Protein–RNA interactions for Protein: Q9H1E3

NUCKS1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, humanhuman

Known RBP Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1Q9H1E3 AC058791.1-201ENST00000608412 3198 ntBASIC3.95□□□□□ -1.78
NUCKS1Q9H1E3 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
NUCKS1Q9H1E3 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
NUCKS1Q9H1E3 RNU6-766P-201ENST00000362478 107 ntBASIC3.95□□□□□ -1.78
NUCKS1Q9H1E3 SNORA27.1-201ENST00000362604 124 ntBASIC3.95□□□□□ -1.78
NUCKS1Q9H1E3 RNA5SP124-201ENST00000362739 110 ntBASIC3.95□□□□□ -1.78
NUCKS1Q9H1E3 Y_RNA.91-201ENST00000363042 107 ntBASIC3.95□□□□□ -1.78
NUCKS1Q9H1E3 U8.11-201ENST00000384699 133 ntBASIC3.95□□□□□ -1.78
NUCKS1Q9H1E3 VDAC1P3-201ENST00000434069 851 ntBASIC3.95□□□□□ -1.78
NUCKS1Q9H1E3 U8.18-201ENST00000459285 133 ntBASIC3.95□□□□□ -1.78
NUCKS1Q9H1E3 RPS26P55-201ENST00000471178 356 ntBASIC3.95□□□□□ -1.78
NUCKS1Q9H1E3 RNU2-27P-201ENST00000516185 142 ntBASIC3.95□□□□□ -1.78
NUCKS1Q9H1E3 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.95□□□□□ -1.78
NUCKS1Q9H1E3 MIR1254-2-201ENST00000579553 63 ntBASIC3.95□□□□□ -1.78
NUCKS1Q9H1E3 AP001318.4-201ENST00000616637 121 ntBASIC3.95□□□□□ -1.78
NUCKS1Q9H1E3 AC073308.1-201ENST00000623696 305 ntBASIC3.95□□□□□ -1.78
NUCKS1Q9H1E3 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
NUCKS1Q9H1E3 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
NUCKS1Q9H1E3 AL356292.1-201ENST00000283110 373 ntBASIC3.94□□□□□ -1.78
NUCKS1Q9H1E3 Y_RNA.52-201ENST00000362760 96 ntBASIC3.94□□□□□ -1.78
NUCKS1Q9H1E3 Y_RNA.328-201ENST00000365208 113 ntBASIC3.94□□□□□ -1.78
NUCKS1Q9H1E3 RNU6-49P-201ENST00000384256 107 ntBASIC3.94□□□□□ -1.78
NUCKS1Q9H1E3 Y_RNA.558-201ENST00000384685 113 ntBASIC3.94□□□□□ -1.78
NUCKS1Q9H1E3 MIR607-201ENST00000385241 96 ntBASIC3.94□□□□□ -1.78
NUCKS1Q9H1E3 AL139095.1-201ENST00000404326 391 ntBASIC3.94□□□□□ -1.78
NUCKS1Q9H1E3 RNU2-70P-201ENST00000410718 179 ntBASIC3.94□□□□□ -1.78
NUCKS1Q9H1E3 AL139247.1-201ENST00000422768 325 ntBASIC3.94□□□□□ -1.78
NUCKS1Q9H1E3 HMGN2P32-201ENST00000444648 269 ntBASIC3.94□□□□□ -1.78
NUCKS1Q9H1E3 AC084357.1-201ENST00000473404 255 ntBASIC3.94□□□□□ -1.78
NUCKS1Q9H1E3 PRELID2P1-201ENST00000552837 301 ntBASIC3.94□□□□□ -1.78
NUCKS1Q9H1E3 MIR5187-201ENST00000583479 76 ntBASIC3.94□□□□□ -1.78
NUCKS1Q9H1E3 AC097639.2-201ENST00000603159 172 ntBASIC3.94□□□□□ -1.78
NUCKS1Q9H1E3 AL121772.2-201ENST00000614331 297 ntBASIC3.94□□□□□ -1.78
NUCKS1Q9H1E3 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
NUCKS1Q9H1E3 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
NUCKS1Q9H1E3 AL596211.1-201ENST00000569873 2277 ntBASIC3.93□□□□□ -1.78
NUCKS1Q9H1E3 AC000403.1-201ENST00000613696 3585 ntBASIC3.93□□□□□ -1.78
NUCKS1Q9H1E3 RNU6-50P-201ENST00000362356 103 ntBASIC3.93□□□□□ -1.78
NUCKS1Q9H1E3 Y_RNA.634-201ENST00000364811 113 ntBASIC3.93□□□□□ -1.78
NUCKS1Q9H1E3 RNU6-756P-201ENST00000383997 107 ntBASIC3.93□□□□□ -1.78
NUCKS1Q9H1E3 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
NUCKS1Q9H1E3 SNORA12-201ENST00000391162 147 ntBASIC3.93□□□□□ -1.78
NUCKS1Q9H1E3 AC023141.4-201ENST00000412031 328 ntBASIC3.93□□□□□ -1.78
NUCKS1Q9H1E3 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC3.93□□□□□ -1.78
NUCKS1Q9H1E3 SNORA84-201ENST00000459229 133 ntBASIC3.93□□□□□ -1.78
NUCKS1Q9H1E3 HMGN2P9-201ENST00000476875 229 ntBASIC3.93□□□□□ -1.78
NUCKS1Q9H1E3 RNA5SP468-201ENST00000516782 93 ntBASIC3.93□□□□□ -1.78
NUCKS1Q9H1E3 ANKRD20A9P-201ENST00000457997 2978 ntBASIC3.93□□□□□ -1.78
NUCKS1Q9H1E3 AC069528.2-201ENST00000624849 1991 ntBASIC3.93□□□□□ -1.78
NUCKS1Q9H1E3 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.92□□□□□ -1.78
NUCKS1Q9H1E3 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.92□□□□□ -1.78
NUCKS1Q9H1E3 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.92□□□□□ -1.78
NUCKS1Q9H1E3 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
NUCKS1Q9H1E3 MAPK10-362ENST00000641864 4484 ntBASIC3.92□□□□□ -1.78
NUCKS1Q9H1E3 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
NUCKS1Q9H1E3 RNU6-1210P-201ENST00000363775 107 ntBASIC3.92□□□□□ -1.78
NUCKS1Q9H1E3 SNORA51.4-201ENST00000364993 124 ntBASIC3.92□□□□□ -1.78
NUCKS1Q9H1E3 RNU6ATAC-201ENST00000408749 126 ntBASIC3.92□□□□□ -1.78
NUCKS1Q9H1E3 U3.44-201ENST00000458938 192 ntBASIC3.92□□□□□ -1.78
NUCKS1Q9H1E3 SNORD77.4-201ENST00000516158 81 ntBASIC3.92□□□□□ -1.78
NUCKS1Q9H1E3 SNORD19.2-201ENST00000516978 73 ntBASIC3.92□□□□□ -1.78
NUCKS1Q9H1E3 HIGD1AP1-201ENST00000550979 275 ntBASIC3.92□□□□□ -1.78
NUCKS1Q9H1E3 AC012493.2-201ENST00000595083 291 ntBASIC3.92□□□□□ -1.78
NUCKS1Q9H1E3 RNU1-30P-201ENST00000606575 163 ntBASIC3.92□□□□□ -1.78
NUCKS1Q9H1E3 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC3.92□□□□□ -1.78
NUCKS1Q9H1E3 Y_RNA.85-201ENST00000363014 111 ntBASIC3.91□□□□□ -1.78
NUCKS1Q9H1E3 RNU6-271P-201ENST00000363858 105 ntBASIC3.91□□□□□ -1.78
NUCKS1Q9H1E3 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
NUCKS1Q9H1E3 MIR891A-201ENST00000401237 79 ntBASIC3.91□□□□□ -1.78
NUCKS1Q9H1E3 MIR1263-201ENST00000408324 86 ntBASIC3.91□□□□□ -1.78
NUCKS1Q9H1E3 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.91□□□□□ -1.78
NUCKS1Q9H1E3 RNA5SP129-201ENST00000410276 118 ntBASIC3.91□□□□□ -1.78
NUCKS1Q9H1E3 RN7SKP27-201ENST00000410684 333 ntBASIC3.91□□□□□ -1.78
NUCKS1Q9H1E3 AL133162.1-201ENST00000463228 453 ntBASIC3.91□□□□□ -1.78
NUCKS1Q9H1E3 RNU6-63P-201ENST00000516690 95 ntBASIC3.91□□□□□ -1.78
NUCKS1Q9H1E3 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
NUCKS1Q9H1E3 AC009831.4-201ENST00000620744 325 ntBASIC3.91□□□□□ -1.78
NUCKS1Q9H1E3 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.91□□□□□ -1.78
NUCKS1Q9H1E3 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.91□□□□□ -1.78
NUCKS1Q9H1E3 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
NUCKS1Q9H1E3 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.9□□□□□ -1.78
NUCKS1Q9H1E3 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.9□□□□□ -1.78
NUCKS1Q9H1E3 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
NUCKS1Q9H1E3 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
NUCKS1Q9H1E3 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.78
NUCKS1Q9H1E3 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.9□□□□□ -1.79
NUCKS1Q9H1E3 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.79
NUCKS1Q9H1E3 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.79
NUCKS1Q9H1E3 snoU2_19.1-201ENST00000362361 80 ntBASIC3.9□□□□□ -1.79
NUCKS1Q9H1E3 RNU6-655P-201ENST00000362858 107 ntBASIC3.9□□□□□ -1.79
NUCKS1Q9H1E3 Y_RNA.163-201ENST00000363702 113 ntBASIC3.9□□□□□ -1.79
NUCKS1Q9H1E3 SNORA51.10-201ENST00000384418 136 ntBASIC3.9□□□□□ -1.79
NUCKS1Q9H1E3 SNORD12C-201ENST00000386307 89 ntBASIC3.9□□□□□ -1.79
NUCKS1Q9H1E3 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
NUCKS1Q9H1E3 AL021397.1-201ENST00000451806 248 ntBASIC3.9□□□□□ -1.79
NUCKS1Q9H1E3 SNORA18.4-201ENST00000516440 124 ntBASIC3.9□□□□□ -1.79
NUCKS1Q9H1E3 AP003327.1-201ENST00000529684 127 ntBASIC3.9□□□□□ -1.79
NUCKS1Q9H1E3 AC007012.1-201ENST00000567192 175 ntBASIC3.9□□□□□ -1.79
NUCKS1Q9H1E3 uc_338.4-201ENST00000616635 176 ntBASIC3.9□□□□□ -1.79
NUCKS1Q9H1E3 CR392039.5-201ENST00000623201 510 ntBASIC3.9□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 299.1 ms