Protein–RNA interactions for Protein: Q9BWG4

SSBP4, Single-stranded DNA-binding protein 4, humanhuman

Predicted RBP Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4Q9BWG4 AC083863.1-201ENST00000438811 231 ntBASIC3.2□□□□□ -1.9
SSBP4Q9BWG4 AL353689.1-201ENST00000438895 199 ntBASIC3.2□□□□□ -1.9
SSBP4Q9BWG4 RPL23AP93-201ENST00000440847 484 ntBASIC3.2□□□□□ -1.9
SSBP4Q9BWG4 AC010099.1-201ENST00000455434 375 ntBASIC3.2□□□□□ -1.9
SSBP4Q9BWG4 RNA5SP57-201ENST00000459463 123 ntBASIC3.2□□□□□ -1.9
SSBP4Q9BWG4 RNU6-162P-201ENST00000516228 103 ntBASIC3.2□□□□□ -1.9
SSBP4Q9BWG4 RNU2-58P-201ENST00000516403 183 ntBASIC3.2□□□□□ -1.9
SSBP4Q9BWG4 RNU7-6P-201ENST00000516845 62 ntBASIC3.2□□□□□ -1.9
SSBP4Q9BWG4 RNA5SP143-201ENST00000516936 115 ntBASIC3.2□□□□□ -1.9
SSBP4Q9BWG4 AC022523.2-201ENST00000561045 150 ntBASIC3.2□□□□□ -1.9
SSBP4Q9BWG4 AC087685.1-201ENST00000587507 141 ntBASIC3.2□□□□□ -1.9
SSBP4Q9BWG4 MIR486-1-201ENST00000612171 68 ntBASIC3.2□□□□□ -1.9
SSBP4Q9BWG4 AL359075.3-201ENST00000613288 217 ntBASIC3.2□□□□□ -1.9
SSBP4Q9BWG4 MIR6826-201ENST00000617808 98 ntBASIC3.2□□□□□ -1.9
SSBP4Q9BWG4 AF117829.1-206ENST00000621883 3802 ntBASIC3.2□□□□□ -1.9
SSBP4Q9BWG4 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
SSBP4Q9BWG4 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
SSBP4Q9BWG4 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.2□□□□□ -1.9
SSBP4Q9BWG4 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
SSBP4Q9BWG4 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
SSBP4Q9BWG4 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
SSBP4Q9BWG4 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.2□□□□□ -1.9
SSBP4Q9BWG4 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
SSBP4Q9BWG4 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
SSBP4Q9BWG4 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.19□□□□□ -1.9
SSBP4Q9BWG4 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.19□□□□□ -1.9
SSBP4Q9BWG4 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
SSBP4Q9BWG4 RNA5SP191-201ENST00000362585 102 ntBASIC3.19□□□□□ -1.9
SSBP4Q9BWG4 Y_RNA.531-201ENST00000384589 121 ntBASIC3.19□□□□□ -1.9
SSBP4Q9BWG4 RNU6-644P-201ENST00000391155 98 ntBASIC3.19□□□□□ -1.9
SSBP4Q9BWG4 RNU11-5P-201ENST00000391216 129 ntBASIC3.19□□□□□ -1.9
SSBP4Q9BWG4 RNU2-37P-201ENST00000410695 177 ntBASIC3.19□□□□□ -1.9
SSBP4Q9BWG4 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.19□□□□□ -1.9
SSBP4Q9BWG4 RNU1-131P-201ENST00000458943 161 ntBASIC3.19□□□□□ -1.9
SSBP4Q9BWG4 RN7SL812P-201ENST00000493791 279 ntBASIC3.19□□□□□ -1.9
SSBP4Q9BWG4 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC3.19□□□□□ -1.9
SSBP4Q9BWG4 RNU6-857P-201ENST00000515893 110 ntBASIC3.19□□□□□ -1.9
SSBP4Q9BWG4 RNA5SP34-201ENST00000516887 130 ntBASIC3.19□□□□□ -1.9
SSBP4Q9BWG4 IGLVIV-65-201ENST00000517313 360 ntBASIC3.19□□□□□ -1.9
SSBP4Q9BWG4 MIR4305-201ENST00000583252 102 ntBASIC3.19□□□□□ -1.9
SSBP4Q9BWG4 AC073413.2-201ENST00000604332 360 ntBASIC3.19□□□□□ -1.9
SSBP4Q9BWG4 AC002076.2-201ENST00000617362 122 ntBASIC3.19□□□□□ -1.9
SSBP4Q9BWG4 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC3.19□□□□□ -1.9
SSBP4Q9BWG4 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
SSBP4Q9BWG4 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
SSBP4Q9BWG4 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
SSBP4Q9BWG4 MFSD8-242ENST00000641690 4199 ntBASIC3.19□□□□□ -1.9
SSBP4Q9BWG4 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
SSBP4Q9BWG4 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
SSBP4Q9BWG4 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.19□□□□□ -1.9
SSBP4Q9BWG4 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
SSBP4Q9BWG4 AL049781.1-201ENST00000623195 3585 ntBASIC3.18□□□□□ -1.9
SSBP4Q9BWG4 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
SSBP4Q9BWG4 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.18□□□□□ -1.9
SSBP4Q9BWG4 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
SSBP4Q9BWG4 SNORA33-201ENST00000363664 130 ntBASIC3.18□□□□□ -1.9
SSBP4Q9BWG4 RNU6ATAC5P-201ENST00000388104 126 ntBASIC3.18□□□□□ -1.9
SSBP4Q9BWG4 RN7SKP202-201ENST00000410439 330 ntBASIC3.18□□□□□ -1.9
SSBP4Q9BWG4 AC009238.1-201ENST00000442165 424 ntBASIC3.18□□□□□ -1.9
SSBP4Q9BWG4 AC009237.6-201ENST00000446969 424 ntBASIC3.18□□□□□ -1.9
SSBP4Q9BWG4 SCGB1D5P-201ENST00000515134 247 ntBASIC3.18□□□□□ -1.9
SSBP4Q9BWG4 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC3.18□□□□□ -1.9
SSBP4Q9BWG4 AC103810.1-201ENST00000579873 453 ntBASIC3.18□□□□□ -1.9
SSBP4Q9BWG4 MIR3667-201ENST00000581025 74 ntBASIC3.18□□□□□ -1.9
SSBP4Q9BWG4 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.18□□□□□ -1.9
SSBP4Q9BWG4 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.18□□□□□ -1.9
SSBP4Q9BWG4 MIR7702-201ENST00000621931 59 ntBASIC3.18□□□□□ -1.9
SSBP4Q9BWG4 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
SSBP4Q9BWG4 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
SSBP4Q9BWG4 ZNF271P-202ENST00000465539 1970 ntBASIC3.18□□□□□ -1.9
SSBP4Q9BWG4 AC010733.2-201ENST00000589496 5702 ntBASIC3.17□□□□□ -1.9
SSBP4Q9BWG4 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
SSBP4Q9BWG4 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
SSBP4Q9BWG4 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
SSBP4Q9BWG4 SDAD1P1-202ENST00000524156 2051 ntBASIC3.17□□□□□ -1.9
SSBP4Q9BWG4 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
SSBP4Q9BWG4 RNU6-787P-201ENST00000384032 107 ntBASIC3.17□□□□□ -1.9
SSBP4Q9BWG4 RNU6-675P-201ENST00000384236 104 ntBASIC3.17□□□□□ -1.9
SSBP4Q9BWG4 SNORD116-22-201ENST00000384430 92 ntBASIC3.17□□□□□ -1.9
SSBP4Q9BWG4 RNU6-1274P-201ENST00000384557 107 ntBASIC3.17□□□□□ -1.9
SSBP4Q9BWG4 RNA5SP332-201ENST00000391063 115 ntBASIC3.17□□□□□ -1.9
SSBP4Q9BWG4 AL451046.2-201ENST00000403074 277 ntBASIC3.17□□□□□ -1.9
SSBP4Q9BWG4 MIR1178-201ENST00000408396 91 ntBASIC3.17□□□□□ -1.9
SSBP4Q9BWG4 RNU6-938P-201ENST00000411285 103 ntBASIC3.17□□□□□ -1.9
SSBP4Q9BWG4 AC096949.1-201ENST00000412047 152 ntBASIC3.17□□□□□ -1.9
SSBP4Q9BWG4 COX6B1P1-201ENST00000415962 213 ntBASIC3.17□□□□□ -1.9
SSBP4Q9BWG4 AC004941.2-201ENST00000427009 228 ntBASIC3.17□□□□□ -1.9
SSBP4Q9BWG4 RPS15AP28-201ENST00000435088 386 ntBASIC3.17□□□□□ -1.9
SSBP4Q9BWG4 RPL12P3-201ENST00000440080 396 ntBASIC3.17□□□□□ -1.9
SSBP4Q9BWG4 snoU13.20-201ENST00000459180 104 ntBASIC3.17□□□□□ -1.9
SSBP4Q9BWG4 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC3.17□□□□□ -1.9
SSBP4Q9BWG4 AC008953.1-201ENST00000497334 318 ntBASIC3.17□□□□□ -1.9
SSBP4Q9BWG4 RNU6-795P-201ENST00000516323 103 ntBASIC3.17□□□□□ -1.9
SSBP4Q9BWG4 AC019288.1-201ENST00000557918 224 ntBASIC3.17□□□□□ -1.9
SSBP4Q9BWG4 AC079587.1-201ENST00000603846 277 ntBASIC3.17□□□□□ -1.9
SSBP4Q9BWG4 AC211433.2-201ENST00000608433 387 ntBASIC3.17□□□□□ -1.9
SSBP4Q9BWG4 AC091152.2-201ENST00000591628 2569 ntBASIC3.17□□□□□ -1.9
SSBP4Q9BWG4 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.17□□□□□ -1.9
SSBP4Q9BWG4 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
SSBP4Q9BWG4 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms