Protein–RNA interactions for Protein: Q9Y3E1

HDGFL3, Hepatoma-derived growth factor-related protein 3, humanhuman

Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3Q9Y3E1 AP002963.1-201ENST00000530590 184 ntBASIC0.38□□□□□ -2.35
HDGFL3Q9Y3E1 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC0.38□□□□□ -2.35
HDGFL3Q9Y3E1 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC0.38□□□□□ -2.35
HDGFL3Q9Y3E1 MTND1P15-201ENST00000579262 949 ntBASIC0.38□□□□□ -2.35
HDGFL3Q9Y3E1 MIR5583-1-201ENST00000580941 59 ntBASIC0.38□□□□□ -2.35
HDGFL3Q9Y3E1 AL391903.3-201ENST00000612158 163 ntBASIC0.38□□□□□ -2.35
HDGFL3Q9Y3E1 AC022709.1-201ENST00000615967 87 ntBASIC0.38□□□□□ -2.35
HDGFL3Q9Y3E1 MIR1185-2-201ENST00000408687 86 ntBASIC0.37□□□□□ -2.35
HDGFL3Q9Y3E1 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC0.37□□□□□ -2.35
HDGFL3Q9Y3E1 AC098934.3-201ENST00000430450 190 ntBASIC0.37□□□□□ -2.35
HDGFL3Q9Y3E1 CALM2P4-201ENST00000430810 426 ntBASIC0.37□□□□□ -2.35
HDGFL3Q9Y3E1 OFD1P4Y-201ENST00000455273 1179 ntBASIC0.37□□□□□ -2.35
HDGFL3Q9Y3E1 TPT1P7-201ENST00000458300 517 ntBASIC0.37□□□□□ -2.35
HDGFL3Q9Y3E1 snoU13.25-201ENST00000458945 104 ntBASIC0.37□□□□□ -2.35
HDGFL3Q9Y3E1 RNU6-405P-201ENST00000516637 110 ntBASIC0.37□□□□□ -2.35
HDGFL3Q9Y3E1 RNU1-117P-201ENST00000517041 158 ntBASIC0.37□□□□□ -2.35
HDGFL3Q9Y3E1 RNA5SP454-201ENST00000517231 127 ntBASIC0.37□□□□□ -2.35
HDGFL3Q9Y3E1 AC027419.1-201ENST00000522976 328 ntBASIC0.37□□□□□ -2.35
HDGFL3Q9Y3E1 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC0.37□□□□□ -2.35
HDGFL3Q9Y3E1 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.37□□□□□ -2.35
HDGFL3Q9Y3E1 AC243829.3-201ENST00000622177 108 ntBASIC0.37□□□□□ -2.35
HDGFL3Q9Y3E1 Y_RNA.123-201ENST00000363338 102 ntBASIC0.36□□□□□ -2.35
HDGFL3Q9Y3E1 SNORA50A-201ENST00000384225 134 ntBASIC0.36□□□□□ -2.35
HDGFL3Q9Y3E1 U8.16-201ENST00000391279 133 ntBASIC0.36□□□□□ -2.35
HDGFL3Q9Y3E1 AC244023.1-201ENST00000426884 112 ntBASIC0.36□□□□□ -2.35
HDGFL3Q9Y3E1 AC133104.1-201ENST00000429100 218 ntBASIC0.36□□□□□ -2.35
HDGFL3Q9Y3E1 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC0.36□□□□□ -2.35
HDGFL3Q9Y3E1 NDUFA5P4-201ENST00000436704 385 ntBASIC0.36□□□□□ -2.35
HDGFL3Q9Y3E1 NDUFB4P10-201ENST00000452541 359 ntBASIC0.36□□□□□ -2.35
HDGFL3Q9Y3E1 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC0.36□□□□□ -2.35
HDGFL3Q9Y3E1 AL356010.1-201ENST00000456364 102 ntBASIC0.36□□□□□ -2.35
HDGFL3Q9Y3E1 U8.21-201ENST00000459536 136 ntBASIC0.36□□□□□ -2.35
HDGFL3Q9Y3E1 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC0.36□□□□□ -2.35
HDGFL3Q9Y3E1 MTND1P5-201ENST00000517906 940 ntBASIC0.36□□□□□ -2.35
HDGFL3Q9Y3E1 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC0.36□□□□□ -2.35
HDGFL3Q9Y3E1 NTS-203ENST00000551529 801 ntTSL 3 BASIC0.36□□□□□ -2.35
HDGFL3Q9Y3E1 FRG2DP-202ENST00000566967 323 ntBASIC0.36□□□□□ -2.35
HDGFL3Q9Y3E1 AC242498.1-201ENST00000604134 111 ntBASIC0.36□□□□□ -2.35
HDGFL3Q9Y3E1 SNORD11B-201ENST00000607707 90 ntBASIC0.36□□□□□ -2.35
HDGFL3Q9Y3E1 AC064836.2-201ENST00000609491 462 ntBASIC0.36□□□□□ -2.35
HDGFL3Q9Y3E1 AL096861.1-201ENST00000610899 123 ntBASIC0.36□□□□□ -2.35
HDGFL3Q9Y3E1 AC243994.1-201ENST00000618627 109 ntBASIC0.36□□□□□ -2.35
HDGFL3Q9Y3E1 AC137590.2-201ENST00000619709 240 ntBASIC0.36□□□□□ -2.35
HDGFL3Q9Y3E1 ZNF204P-201ENST00000416749 2397 ntBASIC0.35□□□□□ -2.35
HDGFL3Q9Y3E1 RNU6-181P-201ENST00000363225 107 ntBASIC0.35□□□□□ -2.35
HDGFL3Q9Y3E1 RNU6-945P-201ENST00000383947 107 ntBASIC0.35□□□□□ -2.35
HDGFL3Q9Y3E1 RNU6-163P-201ENST00000384396 106 ntBASIC0.35□□□□□ -2.35
HDGFL3Q9Y3E1 RNU6-925P-201ENST00000384629 104 ntBASIC0.35□□□□□ -2.35
HDGFL3Q9Y3E1 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC0.35□□□□□ -2.35
HDGFL3Q9Y3E1 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC0.35□□□□□ -2.35
HDGFL3Q9Y3E1 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC0.35□□□□□ -2.35
HDGFL3Q9Y3E1 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC0.35□□□□□ -2.35
HDGFL3Q9Y3E1 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC0.35□□□□□ -2.35
HDGFL3Q9Y3E1 LINC01399-202ENST00000458450 244 ntBASIC0.35□□□□□ -2.35
HDGFL3Q9Y3E1 RNU7-180P-201ENST00000459240 63 ntBASIC0.35□□□□□ -2.35
HDGFL3Q9Y3E1 U7.7-201ENST00000459276 60 ntBASIC0.35□□□□□ -2.35
HDGFL3Q9Y3E1 SNORD42A-201ENST00000459584 64 ntBASIC0.35□□□□□ -2.35
HDGFL3Q9Y3E1 SNORA14.1-201ENST00000516113 141 ntBASIC0.35□□□□□ -2.35
HDGFL3Q9Y3E1 RNU6-496P-201ENST00000516145 99 ntBASIC0.35□□□□□ -2.35
HDGFL3Q9Y3E1 RNU6-445P-201ENST00000516949 107 ntBASIC0.35□□□□□ -2.35
HDGFL3Q9Y3E1 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC0.35□□□□□ -2.35
HDGFL3Q9Y3E1 HIF1AP1-201ENST00000553642 175 ntBASIC0.35□□□□□ -2.35
HDGFL3Q9Y3E1 SCOCP1-201ENST00000554676 349 ntBASIC0.35□□□□□ -2.35
HDGFL3Q9Y3E1 MIR4711-201ENST00000578274 70 ntBASIC0.35□□□□□ -2.35
HDGFL3Q9Y3E1 AC025627.3-201ENST00000582078 182 ntBASIC0.35□□□□□ -2.35
HDGFL3Q9Y3E1 AL360219.1-201ENST00000610230 366 ntBASIC0.35□□□□□ -2.35
HDGFL3Q9Y3E1 OR5AK4P-201ENST00000635912 903 ntBASIC0.35□□□□□ -2.35
HDGFL3Q9Y3E1 RNU6-1317P-201ENST00000364582 104 ntBASIC0.34□□□□□ -2.36
HDGFL3Q9Y3E1 RNU6-245P-201ENST00000384020 107 ntBASIC0.34□□□□□ -2.36
HDGFL3Q9Y3E1 RNU6-517P-201ENST00000384362 110 ntBASIC0.34□□□□□ -2.36
HDGFL3Q9Y3E1 RNU6-297P-201ENST00000384636 107 ntBASIC0.34□□□□□ -2.36
HDGFL3Q9Y3E1 RNU1-139P-201ENST00000391307 165 ntBASIC0.34□□□□□ -2.36
HDGFL3Q9Y3E1 MIR450B-201ENST00000401182 78 ntBASIC0.34□□□□□ -2.36
HDGFL3Q9Y3E1 MIR936-201ENST00000401264 98 ntBASIC0.34□□□□□ -2.36
HDGFL3Q9Y3E1 AL031577.2-201ENST00000404133 280 ntBASIC0.34□□□□□ -2.36
HDGFL3Q9Y3E1 SNORD99-201ENST00000408612 74 ntBASIC0.34□□□□□ -2.36
HDGFL3Q9Y3E1 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC0.34□□□□□ -2.36
HDGFL3Q9Y3E1 AC233266.1-201ENST00000454518 96 ntBASIC0.34□□□□□ -2.36
HDGFL3Q9Y3E1 OR9P1P-201ENST00000496431 281 ntBASIC0.34□□□□□ -2.36
HDGFL3Q9Y3E1 SNORA18.6-201ENST00000516792 115 ntBASIC0.34□□□□□ -2.36
HDGFL3Q9Y3E1 AC022868.1-201ENST00000517767 391 ntBASIC0.34□□□□□ -2.36
HDGFL3Q9Y3E1 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC0.34□□□□□ -2.36
HDGFL3Q9Y3E1 SUB1P2-201ENST00000556401 297 ntBASIC0.34□□□□□ -2.36
HDGFL3Q9Y3E1 AC090616.2-202ENST00000584248 222 ntBASIC0.34□□□□□ -2.36
HDGFL3Q9Y3E1 AC242852.1-201ENST00000612151 96 ntBASIC0.34□□□□□ -2.36
HDGFL3Q9Y3E1 AC243829.6-201ENST00000612652 106 ntBASIC0.34□□□□□ -2.36
HDGFL3Q9Y3E1 AC244015.1-201ENST00000622301 99 ntBASIC0.34□□□□□ -2.36
HDGFL3Q9Y3E1 Y_RNA.122-201ENST00000363331 96 ntBASIC0.33□□□□□ -2.36
HDGFL3Q9Y3E1 MIR487A-201ENST00000385009 80 ntBASIC0.33□□□□□ -2.36
HDGFL3Q9Y3E1 AL049545.1-201ENST00000401856 572 ntBASIC0.33□□□□□ -2.36
HDGFL3Q9Y3E1 RNU2-9P-201ENST00000410194 145 ntBASIC0.33□□□□□ -2.36
HDGFL3Q9Y3E1 RNU6-248P-201ENST00000410720 107 ntBASIC0.33□□□□□ -2.36
HDGFL3Q9Y3E1 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC0.33□□□□□ -2.36
HDGFL3Q9Y3E1 MTND4P32-201ENST00000437189 1237 ntBASIC0.33□□□□□ -2.36
HDGFL3Q9Y3E1 USP9YP29-201ENST00000445112 563 ntBASIC0.33□□□□□ -2.36
HDGFL3Q9Y3E1 AC093850.1-201ENST00000454121 251 ntBASIC0.33□□□□□ -2.36
HDGFL3Q9Y3E1 RNU6-1132P-201ENST00000459214 107 ntBASIC0.33□□□□□ -2.36
HDGFL3Q9Y3E1 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC0.33□□□□□ -2.36
HDGFL3Q9Y3E1 RNU4-57P-201ENST00000515980 135 ntBASIC0.33□□□□□ -2.36
HDGFL3Q9Y3E1 AK6P2-201ENST00000549020 471 ntBASIC0.33□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 127.8 ms