Protein–RNA interactions for Protein: Q9Y5H9

PCDHA2, Protocadherin alpha-2, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA2Q9Y5H9 RNU6-918P-201ENST00000391219 106 ntBASIC3.18□□□□□ -1.9
PCDHA2Q9Y5H9 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC3.18□□□□□ -1.9
PCDHA2Q9Y5H9 MICF-203ENST00000432679 129 ntBASIC3.18□□□□□ -1.9
PCDHA2Q9Y5H9 AC009969.1-201ENST00000438726 172 ntBASIC3.18□□□□□ -1.9
PCDHA2Q9Y5H9 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
PCDHA2Q9Y5H9 RNU6-861P-201ENST00000516745 106 ntBASIC3.18□□□□□ -1.9
PCDHA2Q9Y5H9 AP005660.1-201ENST00000522972 293 ntBASIC3.18□□□□□ -1.9
PCDHA2Q9Y5H9 AC087441.2-201ENST00000529141 262 ntBASIC3.18□□□□□ -1.9
PCDHA2Q9Y5H9 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC3.18□□□□□ -1.9
PCDHA2Q9Y5H9 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC3.18□□□□□ -1.9
PCDHA2Q9Y5H9 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
PCDHA2Q9Y5H9 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
PCDHA2Q9Y5H9 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
PCDHA2Q9Y5H9 RNU1-72P-201ENST00000362976 153 ntBASIC3.17□□□□□ -1.9
PCDHA2Q9Y5H9 RNU6-324P-201ENST00000363957 106 ntBASIC3.17□□□□□ -1.9
PCDHA2Q9Y5H9 MIR548B-201ENST00000385247 97 ntBASIC3.17□□□□□ -1.9
PCDHA2Q9Y5H9 AC024067.1-201ENST00000426199 223 ntBASIC3.17□□□□□ -1.9
PCDHA2Q9Y5H9 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC3.17□□□□□ -1.9
PCDHA2Q9Y5H9 AC140059.1-201ENST00000489238 361 ntBASIC3.17□□□□□ -1.9
PCDHA2Q9Y5H9 RNU6-1098P-201ENST00000516772 96 ntBASIC3.17□□□□□ -1.9
PCDHA2Q9Y5H9 RNU6-1212P-201ENST00000517023 104 ntBASIC3.17□□□□□ -1.9
PCDHA2Q9Y5H9 AC022559.1-201ENST00000520905 205 ntBASIC3.17□□□□□ -1.9
PCDHA2Q9Y5H9 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
PCDHA2Q9Y5H9 MIR4319-201ENST00000577285 85 ntBASIC3.17□□□□□ -1.9
PCDHA2Q9Y5H9 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC3.17□□□□□ -1.9
PCDHA2Q9Y5H9 AC010620.2-201ENST00000600135 313 ntBASIC3.17□□□□□ -1.9
PCDHA2Q9Y5H9 AC090517.3-201ENST00000625170 141 ntBASIC3.17□□□□□ -1.9
PCDHA2Q9Y5H9 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
PCDHA2Q9Y5H9 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
PCDHA2Q9Y5H9 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
PCDHA2Q9Y5H9 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.16□□□□□ -1.9
PCDHA2Q9Y5H9 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
PCDHA2Q9Y5H9 AC062016.1-201ENST00000355719 319 ntBASIC3.16□□□□□ -1.9
PCDHA2Q9Y5H9 AL031003.1-201ENST00000404229 172 ntBASIC3.16□□□□□ -1.9
PCDHA2Q9Y5H9 RNU6-1328P-201ENST00000410938 106 ntBASIC3.16□□□□□ -1.9
PCDHA2Q9Y5H9 RNA5SP184-201ENST00000411071 108 ntBASIC3.16□□□□□ -1.9
PCDHA2Q9Y5H9 OOSP1P1-201ENST00000423265 274 ntBASIC3.16□□□□□ -1.9
PCDHA2Q9Y5H9 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.16□□□□□ -1.9
PCDHA2Q9Y5H9 AC108938.1-201ENST00000451204 136 ntBASIC3.16□□□□□ -1.9
PCDHA2Q9Y5H9 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC3.16□□□□□ -1.9
PCDHA2Q9Y5H9 RNY3P16-201ENST00000516338 101 ntBASIC3.16□□□□□ -1.9
PCDHA2Q9Y5H9 AC079600.2-201ENST00000550076 130 ntBASIC3.16□□□□□ -1.9
PCDHA2Q9Y5H9 AL008718.3-201ENST00000610217 321 ntBASIC3.16□□□□□ -1.9
PCDHA2Q9Y5H9 AL365265.1-201ENST00000621045 234 ntBASIC3.16□□□□□ -1.9
PCDHA2Q9Y5H9 SNORA50A-202ENST00000629536 136 ntBASIC3.16□□□□□ -1.9
PCDHA2Q9Y5H9 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
PCDHA2Q9Y5H9 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.9
PCDHA2Q9Y5H9 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC3.15□□□□□ -1.9
PCDHA2Q9Y5H9 RNU6-1305P-201ENST00000364353 104 ntBASIC3.15□□□□□ -1.91
PCDHA2Q9Y5H9 Y_RNA.233-201ENST00000364407 101 ntBASIC3.15□□□□□ -1.91
PCDHA2Q9Y5H9 Y_RNA.262-201ENST00000364641 102 ntBASIC3.15□□□□□ -1.91
PCDHA2Q9Y5H9 RNU6-923P-201ENST00000364753 107 ntBASIC3.15□□□□□ -1.91
PCDHA2Q9Y5H9 MIR181A2-201ENST00000384863 110 ntBASIC3.15□□□□□ -1.91
PCDHA2Q9Y5H9 MIR512-1-201ENST00000384913 84 ntBASIC3.15□□□□□ -1.91
PCDHA2Q9Y5H9 BTF3P11-201ENST00000426582 477 ntBASIC3.15□□□□□ -1.91
PCDHA2Q9Y5H9 AC244505.4-201ENST00000434905 287 ntBASIC3.15□□□□□ -1.91
PCDHA2Q9Y5H9 SSXP5-201ENST00000443473 287 ntBASIC3.15□□□□□ -1.91
PCDHA2Q9Y5H9 Y_RNA.637-201ENST00000459424 114 ntBASIC3.15□□□□□ -1.91
PCDHA2Q9Y5H9 SRIP1-201ENST00000489235 288 ntBASIC3.15□□□□□ -1.91
PCDHA2Q9Y5H9 AC092185.1-201ENST00000491371 97 ntBASIC3.15□□□□□ -1.91
PCDHA2Q9Y5H9 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC3.15□□□□□ -1.91
PCDHA2Q9Y5H9 RNU5F-4P-201ENST00000516581 114 ntBASIC3.15□□□□□ -1.91
PCDHA2Q9Y5H9 AC009127.3-201ENST00000570531 403 ntBASIC3.15□□□□□ -1.91
PCDHA2Q9Y5H9 MIR5692C2-201ENST00000577959 77 ntBASIC3.15□□□□□ -1.91
PCDHA2Q9Y5H9 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.15□□□□□ -1.91
PCDHA2Q9Y5H9 AL713866.2-201ENST00000603579 219 ntBASIC3.15□□□□□ -1.91
PCDHA2Q9Y5H9 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC3.15□□□□□ -1.91
PCDHA2Q9Y5H9 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
PCDHA2Q9Y5H9 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
PCDHA2Q9Y5H9 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
PCDHA2Q9Y5H9 AC010329.5-201ENST00000623497 2174 ntBASIC3.14□□□□□ -1.91
PCDHA2Q9Y5H9 RNU6-653P-201ENST00000363074 106 ntBASIC3.14□□□□□ -1.91
PCDHA2Q9Y5H9 SNORA51.4-201ENST00000364993 124 ntBASIC3.14□□□□□ -1.91
PCDHA2Q9Y5H9 Y_RNA.308-201ENST00000365043 101 ntBASIC3.14□□□□□ -1.91
PCDHA2Q9Y5H9 Y_RNA.361-201ENST00000365515 120 ntBASIC3.14□□□□□ -1.91
PCDHA2Q9Y5H9 RNU6-1027P-201ENST00000383998 107 ntBASIC3.14□□□□□ -1.91
PCDHA2Q9Y5H9 Y_RNA.435-201ENST00000384095 112 ntBASIC3.14□□□□□ -1.91
PCDHA2Q9Y5H9 RNU6-1274P-201ENST00000384557 107 ntBASIC3.14□□□□□ -1.91
PCDHA2Q9Y5H9 AL590004.2-201ENST00000404787 371 ntBASIC3.14□□□□□ -1.91
PCDHA2Q9Y5H9 RNU6ATAC19P-201ENST00000408096 110 ntBASIC3.14□□□□□ -1.91
PCDHA2Q9Y5H9 MIR1294-201ENST00000408503 142 ntBASIC3.14□□□□□ -1.91
PCDHA2Q9Y5H9 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.14□□□□□ -1.91
PCDHA2Q9Y5H9 HMGN2P9-201ENST00000476875 229 ntBASIC3.14□□□□□ -1.91
PCDHA2Q9Y5H9 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC3.14□□□□□ -1.91
PCDHA2Q9Y5H9 TRAPPC2P7-201ENST00000509650 231 ntBASIC3.14□□□□□ -1.91
PCDHA2Q9Y5H9 MIR4308-201ENST00000580634 81 ntBASIC3.14□□□□□ -1.91
PCDHA2Q9Y5H9 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC3.14□□□□□ -1.91
PCDHA2Q9Y5H9 U6.115-201ENST00000636045 103 ntBASIC3.14□□□□□ -1.91
PCDHA2Q9Y5H9 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
PCDHA2Q9Y5H9 RNU6-944P-201ENST00000364023 107 ntBASIC3.13□□□□□ -1.91
PCDHA2Q9Y5H9 RNU6-746P-201ENST00000384112 109 ntBASIC3.13□□□□□ -1.91
PCDHA2Q9Y5H9 MIR1185-2-201ENST00000408687 86 ntBASIC3.13□□□□□ -1.91
PCDHA2Q9Y5H9 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
PCDHA2Q9Y5H9 AC063976.3-201ENST00000426849 329 ntBASIC3.13□□□□□ -1.91
PCDHA2Q9Y5H9 RPL30P4-201ENST00000429309 333 ntBASIC3.13□□□□□ -1.91
PCDHA2Q9Y5H9 AC003982.1-202ENST00000469928 248 ntBASIC3.13□□□□□ -1.91
PCDHA2Q9Y5H9 AC074198.2-201ENST00000508153 258 ntBASIC3.13□□□□□ -1.91
PCDHA2Q9Y5H9 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC3.13□□□□□ -1.91
PCDHA2Q9Y5H9 RNU6-255P-201ENST00000516957 105 ntBASIC3.13□□□□□ -1.91
PCDHA2Q9Y5H9 AC136628.3-201ENST00000521868 290 ntBASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 310.8 ms