Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 RNU6-1266P-201ENST00000362794 105 ntBASIC0.07□□□□□ -2.4
VPS29Q9UBQ0 SNORD114-23-201ENST00000363536 72 ntBASIC0.07□□□□□ -2.4
VPS29Q9UBQ0 RNU6-1286P-201ENST00000383871 107 ntBASIC0.07□□□□□ -2.4
VPS29Q9UBQ0 RNU6-74P-201ENST00000384235 107 ntBASIC0.07□□□□□ -2.4
VPS29Q9UBQ0 SNORD105-201ENST00000386910 85 ntBASIC0.07□□□□□ -2.4
VPS29Q9UBQ0 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.07□□□□□ -2.4
VPS29Q9UBQ0 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC0.07□□□□□ -2.4
VPS29Q9UBQ0 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC0.07□□□□□ -2.4
VPS29Q9UBQ0 AL512286.1-201ENST00000439244 400 ntBASIC0.07□□□□□ -2.4
VPS29Q9UBQ0 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC0.07□□□□□ -2.4
VPS29Q9UBQ0 RNU2-46P-201ENST00000517038 113 ntBASIC0.07□□□□□ -2.4
VPS29Q9UBQ0 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC0.07□□□□□ -2.4
VPS29Q9UBQ0 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC0.07□□□□□ -2.4
VPS29Q9UBQ0 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC0.07□□□□□ -2.4
VPS29Q9UBQ0 MIR4703-201ENST00000577728 79 ntBASIC0.07□□□□□ -2.4
VPS29Q9UBQ0 MIR3941-201ENST00000582572 103 ntBASIC0.07□□□□□ -2.4
VPS29Q9UBQ0 7SK.7-201ENST00000603504 247 ntBASIC0.07□□□□□ -2.4
VPS29Q9UBQ0 AC122133.1-201ENST00000613964 233 ntBASIC0.07□□□□□ -2.4
VPS29Q9UBQ0 uc_338.11-201ENST00000619132 160 ntBASIC0.07□□□□□ -2.4
VPS29Q9UBQ0 MTND4P9-201ENST00000507819 1346 ntBASIC0.07□□□□□ -2.4
VPS29Q9UBQ0 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC0.06□□□□□ -2.4
VPS29Q9UBQ0 RNU5F-7P-201ENST00000363696 115 ntBASIC0.06□□□□□ -2.4
VPS29Q9UBQ0 MIR1295A-201ENST00000408463 79 ntBASIC0.06□□□□□ -2.4
VPS29Q9UBQ0 MTCO2P34-201ENST00000421994 607 ntBASIC0.06□□□□□ -2.4
VPS29Q9UBQ0 RPS29P27-201ENST00000463711 170 ntBASIC0.06□□□□□ -2.4
VPS29Q9UBQ0 AP000870.1-201ENST00000472927 406 ntBASIC0.06□□□□□ -2.4
VPS29Q9UBQ0 AC105313.1-201ENST00000509121 353 ntBASIC0.06□□□□□ -2.4
VPS29Q9UBQ0 RNU7-28P-201ENST00000516759 62 ntBASIC0.06□□□□□ -2.4
VPS29Q9UBQ0 RNU2-56P-201ENST00000516826 190 ntBASIC0.06□□□□□ -2.4
VPS29Q9UBQ0 AP003716.2-201ENST00000528260 108 ntBASIC0.06□□□□□ -2.4
VPS29Q9UBQ0 AC018645.2-201ENST00000609151 472 ntBASIC0.06□□□□□ -2.4
VPS29Q9UBQ0 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.05□□□□□ -2.4
VPS29Q9UBQ0 MIR526A1-201ENST00000384897 85 ntBASIC0.05□□□□□ -2.4
VPS29Q9UBQ0 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC0.05□□□□□ -2.4
VPS29Q9UBQ0 RPL31P35-201ENST00000431058 377 ntBASIC0.05□□□□□ -2.4
VPS29Q9UBQ0 SCARNA18-201ENST00000459004 134 ntBASIC0.05□□□□□ -2.4
VPS29Q9UBQ0 AC010469.2-201ENST00000496412 480 ntBASIC0.05□□□□□ -2.4
VPS29Q9UBQ0 RNU6-430P-201ENST00000517078 107 ntBASIC0.05□□□□□ -2.4
VPS29Q9UBQ0 MTND2P32-201ENST00000521584 1038 ntBASIC0.05□□□□□ -2.4
VPS29Q9UBQ0 FRG2DP-202ENST00000566967 323 ntBASIC0.05□□□□□ -2.4
VPS29Q9UBQ0 MIR4509-3-201ENST00000578671 94 ntBASIC0.05□□□□□ -2.4
VPS29Q9UBQ0 MIR4431-201ENST00000579990 94 ntBASIC0.05□□□□□ -2.4
VPS29Q9UBQ0 MIR4509-2-201ENST00000583920 94 ntBASIC0.05□□□□□ -2.4
VPS29Q9UBQ0 MIR4438-201ENST00000585271 93 ntBASIC0.05□□□□□ -2.4
VPS29Q9UBQ0 SNORD11B-201ENST00000607707 90 ntBASIC0.05□□□□□ -2.4
VPS29Q9UBQ0 MIR4509-1-201ENST00000618224 94 ntBASIC0.05□□□□□ -2.4
VPS29Q9UBQ0 MIR6079-201ENST00000635807 62 ntBASIC0.05□□□□□ -2.4
VPS29Q9UBQ0 Y_RNA.399-201ENST00000383955 105 ntBASIC0.04□□□□□ -2.4
VPS29Q9UBQ0 MIR1827-201ENST00000408549 66 ntBASIC0.04□□□□□ -2.4
VPS29Q9UBQ0 MIR1185-1-201ENST00000408598 86 ntBASIC0.04□□□□□ -2.4
VPS29Q9UBQ0 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC0.04□□□□□ -2.4
VPS29Q9UBQ0 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC0.04□□□□□ -2.4
VPS29Q9UBQ0 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.04□□□□□ -2.4
VPS29Q9UBQ0 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC0.04□□□□□ -2.4
VPS29Q9UBQ0 RNU6-58P-201ENST00000517143 103 ntBASIC0.04□□□□□ -2.4
VPS29Q9UBQ0 AC087854.1-201ENST00000519706 414 ntBASIC0.04□□□□□ -2.4
VPS29Q9UBQ0 AP003072.2-201ENST00000527756 676 ntBASIC0.04□□□□□ -2.4
VPS29Q9UBQ0 MTND4P4-201ENST00000439033 1366 ntBASIC0.04□□□□□ -2.4
VPS29Q9UBQ0 ZNF204P-201ENST00000416749 2397 ntBASIC0.03□□□□□ -2.4
VPS29Q9UBQ0 AC005592.1-201ENST00000566527 1640 ntBASIC0.03□□□□□ -2.4
VPS29Q9UBQ0 MIR103A1-201ENST00000362165 78 ntBASIC0.03□□□□□ -2.4
VPS29Q9UBQ0 SNORA25.3-201ENST00000363205 127 ntBASIC0.03□□□□□ -2.4
VPS29Q9UBQ0 RNU6-1097P-201ENST00000363586 107 ntBASIC0.03□□□□□ -2.4
VPS29Q9UBQ0 RNU6-1297P-201ENST00000384415 104 ntBASIC0.03□□□□□ -2.4
VPS29Q9UBQ0 RNA5SP219-201ENST00000390940 113 ntBASIC0.03□□□□□ -2.4
VPS29Q9UBQ0 SNORA40.4-201ENST00000390971 128 ntBASIC0.03□□□□□ -2.4
VPS29Q9UBQ0 MIR1185-2-201ENST00000408687 86 ntBASIC0.03□□□□□ -2.4
VPS29Q9UBQ0 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC0.03□□□□□ -2.4
VPS29Q9UBQ0 MTND3P9-201ENST00000429526 346 ntBASIC0.03□□□□□ -2.4
VPS29Q9UBQ0 RNU7-167P-201ENST00000459160 62 ntBASIC0.03□□□□□ -2.4
VPS29Q9UBQ0 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC0.03□□□□□ -2.4
VPS29Q9UBQ0 AF235103.2-201ENST00000525753 346 ntBASIC0.03□□□□□ -2.4
VPS29Q9UBQ0 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC0.03□□□□□ -2.4
VPS29Q9UBQ0 RMST_3.1-201ENST00000611651 109 ntBASIC0.03□□□□□ -2.4
VPS29Q9UBQ0 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC0.03□□□□□ -2.4
VPS29Q9UBQ0 Y_RNA.336-201ENST00000365307 109 ntBASIC0.02□□□□□ -2.41
VPS29Q9UBQ0 MIR598-201ENST00000384868 97 ntBASIC0.02□□□□□ -2.41
VPS29Q9UBQ0 SNORD73A-201ENST00000386062 65 ntBASIC0.02□□□□□ -2.41
VPS29Q9UBQ0 SNORD111-201ENST00000408139 94 ntBASIC0.02□□□□□ -2.41
VPS29Q9UBQ0 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC0.02□□□□□ -2.41
VPS29Q9UBQ0 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC0.02□□□□□ -2.41
VPS29Q9UBQ0 MRPS10P1-201ENST00000448483 130 ntBASIC0.02□□□□□ -2.41
VPS29Q9UBQ0 MTCO2P18-201ENST00000457151 658 ntBASIC0.02□□□□□ -2.41
VPS29Q9UBQ0 RNU6-1037P-201ENST00000459571 107 ntBASIC0.02□□□□□ -2.41
VPS29Q9UBQ0 AF186996.7-201ENST00000492781 209 ntBASIC0.02□□□□□ -2.41
VPS29Q9UBQ0 AC105417.1-201ENST00000514691 285 ntBASIC0.02□□□□□ -2.41
VPS29Q9UBQ0 AC036111.3-201ENST00000526389 112 ntBASIC0.02□□□□□ -2.41
VPS29Q9UBQ0 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC0.02□□□□□ -2.41
VPS29Q9UBQ0 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC0.02□□□□□ -2.41
VPS29Q9UBQ0 MIR98-201ENST00000606724 119 ntBASIC0.02□□□□□ -2.41
VPS29Q9UBQ0 AC100812.1-201ENST00000607622 580 ntBASIC0.02□□□□□ -2.41
VPS29Q9UBQ0 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.02□□□□□ -2.41
VPS29Q9UBQ0 AC007742.2-201ENST00000618226 398 ntBASIC0.02□□□□□ -2.41
VPS29Q9UBQ0 AC137590.2-201ENST00000619709 240 ntBASIC0.02□□□□□ -2.41
VPS29Q9UBQ0 AC008133.2-201ENST00000624540 351 ntBASIC0.02□□□□□ -2.41
VPS29Q9UBQ0 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.01□□□□□ -2.41
VPS29Q9UBQ0 MIRLET7C-201ENST00000362160 84 ntBASIC0.01□□□□□ -2.41
VPS29Q9UBQ0 Y_RNA.122-201ENST00000363331 96 ntBASIC0.01□□□□□ -2.41
VPS29Q9UBQ0 RNU6-108P-201ENST00000365558 107 ntBASIC0.01□□□□□ -2.41
VPS29Q9UBQ0 RNU6-1105P-201ENST00000384774 107 ntBASIC0.01□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms