Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 AC104332.1-201ENST00000440471 797 ntBASIC0.14□□□□□ -2.39
KIAA1549Q9HCM3 MTCO2P3-201ENST00000442543 421 ntBASIC0.14□□□□□ -2.39
KIAA1549Q9HCM3 NDUFB4P10-201ENST00000452541 359 ntBASIC0.14□□□□□ -2.39
KIAA1549Q9HCM3 MTCO3P8-201ENST00000453691 755 ntBASIC0.14□□□□□ -2.39
KIAA1549Q9HCM3 RNU7-138P-201ENST00000459479 64 ntBASIC0.14□□□□□ -2.39
KIAA1549Q9HCM3 AC091874.1-201ENST00000511402 339 ntBASIC0.14□□□□□ -2.39
KIAA1549Q9HCM3 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC0.14□□□□□ -2.39
KIAA1549Q9HCM3 RNU7-12P-201ENST00000516030 62 ntBASIC0.14□□□□□ -2.39
KIAA1549Q9HCM3 AP001372.4-201ENST00000524889 472 ntBASIC0.14□□□□□ -2.39
KIAA1549Q9HCM3 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC0.14□□□□□ -2.39
KIAA1549Q9HCM3 AC011195.1-201ENST00000578177 177 ntBASIC0.14□□□□□ -2.39
KIAA1549Q9HCM3 AC004223.2-201ENST00000590309 544 ntBASIC0.14□□□□□ -2.39
KIAA1549Q9HCM3 AP000907.4-201ENST00000604143 237 ntBASIC0.14□□□□□ -2.39
KIAA1549Q9HCM3 SNORA28-201ENST00000606769 126 ntBASIC0.14□□□□□ -2.39
KIAA1549Q9HCM3 AL357075.2-201ENST00000614906 189 ntBASIC0.14□□□□□ -2.39
KIAA1549Q9HCM3 SNORA43.4-201ENST00000629559 138 ntBASIC0.14□□□□□ -2.39
KIAA1549Q9HCM3 RNU6-266P-201ENST00000364225 107 ntBASIC0.13□□□□□ -2.39
KIAA1549Q9HCM3 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.13□□□□□ -2.39
KIAA1549Q9HCM3 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC0.13□□□□□ -2.39
KIAA1549Q9HCM3 Y_RNA.412-201ENST00000384001 104 ntBASIC0.13□□□□□ -2.39
KIAA1549Q9HCM3 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC0.13□□□□□ -2.39
KIAA1549Q9HCM3 SNORD111-201ENST00000408139 94 ntBASIC0.13□□□□□ -2.39
KIAA1549Q9HCM3 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC0.13□□□□□ -2.39
KIAA1549Q9HCM3 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.13□□□□□ -2.39
KIAA1549Q9HCM3 RNU6-1037P-201ENST00000459571 107 ntBASIC0.13□□□□□ -2.39
KIAA1549Q9HCM3 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC0.13□□□□□ -2.39
KIAA1549Q9HCM3 SUB1P2-201ENST00000556401 297 ntBASIC0.13□□□□□ -2.39
KIAA1549Q9HCM3 MTND4P33-201ENST00000556706 766 ntBASIC0.13□□□□□ -2.39
KIAA1549Q9HCM3 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC0.13□□□□□ -2.39
KIAA1549Q9HCM3 AL391903.3-201ENST00000612158 163 ntBASIC0.13□□□□□ -2.39
KIAA1549Q9HCM3 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC0.13□□□□□ -2.39
KIAA1549Q9HCM3 RNU5F-7P-201ENST00000363696 115 ntBASIC0.12□□□□□ -2.39
KIAA1549Q9HCM3 RNU6-660P-201ENST00000364566 109 ntBASIC0.12□□□□□ -2.39
KIAA1549Q9HCM3 Y_RNA.367-201ENST00000365544 101 ntBASIC0.12□□□□□ -2.39
KIAA1549Q9HCM3 RNU6-533P-201ENST00000384144 107 ntBASIC0.12□□□□□ -2.39
KIAA1549Q9HCM3 SNORA67.2-201ENST00000384300 149 ntBASIC0.12□□□□□ -2.39
KIAA1549Q9HCM3 RNU6-636P-201ENST00000384598 107 ntBASIC0.12□□□□□ -2.39
KIAA1549Q9HCM3 SNORA12.1-201ENST00000390873 148 ntBASIC0.12□□□□□ -2.39
KIAA1549Q9HCM3 RNA5SP222-201ENST00000411039 105 ntBASIC0.12□□□□□ -2.39
KIAA1549Q9HCM3 MTND3P9-201ENST00000429526 346 ntBASIC0.12□□□□□ -2.39
KIAA1549Q9HCM3 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC0.12□□□□□ -2.39
KIAA1549Q9HCM3 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC0.12□□□□□ -2.39
KIAA1549Q9HCM3 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC0.12□□□□□ -2.39
KIAA1549Q9HCM3 RNU6-344P-201ENST00000516635 111 ntBASIC0.12□□□□□ -2.39
KIAA1549Q9HCM3 RNA5SP54-201ENST00000516951 92 ntBASIC0.12□□□□□ -2.39
KIAA1549Q9HCM3 AC091178.2-201ENST00000584401 117 ntBASIC0.12□□□□□ -2.39
KIAA1549Q9HCM3 MIR4438-201ENST00000585271 93 ntBASIC0.12□□□□□ -2.39
KIAA1549Q9HCM3 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.12□□□□□ -2.39
KIAA1549Q9HCM3 MIR6755-201ENST00000619993 66 ntBASIC0.12□□□□□ -2.39
KIAA1549Q9HCM3 AC068137.4-201ENST00000638485 296 ntBASIC0.12□□□□□ -2.39
KIAA1549Q9HCM3 ZNF204P-201ENST00000416749 2397 ntBASIC0.12□□□□□ -2.39
KIAA1549Q9HCM3 Y_RNA.178-201ENST00000363832 102 ntBASIC0.12□□□□□ -2.39
KIAA1549Q9HCM3 RNU6-517P-201ENST00000384362 110 ntBASIC0.12□□□□□ -2.39
KIAA1549Q9HCM3 MIR562-201ENST00000384894 95 ntBASIC0.12□□□□□ -2.39
KIAA1549Q9HCM3 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.12□□□□□ -2.39
KIAA1549Q9HCM3 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC0.12□□□□□ -2.39
KIAA1549Q9HCM3 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.12□□□□□ -2.39
KIAA1549Q9HCM3 AL133217.1-201ENST00000450980 425 ntBASIC0.12□□□□□ -2.39
KIAA1549Q9HCM3 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC0.12□□□□□ -2.39
KIAA1549Q9HCM3 AC093850.1-201ENST00000454121 251 ntBASIC0.12□□□□□ -2.39
KIAA1549Q9HCM3 RPS29P27-201ENST00000463711 170 ntBASIC0.12□□□□□ -2.39
KIAA1549Q9HCM3 AC022493.2-201ENST00000506122 481 ntBASIC0.12□□□□□ -2.39
KIAA1549Q9HCM3 RPL39P5-202ENST00000512505 151 ntBASIC0.12□□□□□ -2.39
KIAA1549Q9HCM3 AC097462.1-201ENST00000514125 324 ntBASIC0.12□□□□□ -2.39
KIAA1549Q9HCM3 Y_RNA.681-201ENST00000516445 113 ntBASIC0.12□□□□□ -2.39
KIAA1549Q9HCM3 RNU6-1220P-201ENST00000517126 108 ntBASIC0.12□□□□□ -2.39
KIAA1549Q9HCM3 ELOCP32-201ENST00000548625 324 ntBASIC0.12□□□□□ -2.39
KIAA1549Q9HCM3 AC026470.2-201ENST00000561492 181 ntBASIC0.12□□□□□ -2.39
KIAA1549Q9HCM3 MIR3941-201ENST00000582572 103 ntBASIC0.12□□□□□ -2.39
KIAA1549Q9HCM3 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC0.12□□□□□ -2.39
KIAA1549Q9HCM3 AP000240.1-201ENST00000609910 452 ntBASIC0.12□□□□□ -2.39
KIAA1549Q9HCM3 U2.17-201ENST00000611454 95 ntBASIC0.12□□□□□ -2.39
KIAA1549Q9HCM3 MIR4315-1-201ENST00000636800 73 ntBASIC0.12□□□□□ -2.39
KIAA1549Q9HCM3 AC099654.13-201ENST00000639774 207 ntBASIC0.12□□□□□ -2.39
KIAA1549Q9HCM3 MIR4315-2-201ENST00000640925 73 ntBASIC0.12□□□□□ -2.39
KIAA1549Q9HCM3 AP000568.1-201ENST00000282964 442 ntBASIC0.11□□□□□ -2.39
KIAA1549Q9HCM3 RNU6-833P-201ENST00000363486 107 ntBASIC0.11□□□□□ -2.39
KIAA1549Q9HCM3 RNU6-715P-201ENST00000365204 103 ntBASIC0.11□□□□□ -2.39
KIAA1549Q9HCM3 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.11□□□□□ -2.39
KIAA1549Q9HCM3 SNORA2B-201ENST00000384583 137 ntBASIC0.11□□□□□ -2.39
KIAA1549Q9HCM3 MIR140-201ENST00000385282 100 ntBASIC0.11□□□□□ -2.39
KIAA1549Q9HCM3 SNORD105-201ENST00000386910 85 ntBASIC0.11□□□□□ -2.39
KIAA1549Q9HCM3 MIR1295A-201ENST00000408463 79 ntBASIC0.11□□□□□ -2.39
KIAA1549Q9HCM3 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC0.11□□□□□ -2.39
KIAA1549Q9HCM3 RPS26P42-201ENST00000413485 326 ntBASIC0.11□□□□□ -2.39
KIAA1549Q9HCM3 AC084290.1-201ENST00000434995 374 ntBASIC0.11□□□□□ -2.39
KIAA1549Q9HCM3 AC004854.1-201ENST00000440356 349 ntBASIC0.11□□□□□ -2.39
KIAA1549Q9HCM3 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC0.11□□□□□ -2.39
KIAA1549Q9HCM3 AC091021.1-201ENST00000468051 388 ntBASIC0.11□□□□□ -2.39
KIAA1549Q9HCM3 SNORA68.3-201ENST00000515906 83 ntBASIC0.11□□□□□ -2.39
KIAA1549Q9HCM3 RNU6-863P-201ENST00000515989 104 ntBASIC0.11□□□□□ -2.39
KIAA1549Q9HCM3 SNORA31.10-201ENST00000516482 106 ntBASIC0.11□□□□□ -2.39
KIAA1549Q9HCM3 MTND1P35-201ENST00000526739 508 ntBASIC0.11□□□□□ -2.39
KIAA1549Q9HCM3 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC0.11□□□□□ -2.39
KIAA1549Q9HCM3 AL158050.2-201ENST00000605336 568 ntBASIC0.11□□□□□ -2.39
KIAA1549Q9HCM3 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC0.11□□□□□ -2.39
KIAA1549Q9HCM3 AC107308.1-201ENST00000615897 301 ntBASIC0.11□□□□□ -2.39
KIAA1549Q9HCM3 AC005562.2-201ENST00000618264 111 ntBASIC0.11□□□□□ -2.39
KIAA1549Q9HCM3 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC0.11□□□□□ -2.39
KIAA1549Q9HCM3 AL078596.1-201ENST00000624856 447 ntBASIC0.11□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms