Protein–RNA interactions for Protein: Q9UI47

CTNNA3, Catenin alpha-3, humanhuman

Predictions only

Length 895 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA3Q9UI47 MTND3P16-201ENST00000452205 344 ntBASIC1.16□□□□□ -2.22
CTNNA3Q9UI47 NDUFB4P10-201ENST00000452541 359 ntBASIC1.16□□□□□ -2.22
CTNNA3Q9UI47 snoU13.6-201ENST00000458785 104 ntBASIC1.16□□□□□ -2.22
CTNNA3Q9UI47 RNA5SP54-201ENST00000516951 92 ntBASIC1.16□□□□□ -2.22
CTNNA3Q9UI47 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC1.16□□□□□ -2.22
CTNNA3Q9UI47 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC1.16□□□□□ -2.22
CTNNA3Q9UI47 AC025423.5-201ENST00000550230 219 ntBASIC1.16□□□□□ -2.22
CTNNA3Q9UI47 MIR5006-201ENST00000583027 110 ntBASIC1.16□□□□□ -2.22
CTNNA3Q9UI47 AP000907.4-201ENST00000604143 237 ntBASIC1.16□□□□□ -2.22
CTNNA3Q9UI47 TEX41-243ENST00000614173 190 ntTSL 5 BASIC1.16□□□□□ -2.22
CTNNA3Q9UI47 OR5AK4P-201ENST00000635912 903 ntBASIC1.16□□□□□ -2.22
CTNNA3Q9UI47 RNU6-522P-201ENST00000364497 107 ntBASIC1.15□□□□□ -2.23
CTNNA3Q9UI47 RNU1-139P-201ENST00000391307 165 ntBASIC1.15□□□□□ -2.23
CTNNA3Q9UI47 MTCO2P16-201ENST00000436962 677 ntBASIC1.15□□□□□ -2.23
CTNNA3Q9UI47 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.15□□□□□ -2.23
CTNNA3Q9UI47 DYNLT3P2-201ENST00000442517 295 ntBASIC1.15□□□□□ -2.23
CTNNA3Q9UI47 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.15□□□□□ -2.23
CTNNA3Q9UI47 AF186996.7-201ENST00000492781 209 ntBASIC1.15□□□□□ -2.23
CTNNA3Q9UI47 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.15□□□□□ -2.23
CTNNA3Q9UI47 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC1.15□□□□□ -2.23
CTNNA3Q9UI47 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC1.15□□□□□ -2.23
CTNNA3Q9UI47 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC1.15□□□□□ -2.23
CTNNA3Q9UI47 BX284668.6-201ENST00000606899 438 ntBASIC1.15□□□□□ -2.23
CTNNA3Q9UI47 AL133215.3-201ENST00000609801 448 ntBASIC1.15□□□□□ -2.23
CTNNA3Q9UI47 FAM157A-202ENST00000615155 405 ntBASIC1.15□□□□□ -2.23
CTNNA3Q9UI47 AC068137.3-201ENST00000639191 341 ntBASIC1.15□□□□□ -2.23
CTNNA3Q9UI47 MTND5P26-201ENST00000426018 1752 ntBASIC1.15□□□□□ -2.23
CTNNA3Q9UI47 Y_RNA.123-201ENST00000363338 102 ntBASIC1.14□□□□□ -2.23
CTNNA3Q9UI47 RNU6-1085P-201ENST00000363576 107 ntBASIC1.14□□□□□ -2.23
CTNNA3Q9UI47 SNORA25-201ENST00000384384 134 ntBASIC1.14□□□□□ -2.23
CTNNA3Q9UI47 RNU6-950P-201ENST00000384651 107 ntBASIC1.14□□□□□ -2.23
CTNNA3Q9UI47 SNORD37.1-201ENST00000390968 65 ntBASIC1.14□□□□□ -2.23
CTNNA3Q9UI47 RNU6-325P-201ENST00000411132 105 ntBASIC1.14□□□□□ -2.23
CTNNA3Q9UI47 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC1.14□□□□□ -2.23
CTNNA3Q9UI47 USP9YP14-201ENST00000430663 563 ntBASIC1.14□□□□□ -2.23
CTNNA3Q9UI47 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC1.14□□□□□ -2.23
CTNNA3Q9UI47 HMGN2P34-201ENST00000437647 269 ntBASIC1.14□□□□□ -2.23
CTNNA3Q9UI47 MTCO3P8-201ENST00000453691 755 ntBASIC1.14□□□□□ -2.23
CTNNA3Q9UI47 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC1.14□□□□□ -2.23
CTNNA3Q9UI47 RNU6-405P-201ENST00000516637 110 ntBASIC1.14□□□□□ -2.23
CTNNA3Q9UI47 Y_RNA.693-201ENST00000516641 110 ntBASIC1.14□□□□□ -2.23
CTNNA3Q9UI47 RNU6-1198P-201ENST00000516904 67 ntBASIC1.14□□□□□ -2.23
CTNNA3Q9UI47 AC104576.1-201ENST00000524225 88 ntBASIC1.14□□□□□ -2.23
CTNNA3Q9UI47 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC1.14□□□□□ -2.23
CTNNA3Q9UI47 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC1.14□□□□□ -2.23
CTNNA3Q9UI47 RN7SKP299-201ENST00000606679 301 ntBASIC1.14□□□□□ -2.23
CTNNA3Q9UI47 AL121757.2-201ENST00000611223 313 ntBASIC1.14□□□□□ -2.23
CTNNA3Q9UI47 AL359880.1-201ENST00000621879 266 ntBASIC1.14□□□□□ -2.23
CTNNA3Q9UI47 AC124864.2-201ENST00000624736 186 ntBASIC1.14□□□□□ -2.23
CTNNA3Q9UI47 SCARNA4-201ENST00000629045 128 ntBASIC1.14□□□□□ -2.23
CTNNA3Q9UI47 SNORD115-32-201ENST00000364079 82 ntBASIC1.13□□□□□ -2.23
CTNNA3Q9UI47 Y_RNA.231-201ENST00000364358 102 ntBASIC1.13□□□□□ -2.23
CTNNA3Q9UI47 RNU6-1187P-201ENST00000364771 110 ntBASIC1.13□□□□□ -2.23
CTNNA3Q9UI47 Y_RNA.359-201ENST00000365498 102 ntBASIC1.13□□□□□ -2.23
CTNNA3Q9UI47 RNU6-259P-201ENST00000383999 107 ntBASIC1.13□□□□□ -2.23
CTNNA3Q9UI47 MIR216A-201ENST00000385063 110 ntBASIC1.13□□□□□ -2.23
CTNNA3Q9UI47 AC004866.1-201ENST00000411748 78 ntBASIC1.13□□□□□ -2.23
CTNNA3Q9UI47 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC1.13□□□□□ -2.23
CTNNA3Q9UI47 SRRM1P2-201ENST00000464531 1192 ntBASIC1.13□□□□□ -2.23
CTNNA3Q9UI47 RPL23AP75-201ENST00000491601 451 ntBASIC1.13□□□□□ -2.23
CTNNA3Q9UI47 TRBVA-201ENST00000498804 316 ntBASIC1.13□□□□□ -2.23
CTNNA3Q9UI47 UBL5P1-201ENST00000507979 193 ntBASIC1.13□□□□□ -2.23
CTNNA3Q9UI47 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC1.13□□□□□ -2.23
CTNNA3Q9UI47 MRPS36P4-201ENST00000534436 298 ntBASIC1.13□□□□□ -2.23
CTNNA3Q9UI47 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.13□□□□□ -2.23
CTNNA3Q9UI47 MIR4742-201ENST00000581069 85 ntBASIC1.13□□□□□ -2.23
CTNNA3Q9UI47 RNU6-89P-201ENST00000606519 100 ntBASIC1.13□□□□□ -2.23
CTNNA3Q9UI47 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC1.13□□□□□ -2.23
CTNNA3Q9UI47 AC012676.2-201ENST00000619258 186 ntBASIC1.13□□□□□ -2.23
CTNNA3Q9UI47 AC068792.1-201ENST00000621354 417 ntBASIC1.13□□□□□ -2.23
CTNNA3Q9UI47 RNU6-1123P-201ENST00000362347 106 ntBASIC1.12□□□□□ -2.23
CTNNA3Q9UI47 SNORD113-7-201ENST00000363762 77 ntBASIC1.12□□□□□ -2.23
CTNNA3Q9UI47 SNORA4.2-201ENST00000365313 147 ntBASIC1.12□□□□□ -2.23
CTNNA3Q9UI47 Y_RNA.381-201ENST00000365666 102 ntBASIC1.12□□□□□ -2.23
CTNNA3Q9UI47 RNY1P4-201ENST00000384595 115 ntBASIC1.12□□□□□ -2.23
CTNNA3Q9UI47 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.12□□□□□ -2.23
CTNNA3Q9UI47 MTCO3P40-201ENST00000392516 676 ntBASIC1.12□□□□□ -2.23
CTNNA3Q9UI47 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC1.12□□□□□ -2.23
CTNNA3Q9UI47 AC005534.2-201ENST00000431047 433 ntBASIC1.12□□□□□ -2.23
CTNNA3Q9UI47 MRPS10P2-201ENST00000431226 381 ntBASIC1.12□□□□□ -2.23
CTNNA3Q9UI47 RNU6-221P-201ENST00000459541 99 ntBASIC1.12□□□□□ -2.23
CTNNA3Q9UI47 RNU6-1038P-201ENST00000516516 104 ntBASIC1.12□□□□□ -2.23
CTNNA3Q9UI47 CYP3A137P-201ENST00000562436 69 ntBASIC1.12□□□□□ -2.23
CTNNA3Q9UI47 MIR3664-201ENST00000579074 99 ntBASIC1.12□□□□□ -2.23
CTNNA3Q9UI47 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.12□□□□□ -2.23
CTNNA3Q9UI47 RNU6-254P-201ENST00000363377 107 ntBASIC1.11□□□□□ -2.23
CTNNA3Q9UI47 MIR532-201ENST00000385025 91 ntBASIC1.11□□□□□ -2.23
CTNNA3Q9UI47 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
CTNNA3Q9UI47 AC008134.1-201ENST00000420943 193 ntBASIC1.11□□□□□ -2.23
CTNNA3Q9UI47 ERLEC1P1-201ENST00000433806 578 ntBASIC1.11□□□□□ -2.23
CTNNA3Q9UI47 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC1.11□□□□□ -2.23
CTNNA3Q9UI47 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.11□□□□□ -2.23
CTNNA3Q9UI47 RPS27P1-201ENST00000450552 247 ntBASIC1.11□□□□□ -2.23
CTNNA3Q9UI47 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC1.11□□□□□ -2.23
CTNNA3Q9UI47 RNU7-57P-201ENST00000459540 60 ntBASIC1.11□□□□□ -2.23
CTNNA3Q9UI47 MTND1P35-201ENST00000526739 508 ntBASIC1.11□□□□□ -2.23
CTNNA3Q9UI47 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
CTNNA3Q9UI47 AC026371.1-201ENST00000551867 419 ntBASIC1.11□□□□□ -2.23
CTNNA3Q9UI47 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC1.11□□□□□ -2.23
CTNNA3Q9UI47 AC136932.1-201ENST00000574771 208 ntBASIC1.11□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 112.6 ms