Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC1.43□□□□□ -2.18
NXF3Q9H4D5 AC084364.2-201ENST00000546924 395 ntBASIC1.43□□□□□ -2.18
NXF3Q9H4D5 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC1.43□□□□□ -2.18
NXF3Q9H4D5 MIR3660-201ENST00000584845 100 ntBASIC1.43□□□□□ -2.18
NXF3Q9H4D5 SNRPGP20-201ENST00000604477 205 ntBASIC1.43□□□□□ -2.18
NXF3Q9H4D5 AC010900.2-201ENST00000604508 210 ntBASIC1.43□□□□□ -2.18
NXF3Q9H4D5 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.43□□□□□ -2.18
NXF3Q9H4D5 AL355073.2-201ENST00000612106 557 ntBASIC1.43□□□□□ -2.18
NXF3Q9H4D5 TEX41-243ENST00000614173 190 ntTSL 5 BASIC1.43□□□□□ -2.18
NXF3Q9H4D5 TCL6_2.1-201ENST00000615162 119 ntBASIC1.43□□□□□ -2.18
NXF3Q9H4D5 WT1-AS_8.1-201ENST00000615200 275 ntBASIC1.43□□□□□ -2.18
NXF3Q9H4D5 MIR8070-201ENST00000616510 88 ntBASIC1.43□□□□□ -2.18
NXF3Q9H4D5 TPTEP1-208ENST00000636884 213 ntBASIC1.43□□□□□ -2.18
NXF3Q9H4D5 MTND4P12-201ENST00000498999 1377 ntBASIC1.43□□□□□ -2.18
NXF3Q9H4D5 LINC02555-201ENST00000563933 1951 ntBASIC1.43□□□□□ -2.18
NXF3Q9H4D5 RNU6-53P-201ENST00000365367 106 ntBASIC1.42□□□□□ -2.18
NXF3Q9H4D5 RNU6-438P-201ENST00000365561 103 ntBASIC1.42□□□□□ -2.18
NXF3Q9H4D5 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC1.42□□□□□ -2.18
NXF3Q9H4D5 RNU6-17P-201ENST00000384245 107 ntBASIC1.42□□□□□ -2.18
NXF3Q9H4D5 RNU6-18P-201ENST00000384527 107 ntBASIC1.42□□□□□ -2.18
NXF3Q9H4D5 RNU6-601P-201ENST00000384540 107 ntBASIC1.42□□□□□ -2.18
NXF3Q9H4D5 MIR32-201ENST00000384965 70 ntBASIC1.42□□□□□ -2.18
NXF3Q9H4D5 SNORA12.2-201ENST00000391040 156 ntBASIC1.42□□□□□ -2.18
NXF3Q9H4D5 MIR320B2-201ENST00000408479 138 ntBASIC1.42□□□□□ -2.18
NXF3Q9H4D5 Y_RNA.594-201ENST00000410373 140 ntBASIC1.42□□□□□ -2.18
NXF3Q9H4D5 RNU6-1050P-201ENST00000410388 107 ntBASIC1.42□□□□□ -2.18
NXF3Q9H4D5 RNA5SP247-201ENST00000411181 105 ntBASIC1.42□□□□□ -2.18
NXF3Q9H4D5 AC004386.2-201ENST00000441858 148 ntBASIC1.42□□□□□ -2.18
NXF3Q9H4D5 AC009237.7-201ENST00000447357 229 ntBASIC1.42□□□□□ -2.18
NXF3Q9H4D5 RNU1-131P-201ENST00000458943 161 ntBASIC1.42□□□□□ -2.18
NXF3Q9H4D5 MTND4P17-201ENST00000470444 350 ntBASIC1.42□□□□□ -2.18
NXF3Q9H4D5 RPL30P10-201ENST00000488148 337 ntBASIC1.42□□□□□ -2.18
NXF3Q9H4D5 Y_RNA.670-201ENST00000516255 105 ntBASIC1.42□□□□□ -2.18
NXF3Q9H4D5 Y_RNA.708-201ENST00000516950 96 ntBASIC1.42□□□□□ -2.18
NXF3Q9H4D5 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC1.42□□□□□ -2.18
NXF3Q9H4D5 AL590705.4-201ENST00000532209 134 ntBASIC1.42□□□□□ -2.18
NXF3Q9H4D5 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC1.42□□□□□ -2.18
NXF3Q9H4D5 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.42□□□□□ -2.18
NXF3Q9H4D5 AC005786.1-201ENST00000588553 154 ntBASIC1.42□□□□□ -2.18
NXF3Q9H4D5 7SK.7-201ENST00000603504 247 ntBASIC1.42□□□□□ -2.18
NXF3Q9H4D5 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.42□□□□□ -2.18
NXF3Q9H4D5 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC1.42□□□□□ -2.18
NXF3Q9H4D5 AL359697.1-201ENST00000624879 587 ntBASIC1.42□□□□□ -2.18
NXF3Q9H4D5 AC099654.5-201ENST00000636479 350 ntBASIC1.42□□□□□ -2.18
NXF3Q9H4D5 MTND5P10-201ENST00000603719 1809 ntBASIC1.42□□□□□ -2.18
NXF3Q9H4D5 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
NXF3Q9H4D5 MIR340-201ENST00000362125 95 ntBASIC1.41□□□□□ -2.18
NXF3Q9H4D5 RNU6-338P-201ENST00000383888 105 ntBASIC1.41□□□□□ -2.18
NXF3Q9H4D5 RNU6-1026P-201ENST00000384465 108 ntBASIC1.41□□□□□ -2.18
NXF3Q9H4D5 SNORA40.6-201ENST00000391153 128 ntBASIC1.41□□□□□ -2.18
NXF3Q9H4D5 MIR300-201ENST00000401138 83 ntBASIC1.41□□□□□ -2.18
NXF3Q9H4D5 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC1.41□□□□□ -2.18
NXF3Q9H4D5 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.41□□□□□ -2.18
NXF3Q9H4D5 AL445305.1-201ENST00000432577 575 ntBASIC1.41□□□□□ -2.18
NXF3Q9H4D5 MTCO3P8-201ENST00000453691 755 ntBASIC1.41□□□□□ -2.18
NXF3Q9H4D5 RNU7-175P-201ENST00000515915 61 ntBASIC1.41□□□□□ -2.18
NXF3Q9H4D5 RNU6-58P-201ENST00000517143 103 ntBASIC1.41□□□□□ -2.18
NXF3Q9H4D5 CBX3P8-201ENST00000532412 525 ntBASIC1.41□□□□□ -2.18
NXF3Q9H4D5 AC027288.2-201ENST00000553028 243 ntBASIC1.41□□□□□ -2.18
NXF3Q9H4D5 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC1.41□□□□□ -2.18
NXF3Q9H4D5 ZNF204P-201ENST00000416749 2397 ntBASIC1.4□□□□□ -2.19
NXF3Q9H4D5 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC1.4□□□□□ -2.19
NXF3Q9H4D5 Y_RNA.2-201ENST00000362330 96 ntBASIC1.4□□□□□ -2.19
NXF3Q9H4D5 Y_RNA.48-201ENST00000362710 103 ntBASIC1.4□□□□□ -2.19
NXF3Q9H4D5 SNORA72.1-201ENST00000363485 129 ntBASIC1.4□□□□□ -2.19
NXF3Q9H4D5 RNA5SP493-201ENST00000364115 91 ntBASIC1.4□□□□□ -2.19
NXF3Q9H4D5 SNORD114-6-201ENST00000364393 72 ntBASIC1.4□□□□□ -2.19
NXF3Q9H4D5 Y_RNA.319-201ENST00000365138 92 ntBASIC1.4□□□□□ -2.19
NXF3Q9H4D5 RNU6-245P-201ENST00000384020 107 ntBASIC1.4□□□□□ -2.19
NXF3Q9H4D5 RNU6-1304P-201ENST00000411374 106 ntBASIC1.4□□□□□ -2.19
NXF3Q9H4D5 AC004866.1-201ENST00000411748 78 ntBASIC1.4□□□□□ -2.19
NXF3Q9H4D5 MTCO1P44-201ENST00000441935 243 ntBASIC1.4□□□□□ -2.19
NXF3Q9H4D5 SNRPEP8-201ENST00000442866 260 ntBASIC1.4□□□□□ -2.19
NXF3Q9H4D5 AC007395.1-201ENST00000451333 677 ntBASIC1.4□□□□□ -2.19
NXF3Q9H4D5 Y_RNA.635-201ENST00000459041 101 ntBASIC1.4□□□□□ -2.19
NXF3Q9H4D5 RPL36AP21-201ENST00000490372 323 ntBASIC1.4□□□□□ -2.19
NXF3Q9H4D5 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC1.4□□□□□ -2.19
NXF3Q9H4D5 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.4□□□□□ -2.19
NXF3Q9H4D5 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.4□□□□□ -2.19
NXF3Q9H4D5 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC1.4□□□□□ -2.19
NXF3Q9H4D5 MIR3169-201ENST00000578032 83 ntBASIC1.4□□□□□ -2.19
NXF3Q9H4D5 MIR5701-3-201ENST00000578890 82 ntBASIC1.4□□□□□ -2.19
NXF3Q9H4D5 MIR5006-201ENST00000583027 110 ntBASIC1.4□□□□□ -2.19
NXF3Q9H4D5 MIR5701-1-201ENST00000585138 82 ntBASIC1.4□□□□□ -2.19
NXF3Q9H4D5 UBE2V2P2-201ENST00000587677 504 ntBASIC1.4□□□□□ -2.19
NXF3Q9H4D5 AC009229.3-201ENST00000608056 282 ntBASIC1.4□□□□□ -2.19
NXF3Q9H4D5 MIR5701-2-201ENST00000615634 82 ntBASIC1.4□□□□□ -2.19
NXF3Q9H4D5 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.4□□□□□ -2.19
NXF3Q9H4D5 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
NXF3Q9H4D5 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.4□□□□□ -2.19
NXF3Q9H4D5 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.4□□□□□ -2.19
NXF3Q9H4D5 RNU6-545P-201ENST00000362681 104 ntBASIC1.39□□□□□ -2.19
NXF3Q9H4D5 Y_RNA.303-201ENST00000364998 94 ntBASIC1.39□□□□□ -2.19
NXF3Q9H4D5 Y_RNA.404-201ENST00000383978 102 ntBASIC1.39□□□□□ -2.19
NXF3Q9H4D5 Y_RNA.405-201ENST00000383979 100 ntBASIC1.39□□□□□ -2.19
NXF3Q9H4D5 Y_RNA.451-201ENST00000384200 100 ntBASIC1.39□□□□□ -2.19
NXF3Q9H4D5 Y_RNA.524-201ENST00000384564 100 ntBASIC1.39□□□□□ -2.19
NXF3Q9H4D5 Y_RNA.561-201ENST00000384694 100 ntBASIC1.39□□□□□ -2.19
NXF3Q9H4D5 RNU4-14P-201ENST00000410858 122 ntBASIC1.39□□□□□ -2.19
NXF3Q9H4D5 USMG5P1-201ENST00000425964 177 ntBASIC1.39□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 113.9 ms