Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC3.33□□□□□ -1.88
SSU72Q9NP77 AC115115.1-201ENST00000449927 248 ntBASIC3.33□□□□□ -1.88
SSU72Q9NP77 RNU6-437P-201ENST00000459408 95 ntBASIC3.33□□□□□ -1.88
SSU72Q9NP77 RN7SL330P-201ENST00000469709 307 ntBASIC3.33□□□□□ -1.88
SSU72Q9NP77 AC092185.1-201ENST00000491371 97 ntBASIC3.33□□□□□ -1.88
SSU72Q9NP77 RPL23AP54-201ENST00000495129 419 ntBASIC3.33□□□□□ -1.88
SSU72Q9NP77 RNA5SP20-201ENST00000515976 84 ntBASIC3.33□□□□□ -1.88
SSU72Q9NP77 AC027419.1-201ENST00000522976 328 ntBASIC3.33□□□□□ -1.88
SSU72Q9NP77 PARP1P2-201ENST00000556806 195 ntBASIC3.33□□□□□ -1.88
SSU72Q9NP77 MIR4765-201ENST00000585007 77 ntBASIC3.33□□□□□ -1.88
SSU72Q9NP77 AL670379.2-201ENST00000604983 252 ntBASIC3.33□□□□□ -1.88
SSU72Q9NP77 U7.2-201ENST00000607576 63 ntBASIC3.33□□□□□ -1.88
SSU72Q9NP77 MIR7851-201ENST00000610611 160 ntBASIC3.33□□□□□ -1.88
SSU72Q9NP77 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC3.33□□□□□ -1.88
SSU72Q9NP77 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.33□□□□□ -1.88
SSU72Q9NP77 RNU6-915P-201ENST00000364943 103 ntBASIC3.32□□□□□ -1.88
SSU72Q9NP77 RNU6-484P-201ENST00000384016 107 ntBASIC3.32□□□□□ -1.88
SSU72Q9NP77 Y_RNA.587-201ENST00000391210 103 ntBASIC3.32□□□□□ -1.88
SSU72Q9NP77 MIR1294-201ENST00000408503 142 ntBASIC3.32□□□□□ -1.88
SSU72Q9NP77 RNA5SP511-201ENST00000410487 115 ntBASIC3.32□□□□□ -1.88
SSU72Q9NP77 RNU6-57P-201ENST00000411348 103 ntBASIC3.32□□□□□ -1.88
SSU72Q9NP77 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.32□□□□□ -1.88
SSU72Q9NP77 CYCSP4-201ENST00000429682 331 ntBASIC3.32□□□□□ -1.88
SSU72Q9NP77 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC3.32□□□□□ -1.88
SSU72Q9NP77 MIR378D2-201ENST00000580636 98 ntBASIC3.32□□□□□ -1.88
SSU72Q9NP77 MIR4753-201ENST00000585119 83 ntBASIC3.32□□□□□ -1.88
SSU72Q9NP77 AC023043.3-201ENST00000593113 385 ntBASIC3.32□□□□□ -1.88
SSU72Q9NP77 uc_338.1-201ENST00000612113 180 ntBASIC3.32□□□□□ -1.88
SSU72Q9NP77 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.32□□□□□ -1.88
SSU72Q9NP77 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
SSU72Q9NP77 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
SSU72Q9NP77 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC3.32□□□□□ -1.88
SSU72Q9NP77 MFSD8-236ENST00000641509 4050 ntBASIC3.32□□□□□ -1.88
SSU72Q9NP77 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
SSU72Q9NP77 AC093831.2-201ENST00000624393 3427 ntBASIC3.31□□□□□ -1.88
SSU72Q9NP77 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC3.31□□□□□ -1.88
SSU72Q9NP77 RNA5SP119-201ENST00000362715 117 ntBASIC3.31□□□□□ -1.88
SSU72Q9NP77 RNU6-271P-201ENST00000363858 105 ntBASIC3.31□□□□□ -1.88
SSU72Q9NP77 RNU6-978P-201ENST00000364371 103 ntBASIC3.31□□□□□ -1.88
SSU72Q9NP77 SNORD31B-201ENST00000364977 69 ntBASIC3.31□□□□□ -1.88
SSU72Q9NP77 RNA5SP283-201ENST00000365604 119 ntBASIC3.31□□□□□ -1.88
SSU72Q9NP77 AC068538.1-201ENST00000376856 336 ntBASIC3.31□□□□□ -1.88
SSU72Q9NP77 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC3.31□□□□□ -1.88
SSU72Q9NP77 SNORA56-201ENST00000383966 129 ntBASIC3.31□□□□□ -1.88
SSU72Q9NP77 MIR141-201ENST00000384975 95 ntBASIC3.31□□□□□ -1.88
SSU72Q9NP77 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.31□□□□□ -1.88
SSU72Q9NP77 RNA5SP229-201ENST00000410809 99 ntBASIC3.31□□□□□ -1.88
SSU72Q9NP77 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.31□□□□□ -1.88
SSU72Q9NP77 AC009969.1-201ENST00000438726 172 ntBASIC3.31□□□□□ -1.88
SSU72Q9NP77 TPT1P12-201ENST00000448968 492 ntBASIC3.31□□□□□ -1.88
SSU72Q9NP77 HMGN2P7-201ENST00000456186 273 ntBASIC3.31□□□□□ -1.88
SSU72Q9NP77 RNU7-116P-201ENST00000516940 62 ntBASIC3.31□□□□□ -1.88
SSU72Q9NP77 AC025647.1-201ENST00000517879 253 ntBASIC3.31□□□□□ -1.88
SSU72Q9NP77 AC015720.1-201ENST00000565251 277 ntBASIC3.31□□□□□ -1.88
SSU72Q9NP77 MIR6875-201ENST00000617506 72 ntBASIC3.31□□□□□ -1.88
SSU72Q9NP77 CR392039.5-201ENST00000623201 510 ntBASIC3.31□□□□□ -1.88
SSU72Q9NP77 AC002064.3-201ENST00000623448 346 ntBASIC3.31□□□□□ -1.88
SSU72Q9NP77 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.31□□□□□ -1.88
SSU72Q9NP77 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.31□□□□□ -1.88
SSU72Q9NP77 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.31□□□□□ -1.88
SSU72Q9NP77 AC008264.2-201ENST00000610193 3731 ntBASIC3.3□□□□□ -1.88
SSU72Q9NP77 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.3□□□□□ -1.88
SSU72Q9NP77 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.3□□□□□ -1.88
SSU72Q9NP77 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
SSU72Q9NP77 SNORA14A-201ENST00000364773 135 ntBASIC3.3□□□□□ -1.88
SSU72Q9NP77 DYNLT3P1-201ENST00000378574 347 ntBASIC3.3□□□□□ -1.88
SSU72Q9NP77 SNORA46-201ENST00000384762 135 ntBASIC3.3□□□□□ -1.88
SSU72Q9NP77 MIR767-201ENST00000390228 109 ntBASIC3.3□□□□□ -1.88
SSU72Q9NP77 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
SSU72Q9NP77 RNU6-1328P-201ENST00000410938 106 ntBASIC3.3□□□□□ -1.88
SSU72Q9NP77 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.3□□□□□ -1.88
SSU72Q9NP77 AC009220.1-201ENST00000451614 275 ntBASIC3.3□□□□□ -1.88
SSU72Q9NP77 AC083906.5-201ENST00000503722 328 ntBASIC3.3□□□□□ -1.88
SSU72Q9NP77 Y_RNA.712-201ENST00000517011 92 ntBASIC3.3□□□□□ -1.88
SSU72Q9NP77 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.3□□□□□ -1.88
SSU72Q9NP77 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.3□□□□□ -1.88
SSU72Q9NP77 RN7SL703P-201ENST00000578485 302 ntBASIC3.3□□□□□ -1.88
SSU72Q9NP77 MIR4286-201ENST00000580651 93 ntBASIC3.3□□□□□ -1.88
SSU72Q9NP77 RNA5SP196-201ENST00000625967 102 ntBASIC3.3□□□□□ -1.88
SSU72Q9NP77 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.3□□□□□ -1.88
SSU72Q9NP77 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
SSU72Q9NP77 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.3□□□□□ -1.88
SSU72Q9NP77 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
SSU72Q9NP77 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
SSU72Q9NP77 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
SSU72Q9NP77 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
SSU72Q9NP77 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.3□□□□□ -1.88
SSU72Q9NP77 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
SSU72Q9NP77 AC091564.4-201ENST00000533934 2194 ntBASIC3.29□□□□□ -1.88
SSU72Q9NP77 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.29□□□□□ -1.88
SSU72Q9NP77 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
SSU72Q9NP77 SNORD6-201ENST00000365444 73 ntBASIC3.29□□□□□ -1.88
SSU72Q9NP77 RNU6-418P-201ENST00000384035 107 ntBASIC3.29□□□□□ -1.88
SSU72Q9NP77 U8.11-201ENST00000384699 133 ntBASIC3.29□□□□□ -1.88
SSU72Q9NP77 RNY4P18-201ENST00000391107 89 ntBASIC3.29□□□□□ -1.88
SSU72Q9NP77 RNA5SP496-201ENST00000391240 109 ntBASIC3.29□□□□□ -1.88
SSU72Q9NP77 AL158823.1-201ENST00000418441 478 ntBASIC3.29□□□□□ -1.88
SSU72Q9NP77 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.29□□□□□ -1.88
SSU72Q9NP77 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC3.29□□□□□ -1.88
SSU72Q9NP77 AC016925.1-201ENST00000458303 298 ntBASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 130 ms