Protein–RNA interactions for Protein: Q9UN37

VPS4A, Vacuolar protein sorting-associated protein 4A, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4AQ9UN37 Y_RNA.512-201ENST00000384518 102 ntBASIC2.5□□□□□ -2.01
VPS4AQ9UN37 RNA5SP181-201ENST00000410246 98 ntBASIC2.5□□□□□ -2.01
VPS4AQ9UN37 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.5□□□□□ -2.01
VPS4AQ9UN37 AC005002.2-201ENST00000438228 269 ntBASIC2.5□□□□□ -2.01
VPS4AQ9UN37 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.5□□□□□ -2.01
VPS4AQ9UN37 RNU6-397P-201ENST00000516226 104 ntBASIC2.5□□□□□ -2.01
VPS4AQ9UN37 RNU6-1098P-201ENST00000516772 96 ntBASIC2.5□□□□□ -2.01
VPS4AQ9UN37 AC022616.8-201ENST00000533569 253 ntBASIC2.5□□□□□ -2.01
VPS4AQ9UN37 RRN3P3-201ENST00000549207 578 ntBASIC2.5□□□□□ -2.01
VPS4AQ9UN37 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.5□□□□□ -2.01
VPS4AQ9UN37 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.5□□□□□ -2.01
VPS4AQ9UN37 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.5□□□□□ -2.01
VPS4AQ9UN37 AC068205.3-201ENST00000636385 468 ntBASIC2.5□□□□□ -2.01
VPS4AQ9UN37 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
VPS4AQ9UN37 ANKRD30BP1-201ENST00000451052 2186 ntBASIC2.49□□□□□ -2.01
VPS4AQ9UN37 Y_RNA.64-201ENST00000362845 102 ntBASIC2.49□□□□□ -2.01
VPS4AQ9UN37 RNU1-23P-201ENST00000363361 144 ntBASIC2.49□□□□□ -2.01
VPS4AQ9UN37 Y_RNA.230-201ENST00000364348 109 ntBASIC2.49□□□□□ -2.01
VPS4AQ9UN37 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.49□□□□□ -2.01
VPS4AQ9UN37 TRAPPC2P8-201ENST00000440676 396 ntBASIC2.49□□□□□ -2.01
VPS4AQ9UN37 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.49□□□□□ -2.01
VPS4AQ9UN37 RPS23P5-201ENST00000495419 428 ntBASIC2.49□□□□□ -2.01
VPS4AQ9UN37 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.49□□□□□ -2.01
VPS4AQ9UN37 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.49□□□□□ -2.01
VPS4AQ9UN37 MIR4300-201ENST00000581016 96 ntBASIC2.49□□□□□ -2.01
VPS4AQ9UN37 MIR5092-201ENST00000583139 88 ntBASIC2.49□□□□□ -2.01
VPS4AQ9UN37 U4.1-201ENST00000620349 87 ntBASIC2.49□□□□□ -2.01
VPS4AQ9UN37 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.49□□□□□ -2.01
VPS4AQ9UN37 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
VPS4AQ9UN37 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
VPS4AQ9UN37 Y_RNA.415-201ENST00000384012 112 ntBASIC2.48□□□□□ -2.01
VPS4AQ9UN37 RNU6-926P-201ENST00000384075 107 ntBASIC2.48□□□□□ -2.01
VPS4AQ9UN37 RNU6-574P-201ENST00000384265 107 ntBASIC2.48□□□□□ -2.01
VPS4AQ9UN37 MIR144-201ENST00000384886 86 ntBASIC2.48□□□□□ -2.01
VPS4AQ9UN37 MIR586-201ENST00000385035 97 ntBASIC2.48□□□□□ -2.01
VPS4AQ9UN37 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.48□□□□□ -2.01
VPS4AQ9UN37 AC018868.1-201ENST00000491307 315 ntBASIC2.48□□□□□ -2.01
VPS4AQ9UN37 ATP5EP1-201ENST00000510257 156 ntBASIC2.48□□□□□ -2.01
VPS4AQ9UN37 RNU6-408P-201ENST00000515910 100 ntBASIC2.48□□□□□ -2.01
VPS4AQ9UN37 Y_RNA.668-201ENST00000516233 93 ntBASIC2.48□□□□□ -2.01
VPS4AQ9UN37 RNA5SP82-201ENST00000516707 92 ntBASIC2.48□□□□□ -2.01
VPS4AQ9UN37 SNORA40.15-201ENST00000516884 107 ntBASIC2.48□□□□□ -2.01
VPS4AQ9UN37 RNA5SP402-201ENST00000517148 110 ntBASIC2.48□□□□□ -2.01
VPS4AQ9UN37 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC2.48□□□□□ -2.01
VPS4AQ9UN37 AC018448.1-201ENST00000552843 316 ntBASIC2.48□□□□□ -2.01
VPS4AQ9UN37 AP000942.4-201ENST00000604811 241 ntBASIC2.48□□□□□ -2.01
VPS4AQ9UN37 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC2.48□□□□□ -2.01
VPS4AQ9UN37 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC2.48□□□□□ -2.01
VPS4AQ9UN37 MIR1248-201ENST00000629190 106 ntBASIC2.48□□□□□ -2.01
VPS4AQ9UN37 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.48□□□□□ -2.01
VPS4AQ9UN37 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
VPS4AQ9UN37 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.48□□□□□ -2.01
VPS4AQ9UN37 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.48□□□□□ -2.01
VPS4AQ9UN37 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.48□□□□□ -2.01
VPS4AQ9UN37 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
VPS4AQ9UN37 RNU6-238P-201ENST00000363313 106 ntBASIC2.47□□□□□ -2.01
VPS4AQ9UN37 RNU6-626P-201ENST00000363354 107 ntBASIC2.47□□□□□ -2.01
VPS4AQ9UN37 Y_RNA.143-201ENST00000363520 106 ntBASIC2.47□□□□□ -2.01
VPS4AQ9UN37 Y_RNA.193-201ENST00000363979 102 ntBASIC2.47□□□□□ -2.01
VPS4AQ9UN37 RNA5SP125-201ENST00000364843 120 ntBASIC2.47□□□□□ -2.01
VPS4AQ9UN37 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC2.47□□□□□ -2.01
VPS4AQ9UN37 RNU6-546P-201ENST00000383991 107 ntBASIC2.47□□□□□ -2.01
VPS4AQ9UN37 Y_RNA.556-201ENST00000384677 113 ntBASIC2.47□□□□□ -2.01
VPS4AQ9UN37 RNU6-1072P-201ENST00000384703 107 ntBASIC2.47□□□□□ -2.01
VPS4AQ9UN37 Y_RNA.570-201ENST00000384750 101 ntBASIC2.47□□□□□ -2.01
VPS4AQ9UN37 RNU6-443P-201ENST00000384780 107 ntBASIC2.47□□□□□ -2.01
VPS4AQ9UN37 RNU2-63P-201ENST00000410792 194 ntBASIC2.47□□□□□ -2.01
VPS4AQ9UN37 AL135786.1-201ENST00000415892 214 ntBASIC2.47□□□□□ -2.01
VPS4AQ9UN37 snoU13.23-201ENST00000458863 104 ntBASIC2.47□□□□□ -2.01
VPS4AQ9UN37 MIR449C-201ENST00000516047 92 ntBASIC2.47□□□□□ -2.01
VPS4AQ9UN37 RNY3P15-201ENST00000516297 97 ntBASIC2.47□□□□□ -2.01
VPS4AQ9UN37 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC2.47□□□□□ -2.01
VPS4AQ9UN37 AP003733.2-201ENST00000529409 171 ntBASIC2.47□□□□□ -2.01
VPS4AQ9UN37 AP002001.1-203ENST00000534002 267 ntBASIC2.47□□□□□ -2.01
VPS4AQ9UN37 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.47□□□□□ -2.01
VPS4AQ9UN37 AC004817.2-201ENST00000561794 651 ntBASIC2.47□□□□□ -2.01
VPS4AQ9UN37 DEFB122-202ENST00000569013 197 ntBASIC2.47□□□□□ -2.01
VPS4AQ9UN37 MIR3149-201ENST00000584629 83 ntBASIC2.47□□□□□ -2.01
VPS4AQ9UN37 CTSLP2-204ENST00000629029 392 ntBASIC2.47□□□□□ -2.01
VPS4AQ9UN37 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
VPS4AQ9UN37 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC2.47□□□□□ -2.01
VPS4AQ9UN37 snoU2_19.2-201ENST00000363024 80 ntBASIC2.46□□□□□ -2.02
VPS4AQ9UN37 RNU6-727P-201ENST00000363592 107 ntBASIC2.46□□□□□ -2.02
VPS4AQ9UN37 RNU6-20P-201ENST00000384106 107 ntBASIC2.46□□□□□ -2.02
VPS4AQ9UN37 RNU6-937P-201ENST00000384325 106 ntBASIC2.46□□□□□ -2.02
VPS4AQ9UN37 Y_RNA.581-201ENST00000391017 97 ntBASIC2.46□□□□□ -2.02
VPS4AQ9UN37 AL033519.2-201ENST00000403958 392 ntBASIC2.46□□□□□ -2.02
VPS4AQ9UN37 MIR1302-3-201ENST00000408128 138 ntBASIC2.46□□□□□ -2.02
VPS4AQ9UN37 SNORA3.2-201ENST00000408221 125 ntBASIC2.46□□□□□ -2.02
VPS4AQ9UN37 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.46□□□□□ -2.02
VPS4AQ9UN37 RNA5SP425-201ENST00000410336 112 ntBASIC2.46□□□□□ -2.02
VPS4AQ9UN37 RNU5A-5P-201ENST00000411054 116 ntBASIC2.46□□□□□ -2.02
VPS4AQ9UN37 RNU2-32P-201ENST00000411193 191 ntBASIC2.46□□□□□ -2.02
VPS4AQ9UN37 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC2.46□□□□□ -2.02
VPS4AQ9UN37 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC2.46□□□□□ -2.02
VPS4AQ9UN37 RAB28P5-201ENST00000427490 651 ntBASIC2.46□□□□□ -2.02
VPS4AQ9UN37 UQCRBP2-201ENST00000447827 297 ntBASIC2.46□□□□□ -2.02
VPS4AQ9UN37 HMGN2P9-201ENST00000476875 229 ntBASIC2.46□□□□□ -2.02
VPS4AQ9UN37 AC098869.1-201ENST00000481627 292 ntBASIC2.46□□□□□ -2.02
VPS4AQ9UN37 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.46□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 127.4 ms