Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 MIR3976-201ENST00000606807 139 ntBASIC1.95□□□□□ -2.1
CLIP2Q9UDT6 AP000560.1-201ENST00000624150 1937 ntBASIC1.95□□□□□ -2.1
CLIP2Q9UDT6 Y_RNA.26-201ENST00000362539 101 ntBASIC1.94□□□□□ -2.1
CLIP2Q9UDT6 Y_RNA.47-201ENST00000362697 108 ntBASIC1.94□□□□□ -2.1
CLIP2Q9UDT6 SNORD115-3-201ENST00000363100 82 ntBASIC1.94□□□□□ -2.1
CLIP2Q9UDT6 RNU6-1141P-201ENST00000364520 107 ntBASIC1.94□□□□□ -2.1
CLIP2Q9UDT6 RNU6-336P-201ENST00000364891 107 ntBASIC1.94□□□□□ -2.1
CLIP2Q9UDT6 RNU6-128P-201ENST00000383976 107 ntBASIC1.94□□□□□ -2.1
CLIP2Q9UDT6 RNU6-196P-201ENST00000384315 107 ntBASIC1.94□□□□□ -2.1
CLIP2Q9UDT6 RNU6-784P-201ENST00000384330 106 ntBASIC1.94□□□□□ -2.1
CLIP2Q9UDT6 MIR1262-201ENST00000408276 93 ntBASIC1.94□□□□□ -2.1
CLIP2Q9UDT6 Y_RNA.597-201ENST00000410463 100 ntBASIC1.94□□□□□ -2.1
CLIP2Q9UDT6 RNU6-325P-201ENST00000411132 105 ntBASIC1.94□□□□□ -2.1
CLIP2Q9UDT6 RNU6-293P-201ENST00000411259 106 ntBASIC1.94□□□□□ -2.1
CLIP2Q9UDT6 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.94□□□□□ -2.1
CLIP2Q9UDT6 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC1.94□□□□□ -2.1
CLIP2Q9UDT6 RNU7-138P-201ENST00000459479 64 ntBASIC1.94□□□□□ -2.1
CLIP2Q9UDT6 AC010655.3-201ENST00000478818 450 ntBASIC1.94□□□□□ -2.1
CLIP2Q9UDT6 CBX3P8-201ENST00000532412 525 ntBASIC1.94□□□□□ -2.1
CLIP2Q9UDT6 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC1.94□□□□□ -2.1
CLIP2Q9UDT6 TRAV32-201ENST00000553993 340 ntBASIC1.94□□□□□ -2.1
CLIP2Q9UDT6 AC113195.1-201ENST00000579952 141 ntBASIC1.94□□□□□ -2.1
CLIP2Q9UDT6 MIR3149-201ENST00000584629 83 ntBASIC1.94□□□□□ -2.1
CLIP2Q9UDT6 AC092447.9-201ENST00000603395 144 ntBASIC1.94□□□□□ -2.1
CLIP2Q9UDT6 AL078605.1-201ENST00000603529 500 ntBASIC1.94□□□□□ -2.1
CLIP2Q9UDT6 CYP2C61P-201ENST00000604072 290 ntBASIC1.94□□□□□ -2.1
CLIP2Q9UDT6 AL356157.2-201ENST00000605122 111 ntBASIC1.94□□□□□ -2.1
CLIP2Q9UDT6 PISRT1.1-201ENST00000616930 107 ntBASIC1.94□□□□□ -2.1
CLIP2Q9UDT6 RNU6-238P-201ENST00000363313 106 ntBASIC1.93□□□□□ -2.1
CLIP2Q9UDT6 SNORD14D-201ENST00000384390 87 ntBASIC1.93□□□□□ -2.1
CLIP2Q9UDT6 SNORA8-201ENST00000384574 139 ntBASIC1.93□□□□□ -2.1
CLIP2Q9UDT6 RNA5SP465-201ENST00000391195 109 ntBASIC1.93□□□□□ -2.1
CLIP2Q9UDT6 MIR1283-2-201ENST00000408621 87 ntBASIC1.93□□□□□ -2.1
CLIP2Q9UDT6 AC114482.1-201ENST00000418010 247 ntBASIC1.93□□□□□ -2.1
CLIP2Q9UDT6 AL590556.1-201ENST00000423231 483 ntBASIC1.93□□□□□ -2.1
CLIP2Q9UDT6 USMG5P1-201ENST00000425964 177 ntBASIC1.93□□□□□ -2.1
CLIP2Q9UDT6 AL133396.1-201ENST00000432048 687 ntBASIC1.93□□□□□ -2.1
CLIP2Q9UDT6 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.93□□□□□ -2.1
CLIP2Q9UDT6 MTCO2P24-201ENST00000515611 426 ntBASIC1.93□□□□□ -2.1
CLIP2Q9UDT6 RNU4ATAC7P-201ENST00000516280 125 ntBASIC1.93□□□□□ -2.1
CLIP2Q9UDT6 RNU1-54P-201ENST00000517181 120 ntBASIC1.93□□□□□ -2.1
CLIP2Q9UDT6 AC069113.1-201ENST00000517763 267 ntBASIC1.93□□□□□ -2.1
CLIP2Q9UDT6 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC1.93□□□□□ -2.1
CLIP2Q9UDT6 CBX3P4-201ENST00000538909 354 ntBASIC1.93□□□□□ -2.1
CLIP2Q9UDT6 AC109446.1-201ENST00000566172 220 ntBASIC1.93□□□□□ -2.1
CLIP2Q9UDT6 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.93□□□□□ -2.1
CLIP2Q9UDT6 MIR4303-201ENST00000581299 66 ntBASIC1.93□□□□□ -2.1
CLIP2Q9UDT6 MIR3136-201ENST00000583498 78 ntBASIC1.93□□□□□ -2.1
CLIP2Q9UDT6 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC1.93□□□□□ -2.1
CLIP2Q9UDT6 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.93□□□□□ -2.1
CLIP2Q9UDT6 MPP6-209ENST00000625307 126 ntTSL 5 BASIC1.93□□□□□ -2.1
CLIP2Q9UDT6 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC1.93□□□□□ -2.1
CLIP2Q9UDT6 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
CLIP2Q9UDT6 Y_RNA.106-201ENST00000363189 100 ntBASIC1.92□□□□□ -2.1
CLIP2Q9UDT6 RNU6-593P-201ENST00000364716 112 ntBASIC1.92□□□□□ -2.1
CLIP2Q9UDT6 RNU6-99P-201ENST00000364721 107 ntBASIC1.92□□□□□ -2.1
CLIP2Q9UDT6 RNU4-42P-201ENST00000364738 142 ntBASIC1.92□□□□□ -2.1
CLIP2Q9UDT6 RNU6-806P-201ENST00000365147 105 ntBASIC1.92□□□□□ -2.1
CLIP2Q9UDT6 SNORA63.7-201ENST00000365579 123 ntBASIC1.92□□□□□ -2.1
CLIP2Q9UDT6 RNU6-142P-201ENST00000384019 107 ntBASIC1.92□□□□□ -2.1
CLIP2Q9UDT6 U8.10-201ENST00000384260 133 ntBASIC1.92□□□□□ -2.1
CLIP2Q9UDT6 RNA5SP212-201ENST00000391223 107 ntBASIC1.92□□□□□ -2.1
CLIP2Q9UDT6 CEP57L1P1-201ENST00000430943 1201 ntBASIC1.92□□□□□ -2.1
CLIP2Q9UDT6 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.92□□□□□ -2.1
CLIP2Q9UDT6 RN7SKP210-201ENST00000459176 261 ntBASIC1.92□□□□□ -2.1
CLIP2Q9UDT6 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.92□□□□□ -2.1
CLIP2Q9UDT6 AC006006.1-201ENST00000603082 144 ntBASIC1.92□□□□□ -2.1
CLIP2Q9UDT6 AL034555.1-201ENST00000604816 211 ntBASIC1.92□□□□□ -2.1
CLIP2Q9UDT6 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
CLIP2Q9UDT6 RNU6-874P-201ENST00000362390 105 ntBASIC1.91□□□□□ -2.1
CLIP2Q9UDT6 RNU6-661P-201ENST00000362409 107 ntBASIC1.91□□□□□ -2.1
CLIP2Q9UDT6 RNU6-428P-201ENST00000362942 107 ntBASIC1.91□□□□□ -2.1
CLIP2Q9UDT6 RNU6-490P-201ENST00000362985 107 ntBASIC1.91□□□□□ -2.1
CLIP2Q9UDT6 SNORD32B-201ENST00000364460 84 ntBASIC1.91□□□□□ -2.1
CLIP2Q9UDT6 RNU6-1317P-201ENST00000364582 104 ntBASIC1.91□□□□□ -2.1
CLIP2Q9UDT6 RNU6-214P-201ENST00000384130 107 ntBASIC1.91□□□□□ -2.1
CLIP2Q9UDT6 RNU6-708P-201ENST00000384217 107 ntBASIC1.91□□□□□ -2.1
CLIP2Q9UDT6 Y_RNA.533-201ENST00000384596 114 ntBASIC1.91□□□□□ -2.1
CLIP2Q9UDT6 RN7SKP61-201ENST00000410642 295 ntBASIC1.91□□□□□ -2.1
CLIP2Q9UDT6 MTCYBP10-201ENST00000424905 650 ntBASIC1.91□□□□□ -2.1
CLIP2Q9UDT6 AL031274.1-201ENST00000450334 232 ntBASIC1.91□□□□□ -2.1
CLIP2Q9UDT6 SNORA25.10-201ENST00000515926 124 ntBASIC1.91□□□□□ -2.1
CLIP2Q9UDT6 RNU6-635P-201ENST00000516651 102 ntBASIC1.91□□□□□ -2.1
CLIP2Q9UDT6 RNU6-965P-201ENST00000516721 96 ntBASIC1.91□□□□□ -2.1
CLIP2Q9UDT6 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
CLIP2Q9UDT6 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.91□□□□□ -2.1
CLIP2Q9UDT6 AC138305.3-201ENST00000624988 240 ntBASIC1.91□□□□□ -2.1
CLIP2Q9UDT6 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.91□□□□□ -2.1
CLIP2Q9UDT6 RNU4-15P-201ENST00000362613 141 ntBASIC1.9□□□□□ -2.11
CLIP2Q9UDT6 Y_RNA.222-201ENST00000364264 102 ntBASIC1.9□□□□□ -2.11
CLIP2Q9UDT6 SNORD32A-201ENST00000364805 84 ntBASIC1.9□□□□□ -2.11
CLIP2Q9UDT6 RNU6-827P-201ENST00000365553 106 ntBASIC1.9□□□□□ -2.11
CLIP2Q9UDT6 Y_RNA.396-201ENST00000383949 103 ntBASIC1.9□□□□□ -2.11
CLIP2Q9UDT6 Y_RNA.452-201ENST00000384202 108 ntBASIC1.9□□□□□ -2.11
CLIP2Q9UDT6 Y_RNA.455-201ENST00000384230 98 ntBASIC1.9□□□□□ -2.11
CLIP2Q9UDT6 SNORA67.5-201ENST00000391036 107 ntBASIC1.9□□□□□ -2.11
CLIP2Q9UDT6 RNU6-823P-201ENST00000391042 103 ntBASIC1.9□□□□□ -2.11
CLIP2Q9UDT6 RNU4-62P-201ENST00000410125 130 ntBASIC1.9□□□□□ -2.11
CLIP2Q9UDT6 RNU6-174P-201ENST00000410406 106 ntBASIC1.9□□□□□ -2.11
CLIP2Q9UDT6 AC078809.1-201ENST00000427601 140 ntBASIC1.9□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 119.7 ms