Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC1.84□□□□□ -2.12
NDE1Q9NXR1 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.12
NDE1Q9NXR1 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
NDE1Q9NXR1 AC091812.1-201ENST00000432235 1948 ntBASIC1.83□□□□□ -2.12
NDE1Q9NXR1 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
NDE1Q9NXR1 Y_RNA.28-201ENST00000362554 111 ntBASIC1.83□□□□□ -2.12
NDE1Q9NXR1 Y_RNA.39-201ENST00000362620 98 ntBASIC1.83□□□□□ -2.12
NDE1Q9NXR1 SNORD87-201ENST00000364849 89 ntBASIC1.83□□□□□ -2.12
NDE1Q9NXR1 RNU6-1227P-201ENST00000383981 107 ntBASIC1.83□□□□□ -2.12
NDE1Q9NXR1 RNU6-281P-201ENST00000384212 103 ntBASIC1.83□□□□□ -2.12
NDE1Q9NXR1 RNU6-318P-201ENST00000384283 103 ntBASIC1.83□□□□□ -2.12
NDE1Q9NXR1 RNU1-148P-201ENST00000384472 162 ntBASIC1.83□□□□□ -2.12
NDE1Q9NXR1 RNU6-1011P-201ENST00000384668 107 ntBASIC1.83□□□□□ -2.12
NDE1Q9NXR1 AL033519.2-201ENST00000403958 392 ntBASIC1.83□□□□□ -2.12
NDE1Q9NXR1 MIR1302-11-201ENST00000408051 138 ntBASIC1.83□□□□□ -2.12
NDE1Q9NXR1 MIR1302-9-201ENST00000408365 138 ntBASIC1.83□□□□□ -2.12
NDE1Q9NXR1 MIR1302-10-201ENST00000408734 138 ntBASIC1.83□□□□□ -2.12
NDE1Q9NXR1 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC1.83□□□□□ -2.12
NDE1Q9NXR1 AC005534.2-201ENST00000431047 433 ntBASIC1.83□□□□□ -2.12
NDE1Q9NXR1 HMGN2P18-201ENST00000450680 270 ntBASIC1.83□□□□□ -2.12
NDE1Q9NXR1 RPS23P5-201ENST00000495419 428 ntBASIC1.83□□□□□ -2.12
NDE1Q9NXR1 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC1.83□□□□□ -2.12
NDE1Q9NXR1 RNA5SP490-201ENST00000517141 136 ntBASIC1.83□□□□□ -2.12
NDE1Q9NXR1 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC1.83□□□□□ -2.12
NDE1Q9NXR1 AC026470.2-201ENST00000561492 181 ntBASIC1.83□□□□□ -2.12
NDE1Q9NXR1 SNRPGP20-201ENST00000604477 205 ntBASIC1.83□□□□□ -2.12
NDE1Q9NXR1 MIR1302-2-201ENST00000607096 138 ntBASIC1.83□□□□□ -2.12
NDE1Q9NXR1 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC1.83□□□□□ -2.12
NDE1Q9NXR1 AC083806.3-201ENST00000614016 455 ntBASIC1.83□□□□□ -2.12
NDE1Q9NXR1 AL357075.2-201ENST00000614906 189 ntBASIC1.83□□□□□ -2.12
NDE1Q9NXR1 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.83□□□□□ -2.12
NDE1Q9NXR1 U4atac.1-201ENST00000618345 95 ntBASIC1.83□□□□□ -2.12
NDE1Q9NXR1 AL606534.2-204ENST00000635008 178 ntBASIC1.83□□□□□ -2.12
NDE1Q9NXR1 SNORA16.1-201ENST00000364597 132 ntBASIC1.82□□□□□ -2.12
NDE1Q9NXR1 Y_RNA.415-201ENST00000384012 112 ntBASIC1.82□□□□□ -2.12
NDE1Q9NXR1 RNU6-926P-201ENST00000384075 107 ntBASIC1.82□□□□□ -2.12
NDE1Q9NXR1 RNA5SP504-201ENST00000410676 117 ntBASIC1.82□□□□□ -2.12
NDE1Q9NXR1 RPL31P63-201ENST00000422565 375 ntBASIC1.82□□□□□ -2.12
NDE1Q9NXR1 AC009237.7-201ENST00000447357 229 ntBASIC1.82□□□□□ -2.12
NDE1Q9NXR1 PRELID3BP1-201ENST00000457142 540 ntBASIC1.82□□□□□ -2.12
NDE1Q9NXR1 RNU1-41P-201ENST00000516161 162 ntBASIC1.82□□□□□ -2.12
NDE1Q9NXR1 RNU1-48P-201ENST00000516400 162 ntBASIC1.82□□□□□ -2.12
NDE1Q9NXR1 RNU6-1198P-201ENST00000516904 67 ntBASIC1.82□□□□□ -2.12
NDE1Q9NXR1 AC034114.1-201ENST00000520293 285 ntBASIC1.82□□□□□ -2.12
NDE1Q9NXR1 HSBP1P1-201ENST00000555205 166 ntBASIC1.82□□□□□ -2.12
NDE1Q9NXR1 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.82□□□□□ -2.12
NDE1Q9NXR1 AC233702.2-202ENST00000562547 291 ntBASIC1.82□□□□□ -2.12
NDE1Q9NXR1 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.82□□□□□ -2.12
NDE1Q9NXR1 MIR5188-201ENST00000583467 113 ntBASIC1.82□□□□□ -2.12
NDE1Q9NXR1 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.82□□□□□ -2.12
NDE1Q9NXR1 MPP6-209ENST00000625307 126 ntTSL 5 BASIC1.82□□□□□ -2.12
NDE1Q9NXR1 AP006437.1-201ENST00000641440 3685 ntBASIC1.82□□□□□ -2.12
NDE1Q9NXR1 MTND5P6-201ENST00000422338 1798 ntBASIC1.82□□□□□ -2.12
NDE1Q9NXR1 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.82□□□□□ -2.12
NDE1Q9NXR1 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.81□□□□□ -2.12
NDE1Q9NXR1 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
NDE1Q9NXR1 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
NDE1Q9NXR1 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.81□□□□□ -2.12
NDE1Q9NXR1 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.81□□□□□ -2.12
NDE1Q9NXR1 RNU6-1301P-201ENST00000362724 104 ntBASIC1.81□□□□□ -2.12
NDE1Q9NXR1 SNORD115-3-201ENST00000363100 82 ntBASIC1.81□□□□□ -2.12
NDE1Q9NXR1 RNU6-137P-201ENST00000363680 108 ntBASIC1.81□□□□□ -2.12
NDE1Q9NXR1 RNU6-450P-201ENST00000364654 107 ntBASIC1.81□□□□□ -2.12
NDE1Q9NXR1 RNU1-115P-201ENST00000365329 160 ntBASIC1.81□□□□□ -2.12
NDE1Q9NXR1 MIR1262-201ENST00000408276 93 ntBASIC1.81□□□□□ -2.12
NDE1Q9NXR1 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC1.81□□□□□ -2.12
NDE1Q9NXR1 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC1.81□□□□□ -2.12
NDE1Q9NXR1 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.81□□□□□ -2.12
NDE1Q9NXR1 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.81□□□□□ -2.12
NDE1Q9NXR1 AC093259.1-201ENST00000509755 300 ntBASIC1.81□□□□□ -2.12
NDE1Q9NXR1 RRN3P3-201ENST00000549207 578 ntBASIC1.81□□□□□ -2.12
NDE1Q9NXR1 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC1.81□□□□□ -2.12
NDE1Q9NXR1 MIR3618-201ENST00000580330 88 ntBASIC1.81□□□□□ -2.12
NDE1Q9NXR1 AC016925.2-201ENST00000605108 242 ntBASIC1.81□□□□□ -2.12
NDE1Q9NXR1 AC010999.1-201ENST00000611856 324 ntBASIC1.81□□□□□ -2.12
NDE1Q9NXR1 Y_RNA.783-201ENST00000613546 102 ntBASIC1.81□□□□□ -2.12
NDE1Q9NXR1 AC011476.5-201ENST00000615594 130 ntBASIC1.81□□□□□ -2.12
NDE1Q9NXR1 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.81□□□□□ -2.12
NDE1Q9NXR1 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.81□□□□□ -2.12
NDE1Q9NXR1 MTND5P35-201ENST00000557537 1720 ntBASIC1.8□□□□□ -2.12
NDE1Q9NXR1 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.8□□□□□ -2.12
NDE1Q9NXR1 Y_RNA.179-201ENST00000363844 90 ntBASIC1.8□□□□□ -2.12
NDE1Q9NXR1 RNU6-280P-201ENST00000364145 104 ntBASIC1.8□□□□□ -2.12
NDE1Q9NXR1 RNU6-245P-201ENST00000384020 107 ntBASIC1.8□□□□□ -2.12
NDE1Q9NXR1 RNU6-793P-201ENST00000384233 104 ntBASIC1.8□□□□□ -2.12
NDE1Q9NXR1 RNU6-1026P-201ENST00000384465 108 ntBASIC1.8□□□□□ -2.12
NDE1Q9NXR1 MIR329-1-201ENST00000385028 80 ntBASIC1.8□□□□□ -2.12
NDE1Q9NXR1 AL512604.1-201ENST00000404812 257 ntBASIC1.8□□□□□ -2.12
NDE1Q9NXR1 MIR320B2-201ENST00000408479 138 ntBASIC1.8□□□□□ -2.12
NDE1Q9NXR1 RN7SKP192-201ENST00000411291 327 ntBASIC1.8□□□□□ -2.12
NDE1Q9NXR1 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC1.8□□□□□ -2.12
NDE1Q9NXR1 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC1.8□□□□□ -2.12
NDE1Q9NXR1 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.8□□□□□ -2.12
NDE1Q9NXR1 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.8□□□□□ -2.12
NDE1Q9NXR1 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.8□□□□□ -2.12
NDE1Q9NXR1 RNU6-988P-201ENST00000519081 107 ntBASIC1.8□□□□□ -2.12
NDE1Q9NXR1 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC1.8□□□□□ -2.12
NDE1Q9NXR1 VN1R91P-201ENST00000594377 169 ntBASIC1.8□□□□□ -2.12
NDE1Q9NXR1 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.8□□□□□ -2.12
NDE1Q9NXR1 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.8□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 121.4 ms