Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 MIR7153-201ENST00000637758 57 ntBASIC1.09□□□□□ -2.23
LCE3DQ9BYE3 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC1.09□□□□□ -2.23
LCE3DQ9BYE3 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC1.09□□□□□ -2.23
LCE3DQ9BYE3 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC1.09□□□□□ -2.23
LCE3DQ9BYE3 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC1.09□□□□□ -2.24
LCE3DQ9BYE3 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC1.09□□□□□ -2.24
LCE3DQ9BYE3 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.24
LCE3DQ9BYE3 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC1.09□□□□□ -2.24
LCE3DQ9BYE3 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC1.08□□□□□ -2.24
LCE3DQ9BYE3 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
LCE3DQ9BYE3 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
LCE3DQ9BYE3 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC1.08□□□□□ -2.24
LCE3DQ9BYE3 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
LCE3DQ9BYE3 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC1.08□□□□□ -2.24
LCE3DQ9BYE3 SNORD35B-201ENST00000363660 87 ntBASIC1.08□□□□□ -2.24
LCE3DQ9BYE3 Y_RNA.346-201ENST00000365385 112 ntBASIC1.08□□□□□ -2.24
LCE3DQ9BYE3 RNU6-880P-201ENST00000384526 107 ntBASIC1.08□□□□□ -2.24
LCE3DQ9BYE3 MIR592-201ENST00000384959 97 ntBASIC1.08□□□□□ -2.24
LCE3DQ9BYE3 RNU6-220P-201ENST00000390919 107 ntBASIC1.08□□□□□ -2.24
LCE3DQ9BYE3 RNU1-101P-201ENST00000391171 127 ntBASIC1.08□□□□□ -2.24
LCE3DQ9BYE3 SNORA17A-201ENST00000391185 133 ntBASIC1.08□□□□□ -2.24
LCE3DQ9BYE3 MIR298-201ENST00000401212 88 ntBASIC1.08□□□□□ -2.24
LCE3DQ9BYE3 SNORA11F-201ENST00000408237 128 ntBASIC1.08□□□□□ -2.24
LCE3DQ9BYE3 MIR1289-1-201ENST00000408836 144 ntBASIC1.08□□□□□ -2.24
LCE3DQ9BYE3 RN7SKP156-201ENST00000410308 342 ntBASIC1.08□□□□□ -2.24
LCE3DQ9BYE3 RPL37P18-201ENST00000411602 243 ntBASIC1.08□□□□□ -2.24
LCE3DQ9BYE3 AL513477.1-202ENST00000417061 214 ntBASIC1.08□□□□□ -2.24
LCE3DQ9BYE3 MLLT10P1-201ENST00000418346 262 ntBASIC1.08□□□□□ -2.24
LCE3DQ9BYE3 AC063976.4-201ENST00000421971 163 ntBASIC1.08□□□□□ -2.24
LCE3DQ9BYE3 AC011998.1-201ENST00000433403 117 ntBASIC1.08□□□□□ -2.24
LCE3DQ9BYE3 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC1.08□□□□□ -2.24
LCE3DQ9BYE3 AF228730.3-201ENST00000436691 102 ntBASIC1.08□□□□□ -2.24
LCE3DQ9BYE3 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.08□□□□□ -2.24
LCE3DQ9BYE3 AC073850.1-201ENST00000449243 255 ntBASIC1.08□□□□□ -2.24
LCE3DQ9BYE3 U3.44-201ENST00000458938 192 ntBASIC1.08□□□□□ -2.24
LCE3DQ9BYE3 NDUFA4P2-201ENST00000489989 244 ntBASIC1.08□□□□□ -2.24
LCE3DQ9BYE3 AC018868.1-201ENST00000491307 315 ntBASIC1.08□□□□□ -2.24
LCE3DQ9BYE3 RPL29P14-201ENST00000495837 428 ntBASIC1.08□□□□□ -2.24
LCE3DQ9BYE3 CKS1BP2-201ENST00000497342 240 ntBASIC1.08□□□□□ -2.24
LCE3DQ9BYE3 MRPS17P9-201ENST00000511924 393 ntBASIC1.08□□□□□ -2.24
LCE3DQ9BYE3 RNA5SP473-201ENST00000516402 125 ntBASIC1.08□□□□□ -2.24
LCE3DQ9BYE3 SNORA18.4-201ENST00000516440 124 ntBASIC1.08□□□□□ -2.24
LCE3DQ9BYE3 Y_RNA.690-201ENST00000516603 95 ntBASIC1.08□□□□□ -2.24
LCE3DQ9BYE3 RNU6-965P-201ENST00000516721 96 ntBASIC1.08□□□□□ -2.24
LCE3DQ9BYE3 RN7SKP282-201ENST00000516824 299 ntBASIC1.08□□□□□ -2.24
LCE3DQ9BYE3 IGLVIV-65-201ENST00000517313 360 ntBASIC1.08□□□□□ -2.24
LCE3DQ9BYE3 AP002004.2-201ENST00000531656 154 ntBASIC1.08□□□□□ -2.24
LCE3DQ9BYE3 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC1.08□□□□□ -2.24
LCE3DQ9BYE3 MIR4330-201ENST00000579077 105 ntBASIC1.08□□□□□ -2.24
LCE3DQ9BYE3 MIR4644-201ENST00000579929 84 ntBASIC1.08□□□□□ -2.24
LCE3DQ9BYE3 MIR3667-201ENST00000581025 74 ntBASIC1.08□□□□□ -2.24
LCE3DQ9BYE3 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC1.08□□□□□ -2.24
LCE3DQ9BYE3 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC1.08□□□□□ -2.24
LCE3DQ9BYE3 AL031274.2-201ENST00000599419 203 ntBASIC1.08□□□□□ -2.24
LCE3DQ9BYE3 AC073413.2-201ENST00000604332 360 ntBASIC1.08□□□□□ -2.24
LCE3DQ9BYE3 AL670379.3-201ENST00000605040 251 ntBASIC1.08□□□□□ -2.24
LCE3DQ9BYE3 uc_338.13-201ENST00000618243 179 ntBASIC1.08□□□□□ -2.24
LCE3DQ9BYE3 SNORA17.5-201ENST00000630429 132 ntBASIC1.08□□□□□ -2.24
LCE3DQ9BYE3 MIR6079-201ENST00000635807 62 ntBASIC1.08□□□□□ -2.24
LCE3DQ9BYE3 MIR338-201ENST00000636369 67 ntBASIC1.08□□□□□ -2.24
LCE3DQ9BYE3 U6.98-201ENST00000637157 84 ntBASIC1.08□□□□□ -2.24
LCE3DQ9BYE3 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC1.08□□□□□ -2.24
LCE3DQ9BYE3 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
LCE3DQ9BYE3 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC1.08□□□□□ -2.24
LCE3DQ9BYE3 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC1.08□□□□□ -2.24
LCE3DQ9BYE3 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC1.08□□□□□ -2.24
LCE3DQ9BYE3 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC1.08□□□□□ -2.24
LCE3DQ9BYE3 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
LCE3DQ9BYE3 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC1.08□□□□□ -2.24
LCE3DQ9BYE3 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
LCE3DQ9BYE3 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC1.08□□□□□ -2.24
LCE3DQ9BYE3 SDAD1P1-202ENST00000524156 2051 ntBASIC1.08□□□□□ -2.24
LCE3DQ9BYE3 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC1.08□□□□□ -2.24
LCE3DQ9BYE3 AL442644.1-201ENST00000454390 3105 ntBASIC1.07□□□□□ -2.24
LCE3DQ9BYE3 AC093908.1-201ENST00000623125 8092 ntBASIC1.07□□□□□ -2.24
LCE3DQ9BYE3 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
LCE3DQ9BYE3 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
LCE3DQ9BYE3 ZNF271P-202ENST00000465539 1970 ntBASIC1.07□□□□□ -2.24
LCE3DQ9BYE3 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC1.07□□□□□ -2.24
LCE3DQ9BYE3 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC1.07□□□□□ -2.24
LCE3DQ9BYE3 RNA5SP305-201ENST00000362665 119 ntBASIC1.07□□□□□ -2.24
LCE3DQ9BYE3 RNU6-461P-201ENST00000364195 107 ntBASIC1.07□□□□□ -2.24
LCE3DQ9BYE3 Y_RNA.309-201ENST00000365046 111 ntBASIC1.07□□□□□ -2.24
LCE3DQ9BYE3 SNORA25B-201ENST00000365507 128 ntBASIC1.07□□□□□ -2.24
LCE3DQ9BYE3 Y_RNA.486-201ENST00000384398 107 ntBASIC1.07□□□□□ -2.24
LCE3DQ9BYE3 RNU6-160P-201ENST00000384591 107 ntBASIC1.07□□□□□ -2.24
LCE3DQ9BYE3 MIR218-1-201ENST00000384999 110 ntBASIC1.07□□□□□ -2.24
LCE3DQ9BYE3 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC1.07□□□□□ -2.24
LCE3DQ9BYE3 RNA5SP397-201ENST00000391323 118 ntBASIC1.07□□□□□ -2.24
LCE3DQ9BYE3 AL117342.1-201ENST00000404861 406 ntBASIC1.07□□□□□ -2.24
LCE3DQ9BYE3 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.07□□□□□ -2.24
LCE3DQ9BYE3 TRIAP1P1-201ENST00000427062 225 ntBASIC1.07□□□□□ -2.24
LCE3DQ9BYE3 FTH1P12-201ENST00000432137 551 ntBASIC1.07□□□□□ -2.24
LCE3DQ9BYE3 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC1.07□□□□□ -2.24
LCE3DQ9BYE3 AC099677.2-201ENST00000436385 175 ntBASIC1.07□□□□□ -2.24
LCE3DQ9BYE3 ATP5J2P3-201ENST00000451550 258 ntBASIC1.07□□□□□ -2.24
LCE3DQ9BYE3 RN7SL459P-201ENST00000481078 302 ntBASIC1.07□□□□□ -2.24
LCE3DQ9BYE3 RN7SKP19-201ENST00000516016 252 ntBASIC1.07□□□□□ -2.24
LCE3DQ9BYE3 RNA5SP362-201ENST00000516048 118 ntBASIC1.07□□□□□ -2.24
LCE3DQ9BYE3 RNU6-991P-201ENST00000516168 107 ntBASIC1.07□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms