Protein–RNA interactions for Protein: Q9NWD8

TMEM248, Transmembrane protein 248, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248Q9NWD8 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
TMEM248Q9NWD8 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
TMEM248Q9NWD8 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.34□□□□□ -2.03
TMEM248Q9NWD8 Y_RNA.26-201ENST00000362539 101 ntBASIC2.34□□□□□ -2.03
TMEM248Q9NWD8 SNORD31B-201ENST00000364977 69 ntBASIC2.34□□□□□ -2.03
TMEM248Q9NWD8 RNU6-438P-201ENST00000365561 103 ntBASIC2.34□□□□□ -2.03
TMEM248Q9NWD8 Y_RNA.458-201ENST00000384240 102 ntBASIC2.34□□□□□ -2.03
TMEM248Q9NWD8 MRPL35P1-201ENST00000404272 572 ntBASIC2.34□□□□□ -2.03
TMEM248Q9NWD8 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.34□□□□□ -2.03
TMEM248Q9NWD8 HMGN2P18-201ENST00000450680 270 ntBASIC2.34□□□□□ -2.03
TMEM248Q9NWD8 HMGB3P3-201ENST00000510526 400 ntBASIC2.34□□□□□ -2.03
TMEM248Q9NWD8 AC067942.3-201ENST00000512025 362 ntBASIC2.34□□□□□ -2.03
TMEM248Q9NWD8 RNA5SP490-201ENST00000517141 136 ntBASIC2.34□□□□□ -2.03
TMEM248Q9NWD8 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC2.34□□□□□ -2.03
TMEM248Q9NWD8 MIR4658-201ENST00000584344 65 ntBASIC2.34□□□□□ -2.03
TMEM248Q9NWD8 Y_RNA.772-201ENST00000606692 102 ntBASIC2.34□□□□□ -2.03
TMEM248Q9NWD8 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.34□□□□□ -2.03
TMEM248Q9NWD8 AC008873.1-201ENST00000625051 138 ntBASIC2.34□□□□□ -2.03
TMEM248Q9NWD8 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC2.34□□□□□ -2.03
TMEM248Q9NWD8 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.34□□□□□ -2.04
TMEM248Q9NWD8 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.34□□□□□ -2.04
TMEM248Q9NWD8 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.34□□□□□ -2.04
TMEM248Q9NWD8 RNU6-1305P-201ENST00000364353 104 ntBASIC2.33□□□□□ -2.04
TMEM248Q9NWD8 RNU6-702P-201ENST00000364982 107 ntBASIC2.33□□□□□ -2.04
TMEM248Q9NWD8 RNU6-806P-201ENST00000365147 105 ntBASIC2.33□□□□□ -2.04
TMEM248Q9NWD8 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC2.33□□□□□ -2.04
TMEM248Q9NWD8 Y_RNA.401-201ENST00000383965 117 ntBASIC2.33□□□□□ -2.04
TMEM248Q9NWD8 Y_RNA.415-201ENST00000384012 112 ntBASIC2.33□□□□□ -2.04
TMEM248Q9NWD8 SNORA67.2-201ENST00000384300 149 ntBASIC2.33□□□□□ -2.04
TMEM248Q9NWD8 MIR586-201ENST00000385035 97 ntBASIC2.33□□□□□ -2.04
TMEM248Q9NWD8 MIR1302-3-201ENST00000408128 138 ntBASIC2.33□□□□□ -2.04
TMEM248Q9NWD8 ELOCP20-201ENST00000422460 345 ntBASIC2.33□□□□□ -2.04
TMEM248Q9NWD8 RPEP5-201ENST00000441137 268 ntBASIC2.33□□□□□ -2.04
TMEM248Q9NWD8 DYNLT3P2-201ENST00000442517 295 ntBASIC2.33□□□□□ -2.04
TMEM248Q9NWD8 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC2.33□□□□□ -2.04
TMEM248Q9NWD8 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.33□□□□□ -2.04
TMEM248Q9NWD8 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC2.33□□□□□ -2.04
TMEM248Q9NWD8 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.33□□□□□ -2.04
TMEM248Q9NWD8 RPL23AP94-201ENST00000512518 302 ntBASIC2.33□□□□□ -2.04
TMEM248Q9NWD8 RNU6-397P-201ENST00000516226 104 ntBASIC2.33□□□□□ -2.04
TMEM248Q9NWD8 AC110588.1-201ENST00000559699 137 ntBASIC2.33□□□□□ -2.04
TMEM248Q9NWD8 AC233702.2-202ENST00000562547 291 ntBASIC2.33□□□□□ -2.04
TMEM248Q9NWD8 MYL12BP1-201ENST00000569826 507 ntBASIC2.33□□□□□ -2.04
TMEM248Q9NWD8 MIR4435-1-201ENST00000582552 80 ntBASIC2.33□□□□□ -2.04
TMEM248Q9NWD8 MIR4753-201ENST00000585119 83 ntBASIC2.33□□□□□ -2.04
TMEM248Q9NWD8 AL357075.2-201ENST00000614906 189 ntBASIC2.33□□□□□ -2.04
TMEM248Q9NWD8 AL590808.1-201ENST00000618696 141 ntBASIC2.33□□□□□ -2.04
TMEM248Q9NWD8 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
TMEM248Q9NWD8 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.32□□□□□ -2.04
TMEM248Q9NWD8 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
TMEM248Q9NWD8 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.32□□□□□ -2.04
TMEM248Q9NWD8 RNU6-545P-201ENST00000362681 104 ntBASIC2.32□□□□□ -2.04
TMEM248Q9NWD8 Y_RNA.214-201ENST00000364201 112 ntBASIC2.32□□□□□ -2.04
TMEM248Q9NWD8 Y_RNA.222-201ENST00000364264 102 ntBASIC2.32□□□□□ -2.04
TMEM248Q9NWD8 Y_RNA.396-201ENST00000383949 103 ntBASIC2.32□□□□□ -2.04
TMEM248Q9NWD8 Y_RNA.439-201ENST00000384119 94 ntBASIC2.32□□□□□ -2.04
TMEM248Q9NWD8 MIR1283-1-201ENST00000408494 87 ntBASIC2.32□□□□□ -2.04
TMEM248Q9NWD8 RNA5SP504-201ENST00000410676 117 ntBASIC2.32□□□□□ -2.04
TMEM248Q9NWD8 AC114982.1-201ENST00000469402 321 ntBASIC2.32□□□□□ -2.04
TMEM248Q9NWD8 NDUFA5P6-201ENST00000542110 379 ntBASIC2.32□□□□□ -2.04
TMEM248Q9NWD8 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.32□□□□□ -2.04
TMEM248Q9NWD8 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.32□□□□□ -2.04
TMEM248Q9NWD8 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.32□□□□□ -2.04
TMEM248Q9NWD8 SNORD53-201ENST00000579969 78 ntBASIC2.32□□□□□ -2.04
TMEM248Q9NWD8 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC2.32□□□□□ -2.04
TMEM248Q9NWD8 AC011476.5-201ENST00000615594 130 ntBASIC2.32□□□□□ -2.04
TMEM248Q9NWD8 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC2.32□□□□□ -2.04
TMEM248Q9NWD8 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.32□□□□□ -2.04
TMEM248Q9NWD8 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
TMEM248Q9NWD8 U3.8-201ENST00000363675 217 ntBASIC2.31□□□□□ -2.04
TMEM248Q9NWD8 SNORD87-201ENST00000364849 89 ntBASIC2.31□□□□□ -2.04
TMEM248Q9NWD8 RNU6-472P-201ENST00000384299 107 ntBASIC2.31□□□□□ -2.04
TMEM248Q9NWD8 Y_RNA.498-201ENST00000384460 102 ntBASIC2.31□□□□□ -2.04
TMEM248Q9NWD8 RNU6-130P-201ENST00000411112 103 ntBASIC2.31□□□□□ -2.04
TMEM248Q9NWD8 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2.31□□□□□ -2.04
TMEM248Q9NWD8 TRAPPC2P8-201ENST00000440676 396 ntBASIC2.31□□□□□ -2.04
TMEM248Q9NWD8 AC073910.1-201ENST00000445047 438 ntBASIC2.31□□□□□ -2.04
TMEM248Q9NWD8 AC074290.1-201ENST00000448883 135 ntBASIC2.31□□□□□ -2.04
TMEM248Q9NWD8 AL137159.1-201ENST00000452808 512 ntBASIC2.31□□□□□ -2.04
TMEM248Q9NWD8 AC016925.1-201ENST00000458303 298 ntBASIC2.31□□□□□ -2.04
TMEM248Q9NWD8 RNU6-625P-201ENST00000459412 107 ntBASIC2.31□□□□□ -2.04
TMEM248Q9NWD8 HMGN2P9-201ENST00000476875 229 ntBASIC2.31□□□□□ -2.04
TMEM248Q9NWD8 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.31□□□□□ -2.04
TMEM248Q9NWD8 RNU6-408P-201ENST00000515910 100 ntBASIC2.31□□□□□ -2.04
TMEM248Q9NWD8 RNU6-991P-201ENST00000516168 107 ntBASIC2.31□□□□□ -2.04
TMEM248Q9NWD8 AC018448.1-201ENST00000552843 316 ntBASIC2.31□□□□□ -2.04
TMEM248Q9NWD8 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
TMEM248Q9NWD8 MTND5P6-201ENST00000422338 1798 ntBASIC2.31□□□□□ -2.04
TMEM248Q9NWD8 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
TMEM248Q9NWD8 Y_RNA.64-201ENST00000362845 102 ntBASIC2.3□□□□□ -2.04
TMEM248Q9NWD8 Y_RNA.105-201ENST00000363182 111 ntBASIC2.3□□□□□ -2.04
TMEM248Q9NWD8 MIR221-201ENST00000385135 110 ntBASIC2.3□□□□□ -2.04
TMEM248Q9NWD8 RNA5SP508-201ENST00000411327 119 ntBASIC2.3□□□□□ -2.04
TMEM248Q9NWD8 ELOCP21-201ENST00000412558 336 ntBASIC2.3□□□□□ -2.04
TMEM248Q9NWD8 SRIP3-201ENST00000413200 219 ntBASIC2.3□□□□□ -2.04
TMEM248Q9NWD8 NDUFB4P10-201ENST00000452541 359 ntBASIC2.3□□□□□ -2.04
TMEM248Q9NWD8 RPL26P26-201ENST00000480251 434 ntBASIC2.3□□□□□ -2.04
TMEM248Q9NWD8 AC093259.1-201ENST00000509755 300 ntBASIC2.3□□□□□ -2.04
TMEM248Q9NWD8 AC008413.1-201ENST00000511864 177 ntBASIC2.3□□□□□ -2.04
TMEM248Q9NWD8 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.3□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 174 ms