Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC3.12□□□□□ -1.91
CTDP1Q9Y5B0 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
CTDP1Q9Y5B0 Y_RNA.40-201ENST00000362645 93 ntBASIC3.11□□□□□ -1.91
CTDP1Q9Y5B0 RNU6-727P-201ENST00000363592 107 ntBASIC3.11□□□□□ -1.91
CTDP1Q9Y5B0 RNU6-1083P-201ENST00000384022 107 ntBASIC3.11□□□□□ -1.91
CTDP1Q9Y5B0 Y_RNA.418-201ENST00000384029 102 ntBASIC3.11□□□□□ -1.91
CTDP1Q9Y5B0 RNU6-378P-201ENST00000384324 107 ntBASIC3.11□□□□□ -1.91
CTDP1Q9Y5B0 MIR181A2-201ENST00000384863 110 ntBASIC3.11□□□□□ -1.91
CTDP1Q9Y5B0 MIR548M-201ENST00000408260 86 ntBASIC3.11□□□□□ -1.91
CTDP1Q9Y5B0 RNU2-61P-201ENST00000411069 191 ntBASIC3.11□□□□□ -1.91
CTDP1Q9Y5B0 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC3.11□□□□□ -1.91
CTDP1Q9Y5B0 MTCO1P5-201ENST00000433573 344 ntBASIC3.11□□□□□ -1.91
CTDP1Q9Y5B0 AC104332.1-201ENST00000440471 797 ntBASIC3.11□□□□□ -1.91
CTDP1Q9Y5B0 AC104389.3-201ENST00000445629 235 ntBASIC3.11□□□□□ -1.91
CTDP1Q9Y5B0 AC003982.1-202ENST00000469928 248 ntBASIC3.11□□□□□ -1.91
CTDP1Q9Y5B0 AC091959.1-201ENST00000495857 238 ntBASIC3.11□□□□□ -1.91
CTDP1Q9Y5B0 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC3.11□□□□□ -1.91
CTDP1Q9Y5B0 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.11□□□□□ -1.91
CTDP1Q9Y5B0 MIR3605-201ENST00000583214 100 ntBASIC3.11□□□□□ -1.91
CTDP1Q9Y5B0 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC3.11□□□□□ -1.91
CTDP1Q9Y5B0 AL391813.1-201ENST00000603098 260 ntBASIC3.11□□□□□ -1.91
CTDP1Q9Y5B0 AC022441.3-201ENST00000605737 136 ntBASIC3.11□□□□□ -1.91
CTDP1Q9Y5B0 AL590240.4-201ENST00000616908 390 ntBASIC3.11□□□□□ -1.91
CTDP1Q9Y5B0 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC3.11□□□□□ -1.91
CTDP1Q9Y5B0 FO624990.1-201ENST00000636373 85 ntBASIC3.11□□□□□ -1.91
CTDP1Q9Y5B0 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CTDP1Q9Y5B0 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CTDP1Q9Y5B0 Z82209.1-201ENST00000422141 2135 ntBASIC3.1□□□□□ -1.91
CTDP1Q9Y5B0 Y_RNA.122-201ENST00000363331 96 ntBASIC3.1□□□□□ -1.91
CTDP1Q9Y5B0 Y_RNA.136-201ENST00000363444 102 ntBASIC3.1□□□□□ -1.91
CTDP1Q9Y5B0 Y_RNA.292-201ENST00000364904 97 ntBASIC3.1□□□□□ -1.91
CTDP1Q9Y5B0 RNU6-886P-201ENST00000384319 105 ntBASIC3.1□□□□□ -1.91
CTDP1Q9Y5B0 Y_RNA.626-201ENST00000411288 95 ntBASIC3.1□□□□□ -1.91
CTDP1Q9Y5B0 RAB28P5-201ENST00000427490 651 ntBASIC3.1□□□□□ -1.91
CTDP1Q9Y5B0 MICF-203ENST00000432679 129 ntBASIC3.1□□□□□ -1.91
CTDP1Q9Y5B0 IFNA11P-201ENST00000446352 526 ntBASIC3.1□□□□□ -1.91
CTDP1Q9Y5B0 snoU13.14-201ENST00000459372 104 ntBASIC3.1□□□□□ -1.91
CTDP1Q9Y5B0 AP001324.2-201ENST00000461163 319 ntBASIC3.1□□□□□ -1.91
CTDP1Q9Y5B0 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC3.1□□□□□ -1.91
CTDP1Q9Y5B0 SNORA9.3-201ENST00000516383 129 ntBASIC3.1□□□□□ -1.91
CTDP1Q9Y5B0 SNORA27.4-201ENST00000516650 95 ntBASIC3.1□□□□□ -1.91
CTDP1Q9Y5B0 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC3.1□□□□□ -1.91
CTDP1Q9Y5B0 AP002392.1-201ENST00000537692 208 ntBASIC3.1□□□□□ -1.91
CTDP1Q9Y5B0 CBX3P4-201ENST00000538909 354 ntBASIC3.1□□□□□ -1.91
CTDP1Q9Y5B0 RPL21P9-201ENST00000556149 474 ntBASIC3.1□□□□□ -1.91
CTDP1Q9Y5B0 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC3.1□□□□□ -1.91
CTDP1Q9Y5B0 AC055872.1-201ENST00000570978 278 ntBASIC3.1□□□□□ -1.91
CTDP1Q9Y5B0 MIR6817-201ENST00000615588 66 ntBASIC3.1□□□□□ -1.91
CTDP1Q9Y5B0 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC3.1□□□□□ -1.91
CTDP1Q9Y5B0 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC3.1□□□□□ -1.91
CTDP1Q9Y5B0 AC080100.1-201ENST00000624239 5356 ntBASIC3.1□□□□□ -1.91
CTDP1Q9Y5B0 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CTDP1Q9Y5B0 RNU1-62P-201ENST00000362599 164 ntBASIC3.09□□□□□ -1.91
CTDP1Q9Y5B0 RNA5SP68-201ENST00000363885 119 ntBASIC3.09□□□□□ -1.91
CTDP1Q9Y5B0 RNA5SP126-201ENST00000365092 109 ntBASIC3.09□□□□□ -1.91
CTDP1Q9Y5B0 RNY4P28-201ENST00000365281 93 ntBASIC3.09□□□□□ -1.91
CTDP1Q9Y5B0 RNU6-651P-201ENST00000411040 105 ntBASIC3.09□□□□□ -1.91
CTDP1Q9Y5B0 AL451074.5-201ENST00000415894 435 ntBASIC3.09□□□□□ -1.91
CTDP1Q9Y5B0 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC3.09□□□□□ -1.91
CTDP1Q9Y5B0 COX6CP14-201ENST00000469580 174 ntBASIC3.09□□□□□ -1.91
CTDP1Q9Y5B0 AP004217.1-201ENST00000480579 346 ntBASIC3.09□□□□□ -1.91
CTDP1Q9Y5B0 SNORD116-28-201ENST00000516123 91 ntBASIC3.09□□□□□ -1.91
CTDP1Q9Y5B0 RNA5SP76-201ENST00000516277 87 ntBASIC3.09□□□□□ -1.91
CTDP1Q9Y5B0 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC3.09□□□□□ -1.91
CTDP1Q9Y5B0 AL512605.2-201ENST00000592972 256 ntBASIC3.09□□□□□ -1.91
CTDP1Q9Y5B0 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC3.09□□□□□ -1.91
CTDP1Q9Y5B0 PCGEM1.1-201ENST00000613431 131 ntBASIC3.09□□□□□ -1.91
CTDP1Q9Y5B0 AC004467.1-201ENST00000615678 330 ntBASIC3.09□□□□□ -1.91
CTDP1Q9Y5B0 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC3.08□□□□□ -1.92
CTDP1Q9Y5B0 UBE2WP1-201ENST00000362030 340 ntBASIC3.08□□□□□ -1.92
CTDP1Q9Y5B0 RNU6-1310P-201ENST00000384153 107 ntBASIC3.08□□□□□ -1.92
CTDP1Q9Y5B0 RNU6-1289P-201ENST00000384431 106 ntBASIC3.08□□□□□ -1.92
CTDP1Q9Y5B0 MIR186-201ENST00000384988 86 ntBASIC3.08□□□□□ -1.92
CTDP1Q9Y5B0 ELOCP21-201ENST00000412558 336 ntBASIC3.08□□□□□ -1.92
CTDP1Q9Y5B0 AIMP1P2-201ENST00000425294 312 ntBASIC3.08□□□□□ -1.92
CTDP1Q9Y5B0 AC112771.1-201ENST00000463581 102 ntBASIC3.08□□□□□ -1.92
CTDP1Q9Y5B0 AL121594.1-201ENST00000475906 575 ntBASIC3.08□□□□□ -1.92
CTDP1Q9Y5B0 RNU1-104P-201ENST00000517280 175 ntBASIC3.08□□□□□ -1.92
CTDP1Q9Y5B0 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC3.08□□□□□ -1.92
CTDP1Q9Y5B0 AC027176.1-201ENST00000560204 514 ntBASIC3.08□□□□□ -1.92
CTDP1Q9Y5B0 Z83818.1-201ENST00000603584 150 ntBASIC3.08□□□□□ -1.92
CTDP1Q9Y5B0 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC3.08□□□□□ -1.92
CTDP1Q9Y5B0 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
CTDP1Q9Y5B0 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
CTDP1Q9Y5B0 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
CTDP1Q9Y5B0 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
CTDP1Q9Y5B0 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
CTDP1Q9Y5B0 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC3.07□□□□□ -1.92
CTDP1Q9Y5B0 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
CTDP1Q9Y5B0 RNU6-655P-201ENST00000362858 107 ntBASIC3.07□□□□□ -1.92
CTDP1Q9Y5B0 Y_RNA.101-201ENST00000363154 102 ntBASIC3.07□□□□□ -1.92
CTDP1Q9Y5B0 RNA5SP201-201ENST00000410316 124 ntBASIC3.07□□□□□ -1.92
CTDP1Q9Y5B0 RNA5SP475-201ENST00000410568 110 ntBASIC3.07□□□□□ -1.92
CTDP1Q9Y5B0 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC3.07□□□□□ -1.92
CTDP1Q9Y5B0 RNU7-120P-201ENST00000459334 63 ntBASIC3.07□□□□□ -1.92
CTDP1Q9Y5B0 AC107393.1-201ENST00000512403 346 ntBASIC3.07□□□□□ -1.92
CTDP1Q9Y5B0 RNA5SP148-201ENST00000516527 94 ntBASIC3.07□□□□□ -1.92
CTDP1Q9Y5B0 EIF4A1P12-201ENST00000551910 141 ntBASIC3.07□□□□□ -1.92
CTDP1Q9Y5B0 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC3.07□□□□□ -1.92
CTDP1Q9Y5B0 AC026470.2-201ENST00000561492 181 ntBASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 207.7 ms