RPK0 AL353997.1-201ENST00000432936 108 ntBASIC1.46□□□□□ -2.18
HMGB1P1B2RPK0 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC1.46□□□□□ -2.18
HMGB1P1B2RPK0 AC105758.1-201ENST00000506038 399 ntBASIC1.46□□□□□ -2.18
HMGB1P1B2RPK0 AC046134.1-201ENST00000514454 666 ntBASIC1.46□□□□□ -2.18
HMGB1P1B2RPK0 RPL21P9-201ENST00000556149 474 ntBASIC1.46□□□□□ -2.18
HMGB1P1B2RPK0 AC080078.2-201ENST00000603766 501 ntBASIC1.46□□□□□ -2.18
HMGB1P1B2RPK0 AL513534.2-201ENST00000603836 250 ntBASIC1.46□□□□□ -2.18
HMGB1P1B2RPK0 SNORA28-201ENST00000606769 126 ntBASIC1.46□□□□□ -2.18
HMGB1P1B2RPK0 AC068137.4-201ENST00000638485 296 ntBASIC1.46□□□□□ -2.18
HMGB1P1B2RPK0 AC005592.1-201ENST00000566527 1640 ntBASIC1.45□□□□□ -2.18
HMGB1P1B2RPK0 RNA5SP361-201ENST00000362686 118 ntBASIC1.45□□□□□ -2.18
HMGB1P1B2RPK0 RNU6-199P-201ENST00000362954 107 ntBASIC1.45□□□□□ -2.18
HMGB1P1B2RPK0 Y_RNA.318-201ENST00000365131 97 ntBASIC1.45□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 116.5 ms