Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 Y_RNA.700-201ENST00000516806 100 ntBASIC-0.68□□□□□ -2.52
SCAPERQ9BY12 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC-0.68□□□□□ -2.52
SCAPERQ9BY12 AC069545.1-201ENST00000605671 358 ntBASIC-0.68□□□□□ -2.52
SCAPERQ9BY12 AC007684.1-201ENST00000609671 477 ntBASIC-0.68□□□□□ -2.52
SCAPERQ9BY12 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC-0.68□□□□□ -2.52
SCAPERQ9BY12 RNU6-369P-201ENST00000362515 102 ntBASIC-0.69□□□□□ -2.52
SCAPERQ9BY12 Y_RNA.48-201ENST00000362710 103 ntBASIC-0.69□□□□□ -2.52
SCAPERQ9BY12 SNORD115-41-201ENST00000363608 82 ntBASIC-0.69□□□□□ -2.52
SCAPERQ9BY12 RNU5E-6P-201ENST00000365574 115 ntBASIC-0.69□□□□□ -2.52
SCAPERQ9BY12 RNU6-293P-201ENST00000411259 106 ntBASIC-0.69□□□□□ -2.52
SCAPERQ9BY12 AL953862.1-201ENST00000423016 168 ntBASIC-0.69□□□□□ -2.52
SCAPERQ9BY12 RNU7-159P-201ENST00000459284 62 ntBASIC-0.69□□□□□ -2.52
SCAPERQ9BY12 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC-0.69□□□□□ -2.52
SCAPERQ9BY12 RNY4P37-201ENST00000516225 96 ntBASIC-0.69□□□□□ -2.52
SCAPERQ9BY12 RNU6-567P-201ENST00000516746 107 ntBASIC-0.69□□□□□ -2.52
SCAPERQ9BY12 MIR5697-201ENST00000578045 78 ntBASIC-0.69□□□□□ -2.52
SCAPERQ9BY12 DEFB131E-202ENST00000602581 683 ntBASIC-0.69□□□□□ -2.52
SCAPERQ9BY12 AL158042.1-201ENST00000605338 460 ntBASIC-0.69□□□□□ -2.52
SCAPERQ9BY12 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC-0.69□□□□□ -2.52
SCAPERQ9BY12 RNU6-777P-201ENST00000364265 104 ntBASIC-0.7□□□□□ -2.52
SCAPERQ9BY12 SNORA2B-201ENST00000384583 137 ntBASIC-0.7□□□□□ -2.52
SCAPERQ9BY12 MIR578-201ENST00000384828 96 ntBASIC-0.7□□□□□ -2.52
SCAPERQ9BY12 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC-0.7□□□□□ -2.52
SCAPERQ9BY12 MIR5708-201ENST00000579723 85 ntBASIC-0.7□□□□□ -2.52
SCAPERQ9BY12 AL117336.2-201ENST00000602435 335 ntBASIC-0.7□□□□□ -2.52
SCAPERQ9BY12 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC-0.7□□□□□ -2.52
SCAPERQ9BY12 MIR548H2-201ENST00000408874 88 ntBASIC-0.71□□□□□ -2.52
SCAPERQ9BY12 SNX3P1X-201ENST00000414887 175 ntBASIC-0.71□□□□□ -2.52
SCAPERQ9BY12 AC090960.1-201ENST00000421072 306 ntBASIC-0.71□□□□□ -2.52
SCAPERQ9BY12 AL133396.1-201ENST00000432048 687 ntBASIC-0.71□□□□□ -2.52
SCAPERQ9BY12 RNU6-977P-201ENST00000516411 103 ntBASIC-0.71□□□□□ -2.52
SCAPERQ9BY12 AL512347.1-201ENST00000566420 503 ntBASIC-0.71□□□□□ -2.52
SCAPERQ9BY12 Y_RNA.35-201ENST00000362601 101 ntBASIC-0.72□□□□□ -2.52
SCAPERQ9BY12 RNU6-552P-201ENST00000362869 119 ntBASIC-0.72□□□□□ -2.52
SCAPERQ9BY12 U3.4-201ENST00000363352 213 ntBASIC-0.72□□□□□ -2.52
SCAPERQ9BY12 SNORD115-24-201ENST00000363528 82 ntBASIC-0.72□□□□□ -2.52
SCAPERQ9BY12 Y_RNA.408-201ENST00000383987 102 ntBASIC-0.72□□□□□ -2.52
SCAPERQ9BY12 RNU6-692P-201ENST00000384496 107 ntBASIC-0.72□□□□□ -2.52
SCAPERQ9BY12 RNU6-269P-201ENST00000391077 97 ntBASIC-0.72□□□□□ -2.52
SCAPERQ9BY12 MIR1468-201ENST00000410600 86 ntBASIC-0.72□□□□□ -2.52
SCAPERQ9BY12 RNU6-1304P-201ENST00000411374 106 ntBASIC-0.72□□□□□ -2.52
SCAPERQ9BY12 ELOCP17-201ENST00000414751 326 ntBASIC-0.72□□□□□ -2.52
SCAPERQ9BY12 AC114878.1-201ENST00000441166 358 ntBASIC-0.72□□□□□ -2.52
SCAPERQ9BY12 AC079395.1-201ENST00000510981 262 ntBASIC-0.72□□□□□ -2.52
SCAPERQ9BY12 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC-0.72□□□□□ -2.52
SCAPERQ9BY12 AC013828.2-201ENST00000532487 235 ntBASIC-0.72□□□□□ -2.52
SCAPERQ9BY12 AC011921.3-201ENST00000605540 361 ntBASIC-0.72□□□□□ -2.52
SCAPERQ9BY12 AC023158.2-201ENST00000614876 543 ntBASIC-0.72□□□□□ -2.52
SCAPERQ9BY12 AL591926.4-201ENST00000616895 298 ntBASIC-0.72□□□□□ -2.52
SCAPERQ9BY12 RNU6-792P-201ENST00000363490 107 ntBASIC-0.72□□□□□ -2.53
SCAPERQ9BY12 RNU6-1097P-201ENST00000363586 107 ntBASIC-0.72□□□□□ -2.53
SCAPERQ9BY12 Y_RNA.453-201ENST00000384223 109 ntBASIC-0.72□□□□□ -2.53
SCAPERQ9BY12 MIR208B-201ENST00000401172 77 ntBASIC-0.72□□□□□ -2.53
SCAPERQ9BY12 MIR320C1-201ENST00000408566 88 ntBASIC-0.72□□□□□ -2.53
SCAPERQ9BY12 RNU6-1186P-201ENST00000410429 97 ntBASIC-0.72□□□□□ -2.53
SCAPERQ9BY12 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC-0.72□□□□□ -2.53
SCAPERQ9BY12 AC074290.1-201ENST00000448883 135 ntBASIC-0.72□□□□□ -2.53
SCAPERQ9BY12 RNU7-165P-201ENST00000458864 60 ntBASIC-0.72□□□□□ -2.53
SCAPERQ9BY12 RNU7-99P-201ENST00000516271 62 ntBASIC-0.72□□□□□ -2.53
SCAPERQ9BY12 RNU7-128P-201ENST00000517247 62 ntBASIC-0.72□□□□□ -2.53
SCAPERQ9BY12 MIR3912-201ENST00000577566 105 ntBASIC-0.72□□□□□ -2.53
SCAPERQ9BY12 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC-0.72□□□□□ -2.53
SCAPERQ9BY12 Y_RNA.757-201ENST00000578934 114 ntBASIC-0.72□□□□□ -2.53
SCAPERQ9BY12 AL355297.3-201ENST00000604082 446 ntBASIC-0.72□□□□□ -2.53
SCAPERQ9BY12 AC097478.2-201ENST00000610572 514 ntBASIC-0.72□□□□□ -2.53
SCAPERQ9BY12 AC008250.2-201ENST00000615261 205 ntBASIC-0.72□□□□□ -2.53
SCAPERQ9BY12 MIR6755-201ENST00000619993 66 ntBASIC-0.72□□□□□ -2.53
SCAPERQ9BY12 AL136221.1-201ENST00000621449 509 ntBASIC-0.72□□□□□ -2.53
SCAPERQ9BY12 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC-0.73□□□□□ -2.53
SCAPERQ9BY12 SNORD32A-201ENST00000364805 84 ntBASIC-0.73□□□□□ -2.53
SCAPERQ9BY12 RNU6-1240P-201ENST00000365155 104 ntBASIC-0.73□□□□□ -2.53
SCAPERQ9BY12 Y_RNA.336-201ENST00000365307 109 ntBASIC-0.73□□□□□ -2.53
SCAPERQ9BY12 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.73□□□□□ -2.53
SCAPERQ9BY12 MIR526A1-201ENST00000384897 85 ntBASIC-0.73□□□□□ -2.53
SCAPERQ9BY12 RNU2-3P-201ENST00000410144 191 ntBASIC-0.73□□□□□ -2.53
SCAPERQ9BY12 RNU4-46P-201ENST00000410818 138 ntBASIC-0.73□□□□□ -2.53
SCAPERQ9BY12 RNU2-62P-201ENST00000410868 191 ntBASIC-0.73□□□□□ -2.53
SCAPERQ9BY12 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC-0.73□□□□□ -2.53
SCAPERQ9BY12 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.73□□□□□ -2.53
SCAPERQ9BY12 MIR4723-201ENST00000585070 81 ntBASIC-0.73□□□□□ -2.53
SCAPERQ9BY12 AL670379.3-201ENST00000605040 251 ntBASIC-0.73□□□□□ -2.53
SCAPERQ9BY12 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC-0.73□□□□□ -2.53
SCAPERQ9BY12 Y_RNA.18-201ENST00000362461 102 ntBASIC-0.74□□□□□ -2.53
SCAPERQ9BY12 Y_RNA.265-201ENST00000364677 108 ntBASIC-0.74□□□□□ -2.53
SCAPERQ9BY12 MIR454-201ENST00000390180 115 ntBASIC-0.74□□□□□ -2.53
SCAPERQ9BY12 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC-0.74□□□□□ -2.53
SCAPERQ9BY12 MTCO1P27-201ENST00000448269 226 ntBASIC-0.74□□□□□ -2.53
SCAPERQ9BY12 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC-0.74□□□□□ -2.53
SCAPERQ9BY12 AC026782.1-201ENST00000512952 449 ntBASIC-0.74□□□□□ -2.53
SCAPERQ9BY12 RNU6-848P-201ENST00000515948 107 ntBASIC-0.74□□□□□ -2.53
SCAPERQ9BY12 RNU6-377P-201ENST00000515965 102 ntBASIC-0.74□□□□□ -2.53
SCAPERQ9BY12 RNU6-617P-201ENST00000516147 107 ntBASIC-0.74□□□□□ -2.53
SCAPERQ9BY12 RNU6-473P-201ENST00000516164 107 ntBASIC-0.74□□□□□ -2.53
SCAPERQ9BY12 RNU6-1049P-201ENST00000516414 107 ntBASIC-0.74□□□□□ -2.53
SCAPERQ9BY12 RNU7-28P-201ENST00000516759 62 ntBASIC-0.74□□□□□ -2.53
SCAPERQ9BY12 DEFB130C-202ENST00000530001 230 ntBASIC-0.74□□□□□ -2.53
SCAPERQ9BY12 VN1R87P-201ENST00000596706 487 ntBASIC-0.74□□□□□ -2.53
SCAPERQ9BY12 AL121992.2-201ENST00000606262 256 ntBASIC-0.74□□□□□ -2.53
SCAPERQ9BY12 MPP6-209ENST00000625307 126 ntTSL 5 BASIC-0.74□□□□□ -2.53
SCAPERQ9BY12 RNU6-883P-201ENST00000384597 107 ntBASIC-0.75□□□□□ -2.53
Retrieved 100 of 98,524 protein–RNA pairs in 108.6 ms